Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0813 CTTTCCATGGCCACTGAGGCGACTGAAGCCACGACTAAGTTCCAGAATCCGGATTTCCGCCCGGTGCCGTCGCCTCCGGATTTCCATCCCGAGATTGTGGTGTCGGCCCACGATGGGCTTCGGTTCTGGGAGTTTATGGTTGCCGGGTCAGTCGCCGGGTCTGTTGAGCATATGGCGATGTTTCCGGTTGATACCGTGAAGACCCATATGCAAGCCCTTGGTTCTTGTCCAATTAAATCTGTCGGAGTTCGACAAGCGCTTCGGTCAATTTTGAAGTCGGAGGGACCTGCTGGTTTTTATCGCGGTATTGGTGCTATGGGTCTCGGAGCTGGACCAGCACACGCTGTGTATTTTACGGTTTATGAGAATTGTAAGAAGTTTTTCTCTGGTGGGGATCCTAATAATTCAGTTGCCCACGCCGTTTCTGGCGTCTGTGCGACGGTGGCGAGCGATGCCGTTTTTACACCAATGGATATGGTCAAGCAGAGGCTGCAGCTGAGTAATAGTCCTTACAAGGGAGTTTTGGATTGTGTCAAAAGGGTCCTTAGAGATGAGGGTTTAGGAGCATTTTACGCATCATATAGAACTACAGTGCTGATGAATGCACCATTTACTGCTGTGCATTTTTCAACATACGAGGCTGCAAAGAGAGGTTTGATGGAAGTTTCGCCAGAGATTGTAAATGATGAACAGTGGATTGTTCATGCTACGGCAGGGGCTGCTGCTGGAGCCTCAGCTGCATTTGTTACAACACCGCTCGATGTGGTTAAGACTCAATTACAATGTCAGGGCATATGTGGATGTGATAGATTCAAAAGTAGTTCGATCGGAGATGTCATTCGGACAATACTTAAGAAGGATGGGTATAGAGGGCTTATGAGGGGATGGATCCCAAGGATGCTTTTTCATGCTCCCGCAGCAGCTATTTGCTGGTCAACATACGAAGCGTTAAAATCCTTCTTCCAAGAGGTCAATGGCAGCAGTGGCGAAGTGACCTGA 999 48.95 LSMATEATEATTKFQNPDFRPVPSPPDFHPEIVVSAHDGLRFWEFMVAGSVAGSVEHMAMFPVDTVKTHMQALGSCPIKSVGVRQALRSILKSEGPAGFYRGIGAMGLGAGPAHAVYFTVYENCKKFFSGGDPNNSVAHAVSGVCATVASDAVFTPMDMVKQRLQLSNSPYKGVLDCVKRVLRDEGLGAFYASYRTTVLMNAPFTAVHFSTYEAAKRGLMEVSPEIVNDEQWIVHATAGAAAGASAAFVTTPLDVVKTQLQCQGICGCDRFKSSSIGDVIRTILKKDGYRGLMRGWIPRMLFHAPAAAICWSTYEALKSFFQEVNGSSGEVT 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5591391 5594572 - MC02g0693 Mch2g0813 681735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0813 332 Gene3D Mitochondrial carrier domain 170 332 IPR023395 -
Mch2g0813 332 MobiDBLite consensus disorder prediction 1 21 - -
Mch2g0813 332 PANTHER MITOFERRIN-1-RELATED 35 324 - GO:0015093(PANTHER)|GO:0031966(PANTHER)|GO:0048250(PANTHER)
Mch2g0813 332 Gene3D Mitochondrial carrier domain 26 169 IPR023395 -
Mch2g0813 332 ProSiteProfiles Solute carrier (Solcar) repeat profile. 134 218 IPR018108 -
Mch2g0813 332 ProSiteProfiles Solute carrier (Solcar) repeat profile. 230 320 IPR018108 -
Mch2g0813 332 SUPERFAMILY Mitochondrial carrier 38 316 IPR023395 -
Mch2g0813 332 FunFam Mitochondrial substrate carrier family protein 27 222 - -
Mch2g0813 332 MobiDBLite consensus disorder prediction 1 18 - -
Mch2g0813 332 PRINTS Mitochondrial carrier protein signature 45 58 IPR002067 GO:0055085(InterPro)
Mch2g0813 332 PRINTS Mitochondrial carrier protein signature 191 209 IPR002067 GO:0055085(InterPro)
Mch2g0813 332 PRINTS Mitochondrial carrier protein signature 239 261 IPR002067 GO:0055085(InterPro)
Mch2g0813 332 PRINTS Mitochondrial carrier protein signature 58 72 IPR002067 GO:0055085(InterPro)
Mch2g0813 332 PRINTS Mitochondrial carrier protein signature 149 167 IPR002067 GO:0055085(InterPro)
Mch2g0813 332 Pfam Mitochondrial carrier protein 134 221 IPR018108 -
Mch2g0813 332 Pfam Mitochondrial carrier protein 40 130 IPR018108 -
Mch2g0813 332 Pfam Mitochondrial carrier protein 230 323 IPR018108 -
Mch2g0813 332 ProSiteProfiles Solute carrier (Solcar) repeat profile. 40 127 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0813 Mch-Chr2:5591391 Mch2g1465 Mch-Chr2:10897456 1.07E-37 dispersed
Mch2g0813 Mch-Chr2:5591391 Mch9g0233 Mch-Chr9:1742166 3.07E-22 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0813 K15113 - csv:101215924 622.083