Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch2g0815 | GGTGTTTCGCCATGCGCGTCGTGTAAATTGCTGCGGCGGCGGTGCGGCAAGGACTGCGTATTCGCGCCTTATTTTCCGGCCGACGACCCCCACAAATTCGCCATTCTTCATAAGATCTTCGGCGCCAGCAATGTCAGCAAAATGTTGCAGAAGCTTCTAGAAGATCAAAGAGCAGATGCAGTGAGTAGTTTGGTATACGAAGCGAGTGTGAGAATGCGAGACCCAGTATACGGATGCGCCGGGGCAGTCTCTCATCTCCAAAATGCAGTGTCCCGACTGGAAATGCAGCTAGCCACGGCGCGGGCAGAGCTATTGAACTTTCAGATGCAGCAACAGCAGACTCCGACGAGCAGCCAAGTAGTGCAGCAAGAAGTTTATCATAAGCTTATTTCTTTCTCAAATGAAGATTGTTGTTCTTCTATCAATATTTTCGAGCAAGTGGAAGATTACAACTCCTTGTGGAGT | 465 | 49.46 | GVSPCASCKLLRRRCGKDCVFAPYFPADDPHKFAILHKIFGASNVSKMLQKLLEDQRADAVSSLVYEASVRMRDPVYGCAGAVSHLQNAVSRLEMQLATARAELLNFQMQQQQTPTSSQVVQQEVYHKLISFSNEDCCSSINIFEQVEDYNSLWS | 155 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 5603779 | 5604966 | + | MC02g0695 | Mch2g0815 | 681737 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch2g0815 | 155 | ProSiteProfiles | LOB domain profile. | 3 | 104 | IPR004883 | - | |
Mch2g0815 | 155 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 3 | 122 | - | - | |
Mch2g0815 | 155 | Coils | Coil | 83 | 110 | - | - | |
Mch2g0815 | 155 | Pfam | Lateral organ boundaries (LOB) domain | 4 | 101 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch2g0815 | Mch-Chr2:5603779 | Mch4g0045 | Mch-Chr4:317030 | 4.11E-50 | dispersed | |
Mch1g2070 | Mch-Chr1:20064477 | Mch2g0815 | Mch-Chr2:5603779 | 2.13E-34 | transposed | |
Mch2g0815 | Mch-Chr2:5603779 | Mch9g1433 | Mch-Chr9:16724604 | 6.03E-59 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
42915 | PF03195 | LOB | 5.50E-39 | No_clan | Mch | TF |
Pathway information
