Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0853 CTTTTTAGTTTCCTTTCATCCTTGATGATTATGGCGCCAACTGCCGGATCTTTCTCCACTAAATTTCTTGCTCTTTTACTCCTTATTGTCCATGTCGGCTGCTTCCTTCTAACCTCCGCCGATCACCGCCGCCGCCACCGGAACCAGCCCTCCAAGAAGCGCAGAGTCTCCCCTGTTTCCAGCCCTGCTCCGGCTCCGACGCCGTCGTGTCTCAAGCCACACAAAGCCCTCTCCTCCTCCATTTCATTTCTCAAACGAATCTTCTCCTCCAAAACCTGCAAAATGGCAATCGAAACGACTCGCCCCTCCACTCCGGCCAGGTCGTCGCAGCACTCGATCGTCACGCTGATCCAGCCGGAGATTCAGATTCCGATTCCGCCGTCGGAAACTCCCAACAAGAGTCCTTCCGGCGGAGCCTCTCAGGATTCCGACATGATCACGGCGGAGAATCAATTCTTTCCCCTCCGCAACGACATCTTCCCCTGCACGGCATGCGGCGAGATTTTCCCCAGGCCTCAATTACTCGAGCAGCACCAATCGGCGAAGCACGCCGTGTCGGAGCTCGCCGATTCGGATTCCGGCAAGAACATCGTCCGGATCATATTCGAAACCGGATGGACGAGCAGAGAAAAAAGCCCTAAAATCGTTCGAATCCTCAAAATCCACAACAGCCAGAAGATTCTCTCCCGATTCGAGGAGTACAGAGAGTCGGTGAAGGCCAAAGCGGCGCGGAACGGCGGCGTAAAGCGGCGGGACGAGCGTTGCATCGCCGACGGGAACGAGCTCCTGAGGTTCCACTGCTCCATGTTTCTGTGCGATTTAGGGCAGAATGGGAATTCCAGTATTTGCGGGCAGCAATTCTGCAGCGTCTGCGGTATAATCAAATCGGGATTCTCCCACAAGTTGGACGGAATTTCCACGCTGTCGACCAGCTGGAGGGCACACGTGGCCATCCCCGAGGACGTGGAAGAGGAGTTCAAGTTCATGAACGTGAAGCGGGCGATGTTGGTTTGCCGGGTCGTGGCGGGTCGGGTCGGGTGCGACGCGGAAGAGCCGGAGAAGGATGGCGGCGGCGGCGGATTCGACTCCGTCGTCGGGAGGAGTGGGAGTGGGGCCCAAACCACGTTGGACGAAGAAGAGCTATTGGTCTTCAATCCGAGAGCTGTGCTCCCCTGCTTCGCGATCGTCTACCAAATC 1197 56.81 LFSFLSSLMIMAPTAGSFSTKFLALLLLIVHVGCFLLTSADHRRRHRNQPSKKRRVSPVSSPAPAPTPSCLKPHKALSSSISFLKRIFSSKTCKMAIETTRPSTPARSSQHSIVTLIQPEIQIPIPPSETPNKSPSGGASQDSDMITAENQFFPLRNDIFPCTACGEIFPRPQLLEQHQSAKHAVSELADSDSGKNIVRIIFETGWTSREKSPKIVRILKIHNSQKILSRFEEYRESVKAKAARNGGVKRRDERCIADGNELLRFHCSMFLCDLGQNGNSSICGQQFCSVCGIIKSGFSHKLDGISTLSTSWRAHVAIPEDVEEEFKFMNVKRAMLVCRVVAGRVGCDAEEPEKDGGGGGFDSVVGRSGSGAQTTLDEEELLVFNPRAVLPCFAIVYQI 399
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5831169 5832365 - MC02g0727 Mch2g0853 681775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0853 399 MobiDBLite consensus disorder prediction 124 143 - -
Mch2g0853 399 MobiDBLite consensus disorder prediction 43 73 - -
Mch2g0853 399 Gene3D - 202 399 - -
Mch2g0853 399 ProSiteProfiles Zinc finger C2H2 type domain profile. 160 188 IPR013087 -
Mch2g0853 399 ProSitePatterns Zinc finger C2H2 type domain signature. 162 183 IPR013087 -
Mch2g0853 399 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 81 397 - -
Mch2g0853 399 SUPERFAMILY ADP-ribosylation 186 398 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0853 Mch-Chr2:5831169 Mch4g1743 Mch-Chr4:20524939 3.79E-61 dispersed
Mch2g0853 Mch-Chr2:5831169 Mch10g1143 Mch-Chr10:8567434 1.89E-55 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
42918 None None None None Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0853 - - - 0.0