Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0902 ATGGGTAACGGGATTGGGAAGCTCGGCGTTTGCTTCACCGGAGTTGGGGAGAATCGCCGGCGGCCGGATATTTCCGTTCTGCTATCGAATCCTCTCGATGAAGGTCTCGGCCACTCGTTCTGCTATGTCCGGCCGGACCCTTTGAGGGTTTCTTTGTCCAAAGTTCATTCGGAGGAAACCACCACTTTCCGATCAATCTCCGGCGCTTCTGTAAGTGCCAACACATCGACGCCCCTCTCCACGGCTCTTATCGATCTCTATTCCTACAATAGCATTGATCGAGCGGCGGCTTTTGAGAGCTCCACTTCGTTTGCTTCGATCCCTTTGCAGCCGATCCCTCGAAACATGATCAATTCGGGGCCGATTTCGGGGAATTTCAGTGGAATCCCATGTTCCGGGCCTCTGGAGAGAGGGTTTTTATCGGGTCCAATTGAGCGAGGGTTTATGTCGGGTCCACTGGATCGGGGGATTTTTTCGGGTCCTCTCGATAATTCTGCGTCCGGTGAGTTTCAGAGAAGTTTCTCTCATGGAGGAGGGTTCGGTTCCAGATCTAGATCCAGAAAAAGCCGCTTAATCCGGATTCTTCGAAGCGCGATTTCGAAGTCGATTTATCGAGGGCAGAATTCCATTGTTGCCCCGATTAAAGCGGTTAAAGAACCCGATTGGATCGTCATGCCCGAGAAGCATAACGAAAATTTGACTGTGAGCAGCTTGAATTTCAGTAGTGAGGGAAGTCTAGAGGATGACGATTCGATGGAGAGCCAGAATCTGCAGTGGGCTCAGGGGAAAGCAGGGGAAGATCGAGTTCATGTTGTGGTTTCCGAAGAACATGGGTGGGTTTTCGTAGGGATTTATGATGGATTCAACGGCCCAGATGCTCCCGATTATCTCTTGTCGAATTTATACTCCTCCGTTCACAAGGAGCTCAAAGGTTTGTTATGGGATGAGAAGCTCGATTCCGCCGGAGTCGCCCCTCCGGCCACTTCCCCTGTACGATCTGAGAATCCTTATTCAGAAACAAGAGATTCTTTAGGGATTAATGACAGTGATTCGGAGAGAAATTGGGGGAGTGATGCTTGTTCTCATTGTGTGGAACAAGAAAATCATCCTTGCGCTAGTGGAGATGGAAATTCTGGATCGAATTCTCGGAGAAGGAAAGGTAAGAACTCAAGAGGGAAATTTCGAGGAGCCGCCGAGAAGTGGGAGGATAATCAGCGGCGGTGGAAGTGCGAATGGGACCGGGAAAGATTAGAACTCGATCGGAGGTTAAAGGAGCAACTGAATCGATCCGGGTCCAACGGTTCGAGGTCGATTAATAATTCGGATGTCCTCAAAGCTCTGTCTCAGGCATTGAAGAAAACAGAGGAGGCCTATTTGGATATTGCAGACAAGATGCTTGTGGAAAATCCTGAACTGGCTTTGATGGGTTCGTGTGTGCTTGTGATGCTTATGAAGGGAGACGATGTTTATGTGATGAATGTTGGTGACAGCCGGGCTGTTTTAGCGCAAAAGGCCGAGCCCGATTATTGGCTCGGGAAGATTCGGAACGACTTGGAAAAGATCAATGAAGAACCAGTTCATGACATTGAAGCGTTAGATGGTGATAGAGGATTCACCCCCGCCAACCTTACTGCTTTTCAGCTTTCCGTGGATCACAGCACCAGTGTTGATGAGGAAGTTCAGAGAATTAAAAATGAACACCCCGATGATGCTGGTGCAGTGATGAACGACCGTGTGAAAGGCTCGTTGAAGGTTACCCGTGCGTTCGGTGCTGGTTTTCTCAAACAGCCTAAATGGAACAATGCACTATTGGAGATGTTCCGAATCGACTACGTCGGGAGATCGCCATACATCAATTGTATACCATCTCTCTACCACCACAGATTAGGACCAAAGGACAGGTTTTTGATACTATCATCTGATGGACTCTACCAGTACTTCACAAACGAAGAAGCTGTTTCTGAAGTCGAACTTTTCATCACATTGCAACCCGAGGGAGACCCGGCTCAACATCTGGTTGAACTACTTCTGTTTCGGGCTGCCAAGAGAGCTGGTATGGATTTCCACGAATTACTCGAAATACCGCAGGGCGACCGGAGGAAGTACCATGACGATGTATCGATCATTGTAATTTCATTAGAAGGGAGGATTTGGAGATCATGTGTATAA 2169 48.55 MGNGIGKLGVCFTGVGENRRRPDISVLLSNPLDEGLGHSFCYVRPDPLRVSLSKVHSEETTTFRSISGASVSANTSTPLSTALIDLYSYNSIDRAAAFESSTSFASIPLQPIPRNMINSGPISGNFSGIPCSGPLERGFLSGPIERGFMSGPLDRGIFSGPLDNSASGEFQRSFSHGGGFGSRSRSRKSRLIRILRSAISKSIYRGQNSIVAPIKAVKEPDWIVMPEKHNENLTVSSLNFSSEGSLEDDDSMESQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFNGPDAPDYLLSNLYSSVHKELKGLLWDEKLDSAGVAPPATSPVRSENPYSETRDSLGINDSDSERNWGSDACSHCVEQENHPCASGDGNSGSNSRRRKGKNSRGKFRGAAEKWEDNQRRWKCEWDRERLELDRRLKEQLNRSGSNGSRSINNSDVLKALSQALKKTEEAYLDIADKMLVENPELALMGSCVLVMLMKGDDVYVMNVGDSRAVLAQKAEPDYWLGKIRNDLEKINEEPVHDIEALDGDRGFTPANLTAFQLSVDHSTSVDEEVQRIKNEHPDDAGAVMNDRVKGSLKVTRAFGAGFLKQPKWNNALLEMFRIDYVGRSPYINCIPSLYHHRLGPKDRFLILSSDGLYQYFTNEEAVSEVELFITLQPEGDPAQHLVELLLFRAAKRAGMDFHELLEIPQGDRRKYHDDVSIIVISLEGRIWRSCV 722
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6129808 6136063 + MC02g0772 Mch2g0902 681824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0902 722 Coils Coil 444 464 - -
Mch2g0902 722 Pfam Protein phosphatase 2C 545 663 IPR001932 -
Mch2g0902 722 Pfam Protein phosphatase 2C 436 506 IPR001932 -
Mch2g0902 722 ProSiteProfiles PPM-type phosphatase domain profile. 249 713 IPR001932 -
Mch2g0902 722 MobiDBLite consensus disorder prediction 321 353 - -
Mch2g0902 722 PANTHER PROTEIN PHOSPHATASE 2C 242 713 IPR015655 GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0006470(PANTHER)
Mch2g0902 722 MobiDBLite consensus disorder prediction 368 398 - -
Mch2g0902 722 Gene3D - 226 717 IPR036457 -
Mch2g0902 722 MobiDBLite consensus disorder prediction 331 353 - -
Mch2g0902 722 CDD PP2Cc 439 713 IPR001932 -
Mch2g0902 722 SMART PP2C_4 250 711 IPR001932 -
Mch2g0902 722 SUPERFAMILY PP2C-like 263 714 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0902 Mch-Chr2:6129808 Mch5g0702 Mch-Chr5:4757016 1.33E-63 dispersed
Mch10g1634 Mch-Chr10:16478906 Mch2g0902 Mch-Chr2:6129808 4.62E-151 transposed
Mch1g0718 Mch-Chr1:11098233 Mch2g0902 Mch-Chr2:6129808 2.40E-242 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0902 - - - 0.0