Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch2g0909 | ATGGCTCACTCTTCTCTTCCAATCTTTTTAGATCCCCCAAATTGGCAGCAGCAATCGAATCAGGCACCGGAAGCAAATGATCATGAAGACCCACGTCAGATTCCGGCGTTTCTGCCAGCGCCGGCGGTTCATGGCGCCGGCGCGGGGTCTATCCGGCCGGGTTCTATGGCGTACAGAGCGCGGCTGGCGATGATTCCGCAGCCGGAGGCGGCGCTGAAATGCCCGCGCTGTGATTCCACAAACACCAAATTTTGCTACTTCAATAACTACAGCCTTTCTCAGCCGCGGCACTTCTGTAAAACCTGCCGCCGGTACTGGACCCGCGGCGGCGCTCTGAGAAACGTCCCCGTCGGAGGAGGCTTCCGGAAGAACAAGAAGAAGAAGAAAAGTAGTAACCGATCCAAGTCCCCCACTGCCACTCAAGCTCAAATGGGTAATTCGAGAGGAAGTGGTGGCGCAATAATCTCAAACATAGAGAACCCCACAATGGGCCATTTCCCTCGATTCGGAGGGGGAAACTCAGGCCTCAACTTCACCGGAATTCATCTCAATTCCGGCCGCCAAGATCATCATCAATTGGATCATCATCAATGGCGTCCACAGCAACATCCGCCGTTCATCGTCGCCGGACTCGAACCTCCGCCGCCACCCGGATACCCATTAAACATTATTCAAACCCAAGTTAACAACTTTGGCGCCGGCCCTAACTCATCACCATCATCAGCATCAGCAGCAGCTCTACAATACTGTCACCAACAACTTCAGAATCTGACACCCTTTCCGAGGATTCCCATGAAAAACGAGGAACAAATCCAAAGCCAAAGCCAAAACCAAGAACAAGGAATAATAATGTCTAATTTCTTACGACCAGATCATGATCACCAGAACAACCACCAATTGATGTGGCCGTGTGATCATCAAAATTCCTGGACAGATCATCATTTGTCGGCTCTCAGCTCTTCTTCCAGCACCCATCTCTTGTAA | 984 | 51.52 | MAHSSLPIFLDPPNWQQQSNQAPEANDHEDPRQIPAFLPAPAVHGAGAGSIRPGSMAYRARLAMIPQPEAALKCPRCDSTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGFRKNKKKKKSSNRSKSPTATQAQMGNSRGSGGAIISNIENPTMGHFPRFGGGNSGLNFTGIHLNSGRQDHHQLDHHQWRPQQHPPFIVAGLEPPPPPGYPLNIIQTQVNNFGAGPNSSPSSASAAALQYCHQQLQNLTPFPRIPMKNEEQIQSQSQNQEQGIIMSNFLRPDHDHQNNHQLMWPCDHQNSWTDHHLSALSSSSSTHLL | 327 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 6180463 | 6184345 | - | MC02g0779 | Mch2g0909 | 681831 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch2g0909 | 327 | PANTHER | DOF ZINC FINGER PROTEIN DOF1.4-RELATED | 66 | 266 | IPR045174 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch2g0909 | 327 | Pfam | Dof domain, zinc finger | 71 | 126 | IPR003851 | GO:0003677(InterPro)|GO:0006355(InterPro) | |
Mch2g0909 | 327 | MobiDBLite | consensus disorder prediction | 113 | 157 | - | - | |
Mch2g0909 | 327 | ProSiteProfiles | Zinc finger Dof-type profile. | 72 | 126 | IPR003851 | GO:0003677(InterPro)|GO:0006355(InterPro) | |
Mch2g0909 | 327 | MobiDBLite | consensus disorder prediction | 134 | 157 | - | - | |
Mch2g0909 | 327 | MobiDBLite | consensus disorder prediction | 10 | 24 | - | - | |
Mch2g0909 | 327 | ProSitePatterns | Zinc finger Dof-type signature. | 74 | 110 | IPR003851 | GO:0003677(InterPro)|GO:0006355(InterPro) | |
Mch2g0909 | 327 | MobiDBLite | consensus disorder prediction | 10 | 35 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch2g0909 | Mch-Chr2:6180463 | Mch4g2138 | Mch-Chr4:23362067 | 1.37E-48 | dispersed | |
Mch1g0729 | Mch-Chr1:11160266 | Mch2g0909 | Mch-Chr2:6180463 | 9.24E-43 | wgd | |
Mch2g0909 | Mch-Chr2:6180463 | Mch5g1836 | Mch-Chr5:18631446 | 2.22E-46 | wgd | |
Mch2g0909 | Mch-Chr2:6180463 | Mch9g1562 | Mch-Chr9:17923634 | 4.52E-52 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
42922 | PF02701 | zf-Dof | 7.70E-33 | No_clan | Mch | TF |
Pathway information
