Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0943 ATGCCGCGGAAGGGAATGAGGAGCGTTTTCTTCAGATCGCCAACTCCGAGCACGCCGTCGTCGCCGTTGTCTCACTCGCCGCGCCACACTTTATCGGATTCCATGGTGGAAGAGAATATTGAAGTTGCGGAATCGTGTGTCGCAAAGTGGGCCGCTGATGCCGTTACTGCTGGTTCCTTGTTTCAAGGGGAAGACCGTGATGAAGCTCGACAGTTTATCAAGGTAGTTAAGGACTTGCATGCCGCGATGCACTGCATCGTTTCTCGGGATCCGACATCGGAGAAGCTTGTGCGAGCTCATGATTTGATGAGGATTGCGATGGAGAGGCTTCAGAAAGAGTTTTACCAGATTTTGTCTGCTAATCGGGAGTATTTGTATCCGGAATCGGTTTCCAGCGTTCAATCGCCGGTAACGGTTTCGGCTAGATCGAGTACCTCTGATTTCGAGGCGGAATCGGAAGATGAATTCTGTTTTGCTAACGAATCTGCTATTGCTGAGGTAGAGCGGGTTTCGATGTCTGCCATGGCGGATTTGAAAGCAATTGCGGATTGTATGATCTCCACCGGTTATGGCAAAGAATGCGTCAAGGTTTATAAAATCGTAAGGAAATCGATAATTGACGAGAGTCTCTACAATCTTGGAGTTGAGAAATTGAGCATTTCGAAAGTCCAGAAGATGGATTGGGAGGTTCTGGAGATCAAGATCAGAAGCTGGTTGAAAGCTGTGAAACCGGCAGTGAAATCTCTGTTCGAAGGGGAGAGAATCCTTTGCGATCACGTCTTCTCGGCTTCCGTGTCCATCAGAGAAACGTGCTTCGCTCAAATTTCCAAAGACGGCGCGATGACTCTTTTTGGATTCCCAGAATTGGTCGCAAAGTACAAAAAAACTCCAGAGAAAATTTTCATTACGCTGGATCTATACGAGGCCATAGCCGACCTCTGGCCGGAGATCGATTACATTTTCTCATCCACAGCGACGTCAATGGTCCAATCACAAGCAGTCAATTCACTCGTCAAACTCGGGGACAACATTCGCACATTGTTCGCTGATTTTGAAATGGCTATTCAGAAAGAATCATCCAAAGCGCCGGTTCCGAGTGGCGGAGTTCATCCACTCACTCGCTACGTGATGAACTACATCTCGTTCCTCTCCGATTACAGTGGAATACTCAACGACATAGTCGCCGATTGGCCTTTAGCGACAAAAGTAATGTTGCCGGAATCATACTACGGGCCGCCGAAACAGGATGATAGTCCGATTACCTTACGATTCGCCTGGCTGATTCTGGTTCTCCTCTGCAAACTCGACGGCAAAGCAGAGCATTACAACGACGTCGCACTCTCCTACTTGTTCTTAGCCAACAATCTCCGATACGTCGTCGACAAAGTCCGATCATCGAACCTGAAATTCCTTCTCGGCAACGACTGGATCGAGAGGCACGAATCGAAGATCAAACTCTACACCTCCAAATACAGGCGCATAGGATGGAGCGAAGTGTTCTCGTCGCTGCCGGCCGACGTCGCGGCTGATATCTCGCCGGAAAAAGCGAGAGAATCGTTCGGAAATTTCAACAGAGCTTTTGAAGAGACCTACAGAAAACAGACCTCGTGGATCGTGCCCGATCAGAAGCTTCGAGATGAAATAAAGATCTCGTTGGCGAAGGAGATTGGGTCTTTATACGGCGAGTTTTACGCGAAGCATCGGTTGCGTATGGGGCGGGTTTACGGGTCGGGCTCGATGGTCCGACTTTCCCCCGATGATTTAGGAAATTATATTTCGGATCTCTTCTACGGGTCTGGATCCGGAAGTATAGGGAGCGTTTCCTCGTCTTATTCGTCGTCCAATTCCTCGCCGACTTCTCGAGGGAGGGTCGTACGT 1878 49.09 MPRKGMRSVFFRSPTPSTPSSPLSHSPRHTLSDSMVEENIEVAESCVAKWAADAVTAGSLFQGEDRDEARQFIKVVKDLHAAMHCIVSRDPTSEKLVRAHDLMRIAMERLQKEFYQILSANREYLYPESVSSVQSPVTVSARSSTSDFEAESEDEFCFANESAIAEVERVSMSAMADLKAIADCMISTGYGKECVKVYKIVRKSIIDESLYNLGVEKLSISKVQKMDWEVLEIKIRSWLKAVKPAVKSLFEGERILCDHVFSASVSIRETCFAQISKDGAMTLFGFPELVAKYKKTPEKIFITLDLYEAIADLWPEIDYIFSSTATSMVQSQAVNSLVKLGDNIRTLFADFEMAIQKESSKAPVPSGGVHPLTRYVMNYISFLSDYSGILNDIVADWPLATKVMLPESYYGPPKQDDSPITLRFAWLILVLLCKLDGKAEHYNDVALSYLFLANNLRYVVDKVRSSNLKFLLGNDWIERHESKIKLYTSKYRRIGWSEVFSSLPADVAADISPEKARESFGNFNRAFEETYRKQTSWIVPDQKLRDEIKISLAKEIGSLYGEFYAKHRLRMGRVYGSGSMVRLSPDDLGNYISDLFYGSGSGSIGSVSSSYSSSNSSPTSRGRVVR 626
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6345832 6347709 + MC02g0801 Mch2g0943 681865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0943 626 Gene3D Exocyst complex component Exo70 46 603 - -
Mch2g0943 626 MobiDBLite consensus disorder prediction 11 30 - -
Mch2g0943 626 SUPERFAMILY Cullin repeat-like 59 596 IPR016159 -
Mch2g0943 626 Pfam Exocyst complex component Exo70 N-terminal 40 119 - -
Mch2g0943 626 FunFam Exocyst subunit Exo70 family protein 56 603 - -
Mch2g0943 626 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 598 IPR004140 GO:0000145(InterPro)|GO:0000145(PANTHER)|GO:0006887(InterPro)|GO:0006887(PANTHER)
Mch2g0943 626 MobiDBLite consensus disorder prediction 1 30 - -
Mch2g0943 626 MobiDBLite consensus disorder prediction 607 626 - -
Mch2g0943 626 Pfam Exo70 exocyst complex subunit C-terminal 237 594 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0943 Mch-Chr2:6345832 Mch5g1815 Mch-Chr5:18484947 6.15E-209 dispersed
Mch3g0389 Mch-Chr3:6772817 Mch2g0943 Mch-Chr2:6345832 9.08E-235 transposed
Mch1g0755 Mch-Chr1:11350685 Mch2g0943 Mch-Chr2:6345832 1.30E-114 wgd
Mch2g0943 Mch-Chr2:6345832 Mch5g1814 Mch-Chr5:18477719 1.36E-207 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0943 K07195 - csv:101212978 970.304