Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0950 AGGGAAAGGTTTGGATTACTCTTCTGGGTTTTGTTAATTTCGTTGCCGCCTTGCTTTTTAAGTGTGTTTCAACCGGTAGACAATTACCTTGTTGACTGTGGATCGTCTACAAATGTCTCGGTGGGTAGCCGTGTTTTCATGGCCGATAATTTGGGGTCAAAGTTGCTTTCTACTCCGAAAGACATTTTGGCTAATTCGACTTCTATTTCCGCCTCTTCTTCTAACAATTCCTTGCTGTTCGAAACGGCTAGAATCTTCACTGGATTGTCGAAATTCAAGTTTCCAATCAAAAGTACTGGAAGGCACTGGATCCGTCTCTATTTCCTTCCATTTGTGTTCTCTGGATTCAATATGAGTGCTGCAAATTTTAGTGTTTCCACCCAAAACTATGTTCTGTTGCGAGATTTAGTTGTGGAGAAGGACCCTGTGGTCAAAGAATTCTCTGTGAACGTAACATCAGATACCCTTGAAGTTATTTTTGCTCCTGTTAATGGCTCCTTTGCATATCTGAATGCCATTGAAGTCGCTTCTGTTCCTGACATTCTCATTCTCGACGAAGCCAATATTTTAGAACCAGCTGGTAAATTTCAAGGGCTGTCTACTCTGACATATGAGACAGTTGCTAGGGTGAATATGGGTGGCCCAAAAGTTGCTGCTGATAGTGATCCTCTTTCGCGAAATTGGGTTTCAGATGGAAGCTTTCTAGTTAATCCGAATTCTGCCACAAGTTTCTCTAACATTGCAGCTGTTAAATACAGTGATGATGGGGCAGCACCGGAGATTGCTCCCAATGTTGTCTATGGTACACTCACCCAGATGAACTCGAAGGGTGATCCGAACAGCAATTTCAACGTGACTTGGCAGTTTAAAGTGGATCCTGGCTTTCAGTACCTTGTTCGGTTTCACTTCTGTGACATTATGAGTAAATCTCTTCACCAACTTTATTTCAATGTTTACATTGATTCGTGGCTGGTCATTCACGATCTAGATCTTAGTGCTGCTCTTAGTAATAGATTGGGCACTCCATACTATATGGATTCTGTCACAGGATTGATCAAGAATGACATTCTTCATGTGAGTATTGGCCCATCAAATTTAGCTAATGTGTATCCAAATGCCATCCTAAATGGTCTGGAGATCCTGAAAATGAACAACTCTGTCGGTAGTCTTAGTGGGGAAGACTCTGTACTAAGTTTTCCGGACTCTACTTCTTCAAATAAGCATGTTGGTGTCATTGTGGGCGTGAGTGTTGGGGCATTTGTAGCAGCCATATTGGTTGGCATTCTGTTGATGTTGCACAGACGAAAAAGAAAGACGACTCGTCCAGCTCCATCGAAGACATGGATTTCAATATCCACTGCTGGAGGAAATTCACACACTATGGGCAGTAAATACTCGAATGGGACGATCACGAGTGCTGCTTCCAACTATGGGTACCGTATACCTTTTGCAGCAGTTCAAGAGGCTACAAATAACTTTGATGAGAGCTGGGTTATCGGTATTGGTGGGTTTGGGAAAGTATACAAAGGAGTTTTAAACGATGGCACCAAAGTTGCTGTAAAGAGGGGAAATCCACGTTCCCAACAAGGGCTGGCAGAGTTTCAAACTGAAATCGAGATGCTATCGCAGTTCCGCCATCGTCATCTTGTTTCATTGATTGGGTACTGTGACGAGAGGAATGAGATGATATTGATTTATGAGTATATGGAAAATGGTACCCTGAAGAGTCATCTGTATGGTTCTGATTACCCGAGTATGAGCTGGAAGGAGAGACTTGAGGTCTGCATTGGAGCTGCTAGAGGACTTCATTACCTTCACACCGGTTACGCCAAACCAGTCATTCATCGCGACGTGAAGTCTGCGAATATTTTACTTGACGAAAATCTCATGGCAAAGGTTGCCGACTTTGGGCTTTCAAAGACAGGGCCTGAAATAGACCAAACCCATGTCAGTACAGCTGTGAAAGGGAGTTTTGGGTACCTGGATCCTGAATATTTCAGGAGGCAACAATTGACTGAGAAATCAGATGTTTATTCTTTTGGAGTTGTCTTGTTTGAAGTCCTTTGTGCAAGGCCTGTCATAGATCCAACCCTTCCTAGAGAAATGGTGAACTTGGCTGAATGGGCAATGAAATGGCAGAAGAGAGGGCAGCTGGACCAAATCATTGATTCTTCTCTAGTTGGAAAAGTTAGACCAAATTCTCTTAGGAAGTTTGGAGAAACTGCTGAAAAATGCTTGGCTGATTTCGGAGTTGACAGGCCATCTATGGGAGATGTGTTATGGAATTTGGAGTACGCGCTTCAGCTACAAGAAGCTGTCATTGAA 2325 43.01 RERFGLLFWVLLISLPPCFLSVFQPVDNYLVDCGSSTNVSVGSRVFMADNLGSKLLSTPKDILANSTSISASSSNNSLLFETARIFTGLSKFKFPIKSTGRHWIRLYFLPFVFSGFNMSAANFSVSTQNYVLLRDLVVEKDPVVKEFSVNVTSDTLEVIFAPVNGSFAYLNAIEVASVPDILILDEANILEPAGKFQGLSTLTYETVARVNMGGPKVAADSDPLSRNWVSDGSFLVNPNSATSFSNIAAVKYSDDGAAPEIAPNVVYGTLTQMNSKGDPNSNFNVTWQFKVDPGFQYLVRFHFCDIMSKSLHQLYFNVYIDSWLVIHDLDLSAALSNRLGTPYYMDSVTGLIKNDILHVSIGPSNLANVYPNAILNGLEILKMNNSVGSLSGEDSVLSFPDSTSSNKHVGVIVGVSVGAFVAAILVGILLMLHRRKRKTTRPAPSKTWISISTAGGNSHTMGSKYSNGTITSAASNYGYRIPFAAVQEATNNFDESWVIGIGGFGKVYKGVLNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDERNEMILIYEYMENGTLKSHLYGSDYPSMSWKERLEVCIGAARGLHYLHTGYAKPVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPTLPREMVNLAEWAMKWQKRGQLDQIIDSSLVGKVRPNSLRKFGETAEKCLADFGVDRPSMGDVLWNLEYALQLQEAVIE 775
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6409779 6412103 + MC02g0808 Mch2g0950 681872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0950 775 FunFam Receptor-like protein kinase FERONIA 569 775 - -
Mch2g0950 775 Gene3D Transferase(Phosphotransferase) domain 1 569 773 - -
Mch2g0950 775 PANTHER OS07G0166700 PROTEIN 480 771 IPR045272 GO:0004672(PANTHER)|GO:0004714(InterPro)|GO:0005886(PANTHER)|GO:0006468(InterPro)|GO:0009506(PANTHER)|GO:0046777(PANTHER)
Mch2g0950 775 ProSitePatterns Protein kinases ATP-binding region signature. 499 521 IPR017441 GO:0005524(InterPro)
Mch2g0950 775 SUPERFAMILY Protein kinase-like (PK-like) 471 764 IPR011009 -
Mch2g0950 775 FunFam Putative receptor-like protein kinase 28 179 - -
Mch2g0950 775 Gene3D Phosphorylase Kinase; domain 1 456 568 - -
Mch2g0950 775 ProSitePatterns Serine/Threonine protein kinases active-site signature. 613 625 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch2g0950 775 Gene3D - 202 385 - -
Mch2g0950 775 Gene3D - 28 178 - -
Mch2g0950 775 FunFam receptor-like protein kinase FERONIA 457 568 - -
Mch2g0950 775 Pfam Malectin-like domain 31 382 IPR024788 -
Mch2g0950 775 ProSiteProfiles Protein kinase domain profile. 493 766 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g0950 775 SMART serkin_6 493 766 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g0950 775 CDD STKc_IRAK 499 764 - -
Mch2g0950 775 FunFam Receptor-like protein kinase FERONIA 203 385 - -
Mch2g0950 775 Pfam Protein tyrosine and serine/threonine kinase 498 690 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g1245 Mch-Chr1:14733949 Mch2g0950 Mch-Chr2:6409779 4.73E-152 dispersed
Mch2g0950 Mch-Chr2:6409779 Mch6g0255 Mch-Chr6:1654735 8.52E-241 dispersed
Mch2g0950 Mch-Chr2:6409779 Mch9g0371 Mch-Chr9:2752302 7.90E-235 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77217 PF12819 Malectin_like 2.90E-28 CL0202 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0950 - - - 0.0