Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch2g0963 | ATGGAGCCGTTGGATAAAGCTCAGCCCAAATCCTCCCCTCTCGCGCCATTTCCTAGGGATTCTCGGGGCTCGCTCGAGGTTTTCAATCCCTCCTCCACGTACTCCTCCCGCTCCATCAATTCGATTCCGCGGCCGAATCCTGCGTGGCCCAATTGGGTGGAGCCTGCGCGTACCAGCTCCGAATCGGACTCGTCCCGCCTCGCAGCCAAACCGGCCGCCGGAAAAACCGCCGACGAGATTACATCATGGATGGCCTTCAAGGACGCCAACCCTTCCCAGCCGTCGTCGCCGCTCGCTCAGAAGACTATCTCCGCGATTCTCAGCGAAAAATCTCCGGCCGTGAGGGCGCAATCGCCGGACGAAGTCGGTTCCGCCGCCCAACGCGCCGCCGAGTGGGGACTGGTGCTGAAAACCGACACGGAGACTGGGAAGCCTCAGGGCGTCGGAGTTCGAACTTCCGGAGGCGATGAACCTAACGCCAAACAGGAGAATTCGAGAAGAACTTCGAATAACTCGGTGCGGAGTTCGGGCGACATGTCGGACGACGGGGCGCGAGAGCGGGGGATTCCGAGAGTGTCCGAGGACTTGAAGGACGCTCTGTCGACATTTCAGCAAACATTTGTGGTTTCGGATGCAACGAAACCGGATTATCCGATTATGTATGCTAGTGCCGGATTCTTCAAGATGACGGGCTATACATCCAAGGAGGTTATTGGAAGAAATTGTCGGTTTTTACAGGGTGCAGATACAGACCCAGAAGACGTGGCCAAGATCCGAGAGGCTTTACAGGCGGGGACGAGTTACTGTGGGAGGTTGTTGAATTATAAGAAAGATGGGACCCCGTATTGGAACCTACTTACTATTTCACCTATCAAAGATGATGACGGGAAAGTTCTCAAGTTTATTGGAATGCAAGTGGAGGTGAGCAAACACACAGAGGGCTTCAAAGATAAGATGGTCCGTCCCAATGGCTTGCCAGAATCCTTGATTCGTTATGATGCCCGGCAAAAAGAGATGGCTACCAGTTCAGTAACGGAACTCGTGCAGGCGGTGAAAAGGCCTCGGTCTCTAAGCGAATCCAGGCCTCGAGCTCTAAGTGAATCTATGAGCCGCCGGTTAGTTAGAAAATCCGGCGGCGACGACCTTAGAGTTGAAGCTGCTGCCATGGTTAGGCGAAAGTCAGAGAGCGCCGCAGCTCCGACTGGACGAAACTCACATGGGAGAAGTAGAAGGTCGATGCAGCGTATAAGTGAGCTGCCGGAGAAGAAACCCAAGAAATTCGGCCGTCGTTCATTTATGGGGATTAAGAGGAAAAGTCGGTCAAATGTTGAAAGCTTTGACATTGACATTGAAGATGGCTCAGACGACGATGATGAGACAGATGACGATGAGAGGCCAGATAGCGTTGATGACAAAGTAAGGCAGAGAGAAATGAGGAAGGGTATTGATTTAGCTACTACCCTCGAACGTATAGAGAAAAACTTTGTCATTACTGATCCCCGATTGCCTGACAATCCCATTATATTTGCTTCTGATAGCTTCCTGGAACTAACCGAGTATAGTAGAGAAGAAATCTTGGGAAGAAATTGCAGGCAGTTTCTGCAAGGACCTGAAACCGATCGAGCCACCGTAAGGAAAATAAGAGATGCAATCGACAACCAAACGGAAGTTACAGTGCAACTTATTAACTACACGAAAACTGGTAAGAAGTTTTGGAACCTGTTTCATCTACAGCCTATGCGTGATCAGAAGGGAGAAGTCCAGTATTTTATTGGAGTACAACTCGATGGCAGTCAGCATGTGGAACCGCTAAGCAATTGCATACCGCAAGATACTGCAGAAGAGGGTGTAAAATTGATAAAAGAAACTGCAGAAAATGTTGATTTGGCGGCTAGAGAACTTCCCGACGCCAATTTGACACCAGAAGATTTATGGGCAAATCATTCCAAGGTGGTCCAACCAAAGCCTCACAGAAAGGATAGTCCTTCTTGGAAGGCTATCCAGAAGATTTTGGACAGCGGAGAACCAATAGGACTGAAACATTTCAGGCCAGTTAAACCTTTGGGATCAGGTGATACTGGCAGCGTGCATTTGGTTGAACTGTGCGGGACAGATCAGTATTTTGCAATGAAGGCAATGGATAAGGGTGTTATGCTTAACCGCAACAAGGTGCATAGAGCTTGCGCGGAGAGAGAAATACTTGACATGTTGGATCATCCTTTTCTTCCTGCATTATATGCTTCATTTCAGACAAAAACACATGTTTGTCTTATAACTGATTACTGCCCTGGTGGGGAACTCTTTCTGCTTTTGGACAGACAACCTACAAAGGTCATAAAAGAAGATGCTGTAAGGTTTTATGCTGCTGAAGTTGTCGTGGCATTAGAGTATCTTCATTGTCAAGGGATAATTTACCGGGATTTGAAGCCCGAAAATGTTCTACTACAGAGCAATGGACATGTTGCCTTGACAGATTTTGACTTGTCATGTTTGACTTCTTGCAAACCTCAGCTTTTGCTTCCAACCACAAATGAGAAGAAAAAGCAATCAAAATCTCAACAGGCTCCAATCTTTATGGCTGAACCCATGCGAGCATCCAACTCATTCGTTGGTACTGAAGAGTACATAGCACCGGAAATCATAACTGGGGCAGGCCATACTAGTGCTGTGGACTGGTGGGCTTTGGGCATCCTTATCTATGAGATGCTCTATGGATACACTCCCTTTAGGGGGAAGACAAGGCAAAAAACTTTCGCCAACATTCTTCATAAGGATCTTAAATTCCCAAAGAGTATATCGGCTAGTCTTAGTACGAAGCAGTTAATTTTCAGGTTGTTGCATAGAGACCCCAAAAACCGATTGGGTTCTCAAGAAGGAGCAAACGAAATCAAACAACATCCTTTCTTCCGAGGAGTCAATTGGGCGCTCGTTCGTTGCATGAGTCCGCCCGAGCTTGCAGCTCCTCTTTTCGAGACAACAGATGCTGAAAAAGATGCTATTAAAAGTAAAACTTCAGATTTTGATCTAAAAGATCTTGAACTCAGTGTTTTCTGA | 3054 | 47.71 | MEPLDKAQPKSSPLAPFPRDSRGSLEVFNPSSTYSSRSINSIPRPNPAWPNWVEPARTSSESDSSRLAAKPAAGKTADEITSWMAFKDANPSQPSSPLAQKTISAILSEKSPAVRAQSPDEVGSAAQRAAEWGLVLKTDTETGKPQGVGVRTSGGDEPNAKQENSRRTSNNSVRSSGDMSDDGARERGIPRVSEDLKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVIGRNCRFLQGADTDPEDVAKIREALQAGTSYCGRLLNYKKDGTPYWNLLTISPIKDDDGKVLKFIGMQVEVSKHTEGFKDKMVRPNGLPESLIRYDARQKEMATSSVTELVQAVKRPRSLSESRPRALSESMSRRLVRKSGGDDLRVEAAAMVRRKSESAAAPTGRNSHGRSRRSMQRISELPEKKPKKFGRRSFMGIKRKSRSNVESFDIDIEDGSDDDDETDDDERPDSVDDKVRQREMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRQFLQGPETDRATVRKIRDAIDNQTEVTVQLINYTKTGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLSNCIPQDTAEEGVKLIKETAENVDLAARELPDANLTPEDLWANHSKVVQPKPHRKDSPSWKAIQKILDSGEPIGLKHFRPVKPLGSGDTGSVHLVELCGTDQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFLPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVIKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQSNGHVALTDFDLSCLTSCKPQLLLPTTNEKKKQSKSQQAPIFMAEPMRASNSFVGTEEYIAPEIITGAGHTSAVDWWALGILIYEMLYGYTPFRGKTRQKTFANILHKDLKFPKSISASLSTKQLIFRLLHRDPKNRLGSQEGANEIKQHPFFRGVNWALVRCMSPPELAAPLFETTDAEKDAIKSKTSDFDLKDLELSVF | 1017 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 6476122 | 6486631 | - | MC02g0818 | Mch2g0963 | 681885 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch2g0963 | 1017 | FunFam | Putative LOV domain-containing protein | 766 | 981 | - | - | |
Mch2g0963 | 1017 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 213 | 305 | IPR035965 | - | |
Mch2g0963 | 1017 | ProSiteProfiles | PAC domain profile. | 555 | 609 | IPR000700 | - | |
Mch2g0963 | 1017 | MobiDBLite | consensus disorder prediction | 356 | 390 | - | - | |
Mch2g0963 | 1017 | PANTHER | FLIPPASE KINASE 1-RELATED | 636 | 992 | - | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
Mch2g0963 | 1017 | MobiDBLite | consensus disorder prediction | 351 | 474 | - | - | |
Mch2g0963 | 1017 | Gene3D | PAS domain | 468 | 634 | - | - | |
Mch2g0963 | 1017 | MobiDBLite | consensus disorder prediction | 164 | 178 | - | - | |
Mch2g0963 | 1017 | Pfam | Protein kinase domain | 685 | 969 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch2g0963 | 1017 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 496 | 596 | IPR035965 | - | |
Mch2g0963 | 1017 | FunFam | LOV domain-containing protein | 681 | 765 | - | - | |
Mch2g0963 | 1017 | FunFam | LOV domain-containing protein | 469 | 634 | - | - | |
Mch2g0963 | 1017 | ProSiteProfiles | PAS repeat profile. | 484 | 554 | IPR000014 | - | |
Mch2g0963 | 1017 | SMART | pac_2 | 558 | 600 | IPR001610 | - | |
Mch2g0963 | 1017 | SMART | pac_2 | 269 | 311 | IPR001610 | - | |
Mch2g0963 | 1017 | CDD | STKc_phototropin_like | 680 | 988 | - | - | |
Mch2g0963 | 1017 | ProSiteProfiles | Protein kinase domain profile. | 682 | 969 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch2g0963 | 1017 | Gene3D | Transferase(Phosphotransferase) domain 1 | 766 | 979 | - | - | |
Mch2g0963 | 1017 | MobiDBLite | consensus disorder prediction | 448 | 466 | - | - | |
Mch2g0963 | 1017 | Gene3D | Phosphorylase Kinase; domain 1 | 681 | 765 | - | - | |
Mch2g0963 | 1017 | ProSiteProfiles | PAC domain profile. | 266 | 320 | IPR000700 | - | |
Mch2g0963 | 1017 | SUPERFAMILY | Protein kinase-like (PK-like) | 660 | 990 | IPR011009 | - | |
Mch2g0963 | 1017 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 803 | 815 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch2g0963 | 1017 | ProSiteProfiles | PAS repeat profile. | 192 | 263 | IPR000014 | - | |
Mch2g0963 | 1017 | Pfam | PAS domain | 213 | 309 | IPR000014 | - | |
Mch2g0963 | 1017 | Pfam | PAS domain | 503 | 596 | IPR000014 | - | |
Mch2g0963 | 1017 | FunFam | Putative LOV domain-containing protein | 206 | 362 | - | - | |
Mch2g0963 | 1017 | SMART | pas_2 | 482 | 552 | IPR000014 | - | |
Mch2g0963 | 1017 | SMART | pas_2 | 194 | 263 | IPR000014 | - | |
Mch2g0963 | 1017 | Gene3D | PAS domain | 206 | 369 | - | - | |
Mch2g0963 | 1017 | MobiDBLite | consensus disorder prediction | 411 | 428 | - | - | |
Mch2g0963 | 1017 | CDD | PAS | 219 | 308 | IPR000014 | - | |
Mch2g0963 | 1017 | CDD | PAS | 495 | 596 | IPR000014 | - | |
Mch2g0963 | 1017 | NCBIfam | PAS domain S-box protein | 505 | 596 | IPR000014 | - | |
Mch2g0963 | 1017 | NCBIfam | PAS domain S-box protein | 219 | 311 | IPR000014 | - | |
Mch2g0963 | 1017 | MobiDBLite | consensus disorder prediction | 25 | 45 | - | - | |
Mch2g0963 | 1017 | SMART | serkin_6 | 682 | 969 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch2g0963 | 1017 | ProSitePatterns | Protein kinases ATP-binding region signature. | 688 | 711 | IPR017441 | GO:0005524(InterPro) | |
Mch2g0963 | 1017 | MobiDBLite | consensus disorder prediction | 1 | 77 | - | - | |
Mch2g0963 | 1017 | MobiDBLite | consensus disorder prediction | 135 | 186 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch2g0963 | Mch-Chr2:6476122 | Mch4g0368 | Mch-Chr4:2323977 | 9.39E-288 | dispersed | |
Mch2g0963 | Mch-Chr2:6476122 | Mch2g0443 | Mch-Chr2:3222422 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
77218 | PF00069 | Pkinase | 6.30E-63 | CL0016 | Mch | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch2g0963 | K20715 | - | csv:101214662 | 1772.67 |