Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0965 AATGAAGGGATAGAAACATTTACATTCAACGAACTTGTAGTAGCAACTAAAAATTTCAAATCAGATTGCTTTCTGGGCGAGGGCGGATTTGGTAAAGTTTACAGAGGCCATTTGGGAAGAATCAACAACCAGGCTGTGGCTATCAAGCAACTTGATCGCAATGGGCTTCAAGGTGTGAGGGAATTTATGGTGGAAGTGCTGACATTAAGTTTGGCCAATCACTCAAACCTTGTGAAATTGATAGGGTATTGTGCAGAGGGGGATCAGAGGCTGTTGGTTTATGAGTTCATGCCATTAGGATCATTGGACAAACATTTGCATGATGCTCCACCGGGCAGAAAAGTGCTTGATTGGAATACAAGAATGAAAATAGCAGCGGGTGCAGCGAGGGGATTGGAGTACTTGCATGACAAGATGACACCTGCGGTTATATATCGGGATCTAAAATGCTCGAACATTTTGCTTGGGGACGGGTACTGGCCGAAGCTCTCGGATTTCGGTCTAGCCAAAGTGGGTCCTAGTGGAGATAAGACCCATGTTTCTACTAGAGTCATGGGAACATATGGATATTGTGCACCAGATTATGCAATGACAGGCCAATTGACATTCAAATCTGATATCTACAGCTTTGGAGTTGTTCTTTTGGAGCTCATCACTGGAAGGAAAGCCATTGACCACACAAGACCACCAAGGGAGATGAGTTTGGTAGCATGGGCGAGACCGTTGTTTCAAGATCGAAAACGGTTCTTGCTAATGGCGGACCCGAGGCTCGAAAGTCAGTACCCTGTCAGAGGGCTATATCAAGCTCTTGCCATTGCTGCAATGTGCCTCCAGGAGCAGCCTACAATGAGGCCAATGATATCAGAAGTGGTCACTGCTCTAGATTTCCTTTCTTCCCAGAATTAT 906 45.36 NEGIETFTFNELVVATKNFKSDCFLGEGGFGKVYRGHLGRINNQAVAIKQLDRNGLQGVREFMVEVLTLSLANHSNLVKLIGYCAEGDQRLLVYEFMPLGSLDKHLHDAPPGRKVLDWNTRMKIAAGAARGLEYLHDKMTPAVIYRDLKCSNILLGDGYWPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDHTRPPREMSLVAWARPLFQDRKRFLLMADPRLESQYPVRGLYQALAIAAMCLQEQPTMRPMISEVVTALDFLSSQNY 302
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6496007 6498010 - MC02g0820 Mch2g0965 681887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0965 302 Gene3D Phosphorylase Kinase; domain 1 1 96 - -
Mch2g0965 302 ProSiteProfiles Protein kinase domain profile. 19 297 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g0965 302 SUPERFAMILY Protein kinase-like (PK-like) 5 296 IPR011009 -
Mch2g0965 302 CDD STKc_IRAK 25 295 - -
Mch2g0965 302 Gene3D Transferase(Phosphotransferase) domain 1 97 302 - -
Mch2g0965 302 PANTHER OS07G0668900 PROTEIN 5 301 - -
Mch2g0965 302 SMART serkin_6 19 297 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g0965 302 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch2g0965 302 ProSitePatterns Protein kinases ATP-binding region signature. 25 49 IPR017441 GO:0005524(InterPro)
Mch2g0965 302 PIRSF ILK 8 301 - -
Mch2g0965 302 FunFam Serine/threonine-protein kinase PBS1 97 302 - -
Mch2g0965 302 FunFam probable serine/threonine-protein kinase RLCKVII 1 96 - -
Mch2g0965 302 Pfam Protein tyrosine and serine/threonine kinase 24 293 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0965 Mch-Chr2:6496007 Mch3g0441 Mch-Chr3:7952832 1.40E-179 dispersed
Mch9g2164 Mch-Chr9:22324118 Mch2g0965 Mch-Chr2:6496007 1.87E-95 dispersed
Mch2g0965 Mch-Chr2:6496007 Mch5g1795 Mch-Chr5:18360202 9.76E-164 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77219 PF07714 PK_Tyr_Ser-Thr 3.40E-43 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0965 - - - 0.0