Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch2g0965 | AATGAAGGGATAGAAACATTTACATTCAACGAACTTGTAGTAGCAACTAAAAATTTCAAATCAGATTGCTTTCTGGGCGAGGGCGGATTTGGTAAAGTTTACAGAGGCCATTTGGGAAGAATCAACAACCAGGCTGTGGCTATCAAGCAACTTGATCGCAATGGGCTTCAAGGTGTGAGGGAATTTATGGTGGAAGTGCTGACATTAAGTTTGGCCAATCACTCAAACCTTGTGAAATTGATAGGGTATTGTGCAGAGGGGGATCAGAGGCTGTTGGTTTATGAGTTCATGCCATTAGGATCATTGGACAAACATTTGCATGATGCTCCACCGGGCAGAAAAGTGCTTGATTGGAATACAAGAATGAAAATAGCAGCGGGTGCAGCGAGGGGATTGGAGTACTTGCATGACAAGATGACACCTGCGGTTATATATCGGGATCTAAAATGCTCGAACATTTTGCTTGGGGACGGGTACTGGCCGAAGCTCTCGGATTTCGGTCTAGCCAAAGTGGGTCCTAGTGGAGATAAGACCCATGTTTCTACTAGAGTCATGGGAACATATGGATATTGTGCACCAGATTATGCAATGACAGGCCAATTGACATTCAAATCTGATATCTACAGCTTTGGAGTTGTTCTTTTGGAGCTCATCACTGGAAGGAAAGCCATTGACCACACAAGACCACCAAGGGAGATGAGTTTGGTAGCATGGGCGAGACCGTTGTTTCAAGATCGAAAACGGTTCTTGCTAATGGCGGACCCGAGGCTCGAAAGTCAGTACCCTGTCAGAGGGCTATATCAAGCTCTTGCCATTGCTGCAATGTGCCTCCAGGAGCAGCCTACAATGAGGCCAATGATATCAGAAGTGGTCACTGCTCTAGATTTCCTTTCTTCCCAGAATTAT | 906 | 45.36 | NEGIETFTFNELVVATKNFKSDCFLGEGGFGKVYRGHLGRINNQAVAIKQLDRNGLQGVREFMVEVLTLSLANHSNLVKLIGYCAEGDQRLLVYEFMPLGSLDKHLHDAPPGRKVLDWNTRMKIAAGAARGLEYLHDKMTPAVIYRDLKCSNILLGDGYWPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDHTRPPREMSLVAWARPLFQDRKRFLLMADPRLESQYPVRGLYQALAIAAMCLQEQPTMRPMISEVVTALDFLSSQNY | 302 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 6496007 | 6498010 | - | MC02g0820 | Mch2g0965 | 681887 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch2g0965 | 302 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 96 | - | - | |
Mch2g0965 | 302 | ProSiteProfiles | Protein kinase domain profile. | 19 | 297 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch2g0965 | 302 | SUPERFAMILY | Protein kinase-like (PK-like) | 5 | 296 | IPR011009 | - | |
Mch2g0965 | 302 | CDD | STKc_IRAK | 25 | 295 | - | - | |
Mch2g0965 | 302 | Gene3D | Transferase(Phosphotransferase) domain 1 | 97 | 302 | - | - | |
Mch2g0965 | 302 | PANTHER | OS07G0668900 PROTEIN | 5 | 301 | - | - | |
Mch2g0965 | 302 | SMART | serkin_6 | 19 | 297 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch2g0965 | 302 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 143 | 155 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch2g0965 | 302 | ProSitePatterns | Protein kinases ATP-binding region signature. | 25 | 49 | IPR017441 | GO:0005524(InterPro) | |
Mch2g0965 | 302 | PIRSF | ILK | 8 | 301 | - | - | |
Mch2g0965 | 302 | FunFam | Serine/threonine-protein kinase PBS1 | 97 | 302 | - | - | |
Mch2g0965 | 302 | FunFam | probable serine/threonine-protein kinase RLCKVII | 1 | 96 | - | - | |
Mch2g0965 | 302 | Pfam | Protein tyrosine and serine/threonine kinase | 24 | 293 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch2g0965 | Mch-Chr2:6496007 | Mch3g0441 | Mch-Chr3:7952832 | 1.40E-179 | dispersed | |
Mch9g2164 | Mch-Chr9:22324118 | Mch2g0965 | Mch-Chr2:6496007 | 1.87E-95 | dispersed | |
Mch2g0965 | Mch-Chr2:6496007 | Mch5g1795 | Mch-Chr5:18360202 | 9.76E-164 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
77219 | PF07714 | PK_Tyr_Ser-Thr | 3.40E-43 | CL0016 | Mch | PK |
Pathway information
