Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0972 ATGGACGAGTTCTTAGACAATATACCGCCCATGGATCTGATGCGTTCCGAGAAGATGACGTTTGTCCAGCTTATAATCCCGGTCGAGTCCGCTCATCGAGCCGTATCGTACCTTGGCGAACTTGGCATCCTTCAATTTAGAGATTTAAACGTGGACAAAAGTCCTTTCCAGAGAACCTTTGTTAACCAGGTAAAGCGATGTGCAGAGATGTCTAGGAAGTTGAGATTTTTCAAAGATCAAATTAGTAAAGCTGGTGTACTGACATCTACGCGACCAATTCTTCAAGAACATATCGAGCTAGAGGATTTAGAGATACGACTAGCTGAACATGAGCATGAGCTGATTGAAATGAACTCTAACAGTGAGAAGCTTCGACAGTCATATAATGAGCTCTTGGAATTCAAGATGGTATTGCAAAAGGCAAGCGTCTTTCTGGTGTCCAGTAATAGCCATTTAGTTCCAGAGGAAAGGGAGTTGAATGAAAATGTTTTCTTGAATGATAACTTCATTGAGAATTCATCATTACTTGAACAGGATATGAGACCAGGACCATCCAGCCAATCTGGTTTGAGATTTATTTGTGGAATTATTTGTAAATCCAAAGTTCTTAGATTTGAGAGGATGCTGTTTCGTGCAACCAGGGGAAATATGCTTTTCAATCAGGCACCGGGAGATGTACAGATCATGGATCCCATATCTACAGAAACGGTTGAGAAAACAGTATTTGTAGTGTTTTTCTCTGGGGAGCAGGCCAGAAATAAAGTTTTGAAGATCTGTGAAGCTTTCGGAGCAAATTGCTATCCTGTTCCTGAAGATATAACCAAACAGAGGCAGATAACTAGAGAAGTTTCATCTCGCCTCACTGAACTTGAAGCCACTTTAGATGCAGGAATGCATCACCGAAACGAGGCTCTTGCAACAATAGGGTTTCACCTGATAAAATGGATGAATATGGTAAGAAGGGAAAAGGCTGTATATGATACATTAAACATGTTGAACTTTGATGTCACGAAAAAATGTCTTGTTGGAGAAGGCTGGTGTCCAATCTTTGCAAAAGCCCAGATTCAGGAGGCATTGCAACGAGCAACATTTGATAGCAGTTCACAAGTGGGCATAATATTTCACGTGATGGATACAGTTGAATCCCCTCCTACATATTTTAGAACAAACCGTTTGACAAATGCTTTTCAGGAAATTGTTGATGCCTATGGTGTTGCTAGATATCAAGAAGCAAATCCTGCAGTTTACACTGTTATTACATTTCCATTCCTATTCGCAGTGATGTTTGGGGATTGGGGTCATGGAATATGCTTGTTGCTTGGAGCTTTATTTCTCATAGCTCGTGAAAGTAAGCTCAATAATCAGAAATTAGGAAGCTTTATGGAGATGCTATTTGGTGGGCGCTATGTACTTCTTTTGATGTCACTATTTTCAATTTATTGTGGGTTGATCTACAATGAATTCTTCTCTGTTCCGTATCATATATTCGGTGGGTCTGCTTACAAGTGTCGAGATAATTCATGCAGTGATGCTCACACTGTTGGGTTAGTTAAATACCGTGATCCTTATCCATTTGGAGTTGACCCGAGTTGGCGTGGAAGTCGTTCAGAACTTCCTTTTCTGAACTCTCTTAAAATGAAGATGTCTATCTTGTTGGGTATTGCCCAAATGAACTTAGGAATCATATTGAGTTATTTTAATGCACGTTTTACTGGAAGCTCAATTGATATCAGGCACCAGTTTGTACCACAAGTGATCTTTCTTAACAGCCTTTTTGGATATCTTTCTCTTCTCATTATCATAAAGTGGTGCACTGGATCTCAAGCAGACCTCTATCATGTGATGATTTACATGTTTTTAAGCCCATTTGAAGATCTCGGTGAGAATGAATTGTTTTGGGGCCAAAGACCTCTTCAAATTCTCTTGTTGATGTTGGCTATAATTGCAGTGCCTTGGATGCTCTTTCCTAAACCTTTTATTTTGAAAAAGATTCACACAGAGAGATTTCAAGGTCGTACTTATGGGATACTTGGAACCTCCGAGATAGATCTTGAGGCAGAACCTGATTCGGCTAGGCCACACCAAGATGACTTCAATTTTAGTGAGATATTTGTTCACCAAATGATTCACTCCATAGAATTCGTCTTGGGTGCAGTTTCAAATACAGCATCGTATCTCCGACTTTGGGCTTTAAGCTTGGCGCACTCAGAATTGTCAACTGTTTTCTATGAGAAAGTACTCCTCCTAGCTTGGGGGTATGACAGCTTTGTCATCCGGCTGATTGGTTTAGCTGTTTTTTCCTTTGCCACTGCTTTCATACTACTTATGATGGAGACCCTTAGTGCCTTCCTTCATGCCCTGCGTCTTCATTGGGTTGAGTTTCAAAATAAGTTCTACCATGGTGATGGCCACAAGTTCAGACCTTTTTCCTTTGCCTCCATTGATGAGGATGAAGATTAA 2460 40.41 MDEFLDNIPPMDLMRSEKMTFVQLIIPVESAHRAVSYLGELGILQFRDLNVDKSPFQRTFVNQVKRCAEMSRKLRFFKDQISKAGVLTSTRPILQEHIELEDLEIRLAEHEHELIEMNSNSEKLRQSYNELLEFKMVLQKASVFLVSSNSHLVPEERELNENVFLNDNFIENSSLLEQDMRPGPSSQSGLRFICGIICKSKVLRFERMLFRATRGNMLFNQAPGDVQIMDPISTETVEKTVFVVFFSGEQARNKVLKICEAFGANCYPVPEDITKQRQITREVSSRLTELEATLDAGMHHRNEALATIGFHLIKWMNMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPIFAKAQIQEALQRATFDSSSQVGIIFHVMDTVESPPTYFRTNRLTNAFQEIVDAYGVARYQEANPAVYTVITFPFLFAVMFGDWGHGICLLLGALFLIARESKLNNQKLGSFMEMLFGGRYVLLLMSLFSIYCGLIYNEFFSVPYHIFGGSAYKCRDNSCSDAHTVGLVKYRDPYPFGVDPSWRGSRSELPFLNSLKMKMSILLGIAQMNLGIILSYFNARFTGSSIDIRHQFVPQVIFLNSLFGYLSLLIIIKWCTGSQADLYHVMIYMFLSPFEDLGENELFWGQRPLQILLLMLAIIAVPWMLFPKPFILKKIHTERFQGRTYGILGTSEIDLEAEPDSARPHQDDFNFSEIFVHQMIHSIEFVLGAVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDSFVIRLIGLAVFSFATAFILLMMETLSAFLHALRLHWVEFQNKFYHGDGHKFRPFSFASIDEDED 819
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6572280 6581875 - MC02g0827 Mch2g0972 681894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0972 819 PIRSF ATP6V0A1 9 819 IPR026028 GO:0000220(InterPro)|GO:0046961(InterPro)
Mch2g0972 819 PANTHER VACUOLAR PROTON ATPASES 11 818 IPR002490 GO:0007035(PANTHER)|GO:0016471(PANTHER)|GO:0033179(InterPro)|GO:0046961(InterPro)|GO:0051117(PANTHER)|GO:1902600(InterPro)
Mch2g0972 819 Pfam V-type ATPase 116kDa subunit family 37 811 IPR002490 GO:0033179(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Mch2g0972 819 Coils Coil 93 127 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0972 Mch-Chr2:6572280 Mch4g0569 Mch-Chr4:3625781 0 dispersed
Mch2g0972 Mch-Chr2:6572280 Mch8g0816 Mch-Chr8:5767645 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0972 K02154 - csv:101216514 1570.06