Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch2g0984 | ATGGGTTCTAAGGATGTGGTGATGGAAGAGGAGAGGAGGCAGCAGGGGAAGGACTATGTGGACCCGCCACCAGCTCCGCTGCTGGGCTTCTCCGAGCTCAAGCTTTGGTCCTTTCACAGAGCTGTCATTGCTGAGTTCATGGCTACTCTCCTTTTCCTCTACATCACCCTCGCCACCGTCATCGGAAACAATGCCCGTCCCGGGCCCTGCACCGGCGTCGGCCCTCTCGGTATAGCCTGGGCCTTCGGCGTCATGATCTTCGTTCTTGTTTACTGCACCGCTGGTATTTCAGGTGGGCATATAAATCCAGCCGTGACGTTTGGGCTGTTGTTGGCGAGAAAGGTGTCTGTGGTCCGAGCGGTAGCTTATATGGCGGCGCAGTGTCTCGGAGCCATTGTCGGCGTTGCCTTGGTAAAATCTTTCATGAAGCATGCTTACAACAGCCATGGTGGCGGAGCTAACCTCGTCGCCGACGGTTTCAGCCGAGGCACCGCCCTCGGAGCCGAGATTATCGGCACTTTTCTGCTGGTCTACACCGTGTTCTCCGCCACTGATCCCAAGAGAAACGCTCGTGACTCGCATGTTCCTGTTTTGGCTCCATTACCCATCGGATTCGCCGTGTTCGTAGTTCACCTAGCCACCATTCCGATAACAGGCACCGGCATAAACCCAGCTCGGAGCTTAGGTGCTGCAGTCATGTACAACAACGGAAGAGCTTGGAGAGACCATTGGATATTCTGGGTTGGGCCCTTTCTCGGGGCGGCAGCAGCAGCGTTGTATCATCAATACGTTCTCAGAGCGGCAGGAGTGAAAGCACTCGGATCCTTCCGCAGCAACCGCTCTGTCTGA | 849 | 56.07 | MGSKDVVMEEERRQQGKDYVDPPPAPLLGFSELKLWSFHRAVIAEFMATLLFLYITLATVIGNNARPGPCTGVGPLGIAWAFGVMIFVLVYCTAGISGGHINPAVTFGLLLARKVSVVRAVAYMAAQCLGAIVGVALVKSFMKHAYNSHGGGANLVADGFSRGTALGAEIIGTFLLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFVVHLATIPITGTGINPARSLGAAVMYNNGRAWRDHWIFWVGPFLGAAAAALYHQYVLRAAGVKALGSFRSNRSV | 282 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 6647741 | 6651039 | - | MC02g0839 | Mch2g0984 | 681906 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch2g0984 | 282 | ProSitePatterns | MIP family signature. | 100 | 108 | IPR022357 | - | |
Mch2g0984 | 282 | PRINTS | Major intrinsic protein family signature | 40 | 59 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Mch2g0984 | 282 | PRINTS | Major intrinsic protein family signature | 168 | 186 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Mch2g0984 | 282 | PRINTS | Major intrinsic protein family signature | 119 | 138 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Mch2g0984 | 282 | PRINTS | Major intrinsic protein family signature | 82 | 106 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Mch2g0984 | 282 | PRINTS | Major intrinsic protein family signature | 204 | 226 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Mch2g0984 | 282 | PRINTS | Major intrinsic protein family signature | 244 | 264 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Mch2g0984 | 282 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 5 | 278 | IPR034294 | GO:0005773(PANTHER)|GO:0005886(PANTHER)|GO:0009506(PANTHER)|GO:0015250(PANTHER) | |
Mch2g0984 | 282 | SUPERFAMILY | Aquaporin-like | 32 | 266 | IPR023271 | - | |
Mch2g0984 | 282 | Pfam | Major intrinsic protein | 32 | 261 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Mch2g0984 | 282 | Gene3D | Glycerol uptake facilitator protein. | 25 | 282 | IPR023271 | - | |
Mch2g0984 | 282 | FunFam | Probable aquaporin PIP1-2 | 25 | 280 | - | - | |
Mch2g0984 | 282 | NCBIfam | MIP family channel protein | 44 | 261 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Mch2g0984 | 282 | CDD | MIP | 40 | 264 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch2g0984 | Mch-Chr2:6647741 | Mch9g1784 | Mch-Chr9:19720111 | 1.02E-143 | dispersed | |
Mch1g0798 | Mch-Chr1:11604393 | Mch2g0984 | Mch-Chr2:6647741 | 4.97E-131 | wgd | |
Mch2g0984 | Mch-Chr2:6647741 | Mch4g0481 | Mch-Chr4:3094758 | 7.63E-158 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch2g0984 | K09872 | - | mdm:103444918 | 456.447 |