Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0989 ATGGAAGACGGTGAGCTTGACTCCTCAAACCCGGAGGTGTTTTCGAGTTCAAATGCCGTTGAGCTTCCGAGCAGTTGCTCGATGGATAGCTTCTTTGATGAAATTTTGAAGGACACTCATGCTTGCACACACGCTCATACTTGCAACCCTCCTGGTCCTGATTATTCACATACGCATACCTGTTTTCATGTCCATACTAAAATTGTCTCTTCCCCCGCTGAAGACAAGGTGTCCACTGATGACACAGCGGAGTCTGTGGATAAGAAGAATAAGAAACGCCCACTAGGTAACCGCGAAGCAGTTCGTAAGTATCGTGAGAAGAAAAAGGCGAGAGCTGCATCGTTGGAAGATGAAGTTGTGAGATTGAGGGCCTTGAATCAGCAATTGTTGAAGAGATTACAAGGTCAGGCTGCATTGGAGGCCGAGATTTCAAGGCTCAAGTGTTTGCTTGTGGACATCCGAGGAAGAATTGAAGGGGAGATTGGAACATTTCCATATCAGAAATCAGCCACTTCGAATATGCCTGGCCAAAATGTGCCTGGTAGTTACATGATGAACCCATGTAATGTGCAGTGCAATGATCAGGCGTACTGCCTTCACCCAGGGGCCGATGGTAAAAGTGGAGAGAGTGTTTTGTTGAACGGCCAAAGTTTTAATGCTTGTGACTTTGAGAATCTTGAGTGCCTTGCAAATCAAAACACAGGAGGAGCGAAGGAGCTTCCTGACTGTGGATTAGGCGACACCACTTCTAATGTCAATTACTCAGAACTAAATCAGAAGAAAGGAGGAGGGGTCTGTAAAGCAACAGAAAATGGGAAGAGCTGA 825 46.06 MEDGELDSSNPEVFSSSNAVELPSSCSMDSFFDEILKDTHACTHAHTCNPPGPDYSHTHTCFHVHTKIVSSPAEDKVSTDDTAESVDKKNKKRPLGNREAVRKYREKKKARAASLEDEVVRLRALNQQLLKRLQGQAALEAEISRLKCLLVDIRGRIEGEIGTFPYQKSATSNMPGQNVPGSYMMNPCNVQCNDQAYCLHPGADGKSGESVLLNGQSFNACDFENLECLANQNTGGAKELPDCGLGDTTSNVNYSELNQKKGGGVCKATENGKS 274
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6685852 6689178 - MC02g0844 Mch2g0989 681911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0989 274 MobiDBLite consensus disorder prediction 77 98 - -
Mch2g0989 274 SMART brlzneu 84 152 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch2g0989 274 Coils Coil 98 132 - -
Mch2g0989 274 PANTHER CCAAT/ENHANCER BINDING PROTEIN 1 184 IPR031106 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0006357(PANTHER)
Mch2g0989 274 FunFam Basic leucine zipper 24 75 153 - -
Mch2g0989 274 CDD bZIP 91 144 - -
Mch2g0989 274 Pfam Basic region leucine zipper 87 134 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch2g0989 274 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 87 134 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch2g0989 274 MobiDBLite consensus disorder prediction 72 98 - -
Mch2g0989 274 SUPERFAMILY Leucine zipper domain 90 134 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch2g0989 274 Gene3D - 76 153 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0989 Mch-Chr2:6685852 Mch4g0488 Mch-Chr4:3155891 1.24E-107 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
42929 PF07716 bZIP_2 4.90E-15 CL0018 Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0989 K25785 - csv:101219501 500.745