Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0997 TCCGCCGATTCGACATTGAAGACCTTCATCTTCCGCGTCGACCATTTCTTGAAGCCCTCCGTTTTTCCCACCCATTTCCACTGGTACACTTCCGAGTTCGCTGAATCCCCCAAAATTTTACATGTTTACGACACCGTTTTCCATGGATTCTCTGCAACTCTCACTCAACAGCAAGTTGATTCCATCGGGAAACACCCGTCTGTGCTCGCCGTGTTCGAGGATCGTCGCCGTCAGCTTCACACCACCCGCTCCCCTCAATTTCTCGGCCTGCGGAACCAGCGTGGTCTCTGGTCCGATTCAGATTACGGGTCGGATGTAATCATCGGGGTTTTCGACACTGGGATTTCCCCGGAGCGACGGAGCTTCTCCGATGTGAATTTGGGGCCGGTTCCTCGTCGGTGGAAGGGGGCTTGTGAGACTGGAACTAAATTCACGGCGAGGAACTGTAACAGGAAGATCGTGGGTGCGAGGTTTTTCTCCAAGGGTCACGAGGCAGGGGCGAACGCGGCCGGTCCGATTATTGGGATCAACGACACGATTGAGTATCGGTCTCCGAGAGACGCCGACGGCCATGGGACTCACACGGCCTCCACCGCCGCTGGGCGCTACGCGTTTCAAGCCAGTTTTGAGGGTTACGCTTCTGGGATTGCCAAGGGCGTGGCTCCTAAAGCGCGTTTGGCGATTTACAAAGTCTGTTGGAAAAATTCGGGTTGTTTCGATTCTGATATTCTCGCGGCGTTTGATGCTGCGGTTAACGACGGCGTCGATGTCATCTCGATCTCAATCGGTGGTGGCGATGGCGTTTCCTCGCCGTATTATCTCGATCCAATTGCAATCGGAGCGTACGGCGCCGCTTCGAGCGGCGTTTTCGTTTCGTCCTCTGCTGGGAACGATGGGCCTAACGGAATGTCAGTGACGAACTTGGCGCCGTGGATTACGACGGTCGGAGCCGGCACGATAGACCGCAATTTCCCGGCGGTGGTGACTCTGGGAAACGGACGGAAAGTATCTGGTGTGTCGCTGTACGCCGGAGCGCCGTTGAACGGCAAAATGTATCCGTTGGTTTACCCTGGAAAATCTGGGGTGCTCTCTGTTTCTTTGTGTATGGAGAATTCGCTCGATTCTAAACTCGTGACAGGAAACATTGTGATCTGCGACCGGGGGAGTAATCCTCGAGTGGCCAAGGGTTTGGTGGTGAAGAAAGCCGGAGGCGTCGGAATGATTCTCGCGAACGGAATTTCAAACGGCGAAGGGCTCGTCGGCGATGCCCATCTTCTCCCCGCTTGCGCCGTCGGCTCCGACGAAGGCGACGCCATGAAAGCCTACGCATCGTCCTCTGCAAACCCCACCGCAACCATCGCTTTCCAGGGCACTATAATCGGAATCAAGCCGGCGCCGGTGGTGGCTTCGTTTTCTGCAAGAGGCCCAAATGGGTTAAACCCTGAAATTCTGAAACCGGACTTGATCGCACCGGGGGTCAACATTCTGGCCGCTTGGACCGACGCCGTCGGTCCAACAGGTTTGGATTTCGATACACGAAAAACAGAGTTCAATATCTTGTCTGGTACATCAATGGCGTGTCCCCACGTAAGTGGAGCCGCGGCTCTGCTGAAATCGGCTCACCCAGATTGGAGTCCAGCGGCATTAAGATCCGCCATGATGACCACCGCAAGTATCACCGACAACCGAGGGCAGCCGATGACCGAGGAATCCACTGGAAAACCTTCTACACCGTACGATTTCGGCGCCGGGCACGTGAATCTGGGCCTCGCAATGGACCCTGGGCTCGTCTACGACATCACGAACACCGATTACGTGAACTTCTTATGCTCACTCGGCTACGGGCCGAAGATGATTCAGGTGATAACCAGAACGCCGGTGTCATGTCCGGCGAAGAAGCCATTGCCGGAGAATCTCAATTACCCATCAATCGCGGCGATATTTTCCACTCTGTCAAAAGGGTGGTCGACCAAGGCGTTTATTCGGACGGTAACAAACGTGGGTCCAGCGAATTCGGTGTACAGAGCCAAAATCGAGGCCCCAAAAGGGGTGACGGTGAAAGTAAAGCCGTCGAAGCTGGTGTTTTCCGCGGCGGTGAAGAAGCAGAGCTACGCCGTGACAGTGTCAGCCGACAGCCAGAATCTGGCACTGGGCGACGCCGGTGCTGTATTTGGCTGGCTTTCTTGGTCCGATGGAAAGCATGTGGTCCGCAGCCCACTCGTAGTGACCCAAATAGAACCGTTG 2244 55.44 SADSTLKTFIFRVDHFLKPSVFPTHFHWYTSEFAESPKILHVYDTVFHGFSATLTQQQVDSIGKHPSVLAVFEDRRRQLHTTRSPQFLGLRNQRGLWSDSDYGSDVIIGVFDTGISPERRSFSDVNLGPVPRRWKGACETGTKFTARNCNRKIVGARFFSKGHEAGANAAGPIIGINDTIEYRSPRDADGHGTHTASTAAGRYAFQASFEGYASGIAKGVAPKARLAIYKVCWKNSGCFDSDILAAFDAAVNDGVDVISISIGGGDGVSSPYYLDPIAIGAYGAASSGVFVSSSAGNDGPNGMSVTNLAPWITTVGAGTIDRNFPAVVTLGNGRKVSGVSLYAGAPLNGKMYPLVYPGKSGVLSVSLCMENSLDSKLVTGNIVICDRGSNPRVAKGLVVKKAGGVGMILANGISNGEGLVGDAHLLPACAVGSDEGDAMKAYASSSANPTATIAFQGTIIGIKPAPVVASFSARGPNGLNPEILKPDLIAPGVNILAAWTDAVGPTGLDFDTRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAALRSAMMTTASITDNRGQPMTEESTGKPSTPYDFGAGHVNLGLAMDPGLVYDITNTDYVNFLCSLGYGPKMIQVITRTPVSCPAKKPLPENLNYPSIAAIFSTLSKGWSTKAFIRTVTNVGPANSVYRAKIEAPKGVTVKVKPSKLVFSAAVKKQSYAVTVSADSQNLALGDAGAVFGWLSWSDGKHVVRSPLVVTQIEPL 748
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6758467 6760710 - MC02g0852 Mch2g0997 681919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0997 748 CDD Peptidases_S8_3 78 558 IPR034197 -
Mch2g0997 748 ProSiteProfiles Serine proteases, subtilase domain profile. 78 592 - -
Mch2g0997 748 Gene3D Peptidase S8/S53 domain 105 605 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Mch2g0997 748 Gene3D - 321 460 - -
Mch2g0997 748 Pfam Peptidase inhibitor I9 19 80 IPR010259 -
Mch2g0997 748 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 36 740 IPR045051 -
Mch2g0997 748 SUPERFAMILY Subtilisin-like 79 596 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Mch2g0997 748 ProSitePatterns Serine proteases, subtilase family, serine active site. 522 532 IPR023828 -
Mch2g0997 748 Pfam Fibronectin type-III domain 638 742 IPR041469 -
Mch2g0997 748 Pfam PA domain 352 438 IPR003137 -
Mch2g0997 748 FunFam Subtilisin-like protease SBT1.5 609 745 - -
Mch2g0997 748 FunFam Subtilisin-like protease SBT1.9 1 80 - -
Mch2g0997 748 Gene3D - 609 745 - -
Mch2g0997 748 CDD PA_subtilisin_like 327 453 - -
Mch2g0997 748 FunFam subtilisin-like protease SBT1.5 321 460 - -
Mch2g0997 748 Pfam Subtilase family 103 573 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Mch2g0997 748 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 2 80 IPR037045 -
Mch2g0997 748 SUPERFAMILY PA domain 375 445 IPR046450 -
Mch2g0997 748 PRINTS Subtilisin serine protease family (S8) signature 103 122 IPR015500 -
Mch2g0997 748 PRINTS Subtilisin serine protease family (S8) signature 521 537 IPR015500 -
Mch2g0997 748 PRINTS Subtilisin serine protease family (S8) signature 187 200 IPR015500 -
Mch2g0997 748 FunFam Subtilisin-like protease SBT1.5 105 335 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0997 Mch-Chr2:6758467 Mch8g0642 Mch-Chr8:4628931 1.16E-243 dispersed
Mch10g0026 Mch-Chr10:159095 Mch2g0997 Mch-Chr2:6758467 7.94E-153 transposed
Mch1g2127 Mch-Chr1:20498102 Mch2g0997 Mch-Chr2:6758467 2.15E-97 transposed
Mch2g0012 Mch-Chr2:148578 Mch2g0997 Mch-Chr2:6758467 6.81E-143 transposed
Mch3g0715 Mch-Chr3:11474195 Mch2g0997 Mch-Chr2:6758467 1.15E-66 transposed
Mch3g0802 Mch-Chr3:12104534 Mch2g0997 Mch-Chr2:6758467 2.43E-93 transposed
Mch9g0180 Mch-Chr9:1355691 Mch2g0997 Mch-Chr2:6758467 1.25E-295 transposed
Mch11g0100 Mch-Chr11:658316 Mch2g0997 Mch-Chr2:6758467 7.97E-164 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0997 - - - 0.0