Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch2g1121 | GGTGCGGATCCATATTACAACGGACGGAATCATAACTGGAATAACCCGAGCGAACACTTTGTAAACATGGCGCCACTAGGCGGCGGAGGGCAAGGAGGATGGCCGTCGCCGCCGCCGCCGCCGCCGCCACAGGGCGTGTTGAGCAGCGATTTGAGCTCGAATTTCTCGGGTCCACACGCGCCGCCGTTGCCGCCGCCGCACCCGTCGGTGGCGCTGGGGTTCAACAAGAGTACGTTCACGTACGAGGAGCTGATGGCGGCGACGGGGAGCTTTGCTCCGGCGAACTTGCTGGGGCAAGGGGGATTTGGGTACGTGCATAAAGGAGTACTGCCGAACGGCAAGGAAATCGCCGTGAAGAGCCTGAAAACGGGAAGCGGGCAAGGAGATCGGGAATTCGCGGCGGAAGTGGAGATCATTAGCCGCGTCCACCACCGCCATCTTGTCTCCCTCGTCGGATATTGCATCGCCGGCGACCGGAAGATGTTGGTTTACGAATTTGTCCCTAATAACAACCTCGAATTCCACCTTCACGGTCATCCTCGCATCATCCACAGAGACATCAAGACTGCAAATATTCTCATAGACATGAGTTTCGAAGCTAAGGTGGCTGACTTCGGATTGGCGAAGCTTAATCAGGATAATTACACTCATGTATCCACTCGCGTCATGGGCACATTTGGATACTTGGCTCCGGAGTACGCATCAAGCGGGAAGCTAACGGATAAATCCGACGTGTTCTCATATGGCGTAATGCTTTTGGAACTGATAACCGGAAGACGACCGGTGGACCCGACCGGCGACATGGAGGACAGCTTAGTGGACTGGTCGAGGCCTCTTTGCTTAAAAGCAATAAATGATGGAAAGTACGATGAATTGGTGGACCCACGGCTGGAGAAGAACTACGATGCCCAGGAAATGACTTGTATGGTCTCTTGCGCCGCTGCCTGCATTCGCCACTCTGCCAGACGCCGTCCCAAAATGAGCCAGGTCGTTCGGGCGCTGGAAGGCGACGTGTCGCTGGAGGACTTGAACGAGGGAGTGAAGCCAGGTCAGAGTTCGTACTTCGGGTCGGGCACGTCGTCGTCGGAGTACGACGCAATCTCGTACAGCGCGGACATGAAGAGGTTCCGGGAAGTCGCGTTAGACAGCCGCGAGTATACGAGCAGCGAGTACGGCCTAAACCCATCCTCCACCAGCAGCGAAGCGAGCCGGAAGGCCAGCCACCTCTCCTCCCCCAAATTACCGCCCTCCGACCCCTAA | 1260 | 56.83 | GADPYYNGRNHNWNNPSEHFVNMAPLGGGGQGGWPSPPPPPPPQGVLSSDLSSNFSGPHAPPLPPPHPSVALGFNKSTFTYEELMAATGSFAPANLLGQGGFGYVHKGVLPNGKEIAVKSLKTGSGQGDREFAAEVEIISRVHHRHLVSLVGYCIAGDRKMLVYEFVPNNNLEFHLHGHPRIIHRDIKTANILIDMSFEAKVADFGLAKLNQDNYTHVSTRVMGTFGYLAPEYASSGKLTDKSDVFSYGVMLLELITGRRPVDPTGDMEDSLVDWSRPLCLKAINDGKYDELVDPRLEKNYDAQEMTCMVSCAAACIRHSARRRPKMSQVVRALEGDVSLEDLNEGVKPGQSSYFGSGTSSSEYDAISYSADMKRFREVALDSREYTSSEYGLNPSSTSSEASRKASHLSSPKLPPSDP | 419 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 7619496 | 7623671 | - | MC02g0953 | Mch2g1121 | 682043 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch2g1121 | 419 | Pfam | Protein kinase domain | 175 | 277 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch2g1121 | 419 | MobiDBLite | consensus disorder prediction | 1 | 69 | - | - | |
Mch2g1121 | 419 | ProSiteProfiles | Protein kinase domain profile. | 91 | 340 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch2g1121 | 419 | ProSitePatterns | Protein kinases ATP-binding region signature. | 97 | 119 | IPR017441 | GO:0005524(InterPro) | |
Mch2g1121 | 419 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 | 179 | 378 | IPR047117 | - | |
Mch2g1121 | 419 | MobiDBLite | consensus disorder prediction | 387 | 407 | - | - | |
Mch2g1121 | 419 | MobiDBLite | consensus disorder prediction | 385 | 419 | - | - | |
Mch2g1121 | 419 | SMART | serkin_6 | 91 | 334 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch2g1121 | 419 | Gene3D | Transferase(Phosphotransferase) domain 1 | 174 | 348 | - | - | |
Mch2g1121 | 419 | Gene3D | Phosphorylase Kinase; domain 1 | 68 | 166 | - | - | |
Mch2g1121 | 419 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 182 | 194 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch2g1121 | 419 | SUPERFAMILY | Protein kinase-like (PK-like) | 77 | 335 | IPR011009 | - | |
Mch2g1121 | 419 | FunFam | proline-rich receptor-like protein kinase PERK8 | 171 | 349 | - | - | |
Mch2g1121 | 419 | FunFam | proline-rich receptor-like protein kinase PERK1 | 69 | 166 | - | - | |
Mch2g1121 | 419 | MobiDBLite | consensus disorder prediction | 32 | 46 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch2g1121 | Mch-Chr2:7619496 | Mch6g0807 | Mch-Chr6:5618986 | 2.41E-159 | dispersed | |
Mch2g1121 | Mch-Chr2:7619496 | Mch8g3147 | Mch-Chr8:33763076 | 3.60E-163 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
77222 | PF00069 | Pkinase | 2.30E-24 | CL0016 | Mch | PK |
Pathway information
