Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g1121 GGTGCGGATCCATATTACAACGGACGGAATCATAACTGGAATAACCCGAGCGAACACTTTGTAAACATGGCGCCACTAGGCGGCGGAGGGCAAGGAGGATGGCCGTCGCCGCCGCCGCCGCCGCCGCCACAGGGCGTGTTGAGCAGCGATTTGAGCTCGAATTTCTCGGGTCCACACGCGCCGCCGTTGCCGCCGCCGCACCCGTCGGTGGCGCTGGGGTTCAACAAGAGTACGTTCACGTACGAGGAGCTGATGGCGGCGACGGGGAGCTTTGCTCCGGCGAACTTGCTGGGGCAAGGGGGATTTGGGTACGTGCATAAAGGAGTACTGCCGAACGGCAAGGAAATCGCCGTGAAGAGCCTGAAAACGGGAAGCGGGCAAGGAGATCGGGAATTCGCGGCGGAAGTGGAGATCATTAGCCGCGTCCACCACCGCCATCTTGTCTCCCTCGTCGGATATTGCATCGCCGGCGACCGGAAGATGTTGGTTTACGAATTTGTCCCTAATAACAACCTCGAATTCCACCTTCACGGTCATCCTCGCATCATCCACAGAGACATCAAGACTGCAAATATTCTCATAGACATGAGTTTCGAAGCTAAGGTGGCTGACTTCGGATTGGCGAAGCTTAATCAGGATAATTACACTCATGTATCCACTCGCGTCATGGGCACATTTGGATACTTGGCTCCGGAGTACGCATCAAGCGGGAAGCTAACGGATAAATCCGACGTGTTCTCATATGGCGTAATGCTTTTGGAACTGATAACCGGAAGACGACCGGTGGACCCGACCGGCGACATGGAGGACAGCTTAGTGGACTGGTCGAGGCCTCTTTGCTTAAAAGCAATAAATGATGGAAAGTACGATGAATTGGTGGACCCACGGCTGGAGAAGAACTACGATGCCCAGGAAATGACTTGTATGGTCTCTTGCGCCGCTGCCTGCATTCGCCACTCTGCCAGACGCCGTCCCAAAATGAGCCAGGTCGTTCGGGCGCTGGAAGGCGACGTGTCGCTGGAGGACTTGAACGAGGGAGTGAAGCCAGGTCAGAGTTCGTACTTCGGGTCGGGCACGTCGTCGTCGGAGTACGACGCAATCTCGTACAGCGCGGACATGAAGAGGTTCCGGGAAGTCGCGTTAGACAGCCGCGAGTATACGAGCAGCGAGTACGGCCTAAACCCATCCTCCACCAGCAGCGAAGCGAGCCGGAAGGCCAGCCACCTCTCCTCCCCCAAATTACCGCCCTCCGACCCCTAA 1260 56.83 GADPYYNGRNHNWNNPSEHFVNMAPLGGGGQGGWPSPPPPPPPQGVLSSDLSSNFSGPHAPPLPPPHPSVALGFNKSTFTYEELMAATGSFAPANLLGQGGFGYVHKGVLPNGKEIAVKSLKTGSGQGDREFAAEVEIISRVHHRHLVSLVGYCIAGDRKMLVYEFVPNNNLEFHLHGHPRIIHRDIKTANILIDMSFEAKVADFGLAKLNQDNYTHVSTRVMGTFGYLAPEYASSGKLTDKSDVFSYGVMLLELITGRRPVDPTGDMEDSLVDWSRPLCLKAINDGKYDELVDPRLEKNYDAQEMTCMVSCAAACIRHSARRRPKMSQVVRALEGDVSLEDLNEGVKPGQSSYFGSGTSSSEYDAISYSADMKRFREVALDSREYTSSEYGLNPSSTSSEASRKASHLSSPKLPPSDP 419
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7619496 7623671 - MC02g0953 Mch2g1121 682043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g1121 419 Pfam Protein kinase domain 175 277 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g1121 419 MobiDBLite consensus disorder prediction 1 69 - -
Mch2g1121 419 ProSiteProfiles Protein kinase domain profile. 91 340 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g1121 419 ProSitePatterns Protein kinases ATP-binding region signature. 97 119 IPR017441 GO:0005524(InterPro)
Mch2g1121 419 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 179 378 IPR047117 -
Mch2g1121 419 MobiDBLite consensus disorder prediction 387 407 - -
Mch2g1121 419 MobiDBLite consensus disorder prediction 385 419 - -
Mch2g1121 419 SMART serkin_6 91 334 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g1121 419 Gene3D Transferase(Phosphotransferase) domain 1 174 348 - -
Mch2g1121 419 Gene3D Phosphorylase Kinase; domain 1 68 166 - -
Mch2g1121 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 182 194 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch2g1121 419 SUPERFAMILY Protein kinase-like (PK-like) 77 335 IPR011009 -
Mch2g1121 419 FunFam proline-rich receptor-like protein kinase PERK8 171 349 - -
Mch2g1121 419 FunFam proline-rich receptor-like protein kinase PERK1 69 166 - -
Mch2g1121 419 MobiDBLite consensus disorder prediction 32 46 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g1121 Mch-Chr2:7619496 Mch6g0807 Mch-Chr6:5618986 2.41E-159 dispersed
Mch2g1121 Mch-Chr2:7619496 Mch8g3147 Mch-Chr8:33763076 3.60E-163 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77222 PF00069 Pkinase 2.30E-24 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g1121 - - - 0.0