Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g1164 ATGCCTCCCAAAACTCTCACTCCCATTAATATTCTCTCCTCTCTCTTCCTAATTCTTCCCTTCTTCTTCTTAACTCCAGCCCTCTCTGCCCCTTACTATCCAAATCTTTATCCCGACTTTTACGACGAGTCGTGCCCTCGCCTGCCGATGATAATTCGGTACCGCGTATGGGCAGCCGTCCAGAACGACTCAAGAATTGCTGCGTCGTTGCTTCGATTGCAATTCCATGATTGTATCGTAGATGGATGTGATGCGTCGGTGTTGCTTGACGATACCAAAGACATGAAAGGCGAGAAGAACGCGCCTGGCAACGTAAAATCGCTTCGAGGGTTTGAATTGATAGACGCTATAAAAGCAGACGTAGAAGCAAATTGTCCAGAAACTGTTTCTTGTGTTGATATATTGGGTCTTGCAGCTAGAGAAGCTGTGTATCTGGTCGGAGGACCATATTGGAACCTTCCACTGGGACGTAGAGATGGCATAACCGCAAGCATGAAGTCAGTCATCGAGCAGCTCCCGTCCCCGGGCGCATCTCTCGAGAACAACACTGCCAAGTTCACTTCAAAGGGCCTCGACATAAAGGACCTCGTCGTGCTTTCGGGAGCCCACACCATCGGGTTCGCCCGGTGCGTGACATTCAAGAAGCGGCTGTTCAACTACAAGGGGTCGGGGCGACCCGACCCGGACATAAACACCGTGATGCTGGCGGATCTGCAGAACATGTGCACCAGCAGAAACGACGCGACGAACGGGATTCTGGCGCCACTGGACGTGGCCACTGTCGACAGATTCGACAACGAGTACTACACCAATCTGATGAGCGGCGTGGGGCTGCTGGAATCGGACCAGGGCCTGATGGCGGACCCGGATACGGTGCGCCTGGTCCGAGCCTACAGCTTCGACCCGAACCTGTTCTTCGATGATTTTGCAGAGTCCATGACCAGGATGAGCCTGGTTGGGGTTCTGAGTGGGCGCAGTGGCCAGATTCGAAGGGTGTGTGGCGCTGTTAATGATGATGGCTACTGA 1026 53.22 MPPKTLTPINILSSLFLILPFFFLTPALSAPYYPNLYPDFYDESCPRLPMIIRYRVWAAVQNDSRIAASLLRLQFHDCIVDGCDASVLLDDTKDMKGEKNAPGNVKSLRGFELIDAIKADVEANCPETVSCVDILGLAAREAVYLVGGPYWNLPLGRRDGITASMKSVIEQLPSPGASLENNTAKFTSKGLDIKDLVVLSGAHTIGFARCVTFKKRLFNYKGSGRPDPDINTVMLADLQNMCTSRNDATNGILAPLDVATVDRFDNEYYTNLMSGVGLLESDQGLMADPDTVRLVRAYSFDPNLFFDDFAESMTRMSLVGVLSGRSGQIRRVCGAVNDDGY 341
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 7960301 7962318 + MC02g0991 Mch2g1164 682086
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch2g1164 341 CDD secretory_peroxidase 35 336 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Mch2g1164 341 PRINTS Plant peroxidase signature 194 206 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g1164 341 PRINTS Plant peroxidase signature 255 270 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g1164 341 PRINTS Plant peroxidase signature 69 89 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g1164 341 PRINTS Plant peroxidase signature 128 138 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g1164 341 PRINTS Plant peroxidase signature 271 288 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g1164 341 PRINTS Plant peroxidase signature 45 64 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g1164 341 PRINTS Plant peroxidase signature 109 122 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g1164 341 PRINTS Plant peroxidase signature 147 162 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g1164 341 PRINTS Plant peroxidase signature 311 324 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g1164 341 ProSitePatterns Peroxidases proximal heme-ligand signature. 195 205 IPR019793 -
Mch2g1164 341 Pfam Peroxidase 53 299 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g1164 341 Gene3D - 39 337 - -
Mch2g1164 341 Gene3D Peroxidase, domain 2 173 316 - -
Mch2g1164 341 FunFam Peroxidase 39 186 - -
Mch2g1164 341 SUPERFAMILY Heme-dependent peroxidases 36 337 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g1164 341 ProSiteProfiles Plant heme peroxidase family profile. 35 337 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g1164 341 PANTHER PEROXIDASE 72-RELATED 23 335 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g1164 341 ProSitePatterns Peroxidases active site signature. 67 78 IPR019794 GO:0004601(InterPro)
Mch2g1164 341 PRINTS Haem peroxidase superfamily signature 195 210 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g1164 341 PRINTS Haem peroxidase superfamily signature 257 272 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g1164 341 PRINTS Haem peroxidase superfamily signature 67 81 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g1164 341 PRINTS Haem peroxidase superfamily signature 129 146 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g1164 341 PRINTS Haem peroxidase superfamily signature 147 159 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g1164 341 FunFam Peroxidase 173 316 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g1164 Mch-Chr2:7960301 Mch4g2473 Mch-Chr4:25560499 1.65E-86 dispersed
Mch1g1198 Mch-Chr1:14343414 Mch2g1164 Mch-Chr2:7960301 2.83E-122 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g1164 K00430 - csv:101209504 520.776