Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g1199 ATGGCTTCTTCCTCCTCTATCTTTTCGATCTCAACTCTTCTCCTTCTTCTTCTTCCTCTCTCTATTGACTCGCTTTCCTTCAAAATAGATCGATTCAAGCCCAACGAAAACGACATAGTACTTTACCAAGGAGATGCCACTCCTTCTGTGGGAACCGTCGAATTCAACAACATTGACTATCTGTGTCGTGTCGGCCGGGCTGTCTACAAAGACAGTGTCCCAATCTGGGACTCGAAAACAGGAAAAGCCACTGATTTCACAACCCATTTCTCCTTCGTAATTGACACCCAAAATAAGTCCAAATATGGCCATGGAATCGCCTTCTTTTTGGGCCCATCTGGGTTCCAAATCCCTCCGAATTCTGATGGTGGCTTTCTTGGCCTTTTCAACACTTCCAACAGCGATTCCACCGCAAACCAAATACTTCATGTGGAGTTCGATTCTTACTACAATGAAGAATGGGACCCTCCGTTTGAACATGTGGGCATCAACGTTAACTCCATTGCTTCCTCTAATTACACTCGATGGAATGCTAGCTTGCACAGTGGGGACACTGCTGATGTGTGGATCTCGTACAATTCAACTGTGAAAATTTTGAGTGTTGTGTGGAAATATCAGAAGACGGCGAGTTCGTTTGAAAATACCAGCCTTAGTTACCAGATTGATCTGATGAAGGTTCTCCCTCAATGGGCAACTGTGGGATTTTCAGCTGCAACAGGTCTGAATTTAGAGAGACATACGTTATTTTCTTGGGAATTCAATTCCACTTTGGACATCAAGCAAACAAGTGAAAATAATGGGAAGAAAGTTGACATAATTGTGGGTGTCACCGTTTCAATTGGAGTCTTGATTATCATGGCAACAACAACATTTGCACTGCTTTGGAGATTGAAAAAAAAGCAAAAGAGAACAAAATCAGAAAACCCTGAAGAGGTAAATTTGACGTCCATTAACGATGATTTGGAAAGAGGGGCTGGACCCAGAAGGTTTTCTCACAACCTCCTCGCCATGGCCACCAACAACTTCTCCATTGATAGAAAGTTGGGCGAAGGAGGATTTGGTGCAGTATACAGAGGCTACGTACCAGATTTGGATTTGACAATGGCTGTCAAAAAGATCTCAAGGGGTTCTAAACAAGGAAGGAAAGAGTACATAACCGAGGTGAAGATCATTAGTCGGCTGCGCCATCGTAATCTGGTGCAGCTCATGGGGTGGTGCCACGACAAGGGCGAGTTCTTGTTAGTTTATGAGTTCATGCCTCATGGCAGCCTTGATTCTCATCTCTTTGGGAGGAGAACCCCTCTCGCTTGGGCTATGAGATACAAGATTGCATTGGGTCTGGCCTCGGCATTGCTATATCTTCACGAAGAATGGGAACAATGCGTGGTTCATAGAGATATTAAATCGAGTAATGTTATGCTAGATTCGAACTTCAATGTGAAGCTTGGGGATTTTGGGCTGGCTCGATTGATGGACCATGAGTTGGGTGCGCAGACGACTGGGTTGGTGGGGACTTTGGGATACTTGGCTCCTGAATACATAAGCACGGGTAGAGCTAGTAAAGAATCAGATGTGTTTAGTTTTGGAGTCGTGGCTTTGGAGATTGCCACGGGACGAATGTCGAGAAACTCCATGGAAATGGGGTCACATAAGGGTTTGGTGGAGTGGGTTTGGGACCTTTATGGGAGTGGACAAATTCTTGCAGGTATGGATGAGAAAGTACAGTGTGATTACGACGAAAAACAAGTGGAGTGTTTGATGCTTGTTGGACTTTGGAGTGCTTATCCAGACCCTAATCTTAGACCTTCAATAAGGCAAGTAATTCAAGTTCTCAACTTTGAGGCAACGATGCCAAATCTTCCAAGTAAAATGCCGATTGCTGTGTATCATGCTCCTTCCACATCGATGAGCTCAAATGAACCTCCCATTTCAGTAAGTCTCGACGTAGGTCGT 1953 44.55 MASSSSIFSISTLLLLLLPLSIDSLSFKIDRFKPNENDIVLYQGDATPSVGTVEFNNIDYLCRVGRAVYKDSVPIWDSKTGKATDFTTHFSFVIDTQNKSKYGHGIAFFLGPSGFQIPPNSDGGFLGLFNTSNSDSTANQILHVEFDSYYNEEWDPPFEHVGINVNSIASSNYTRWNASLHSGDTADVWISYNSTVKILSVVWKYQKTASSFENTSLSYQIDLMKVLPQWATVGFSAATGLNLERHTLFSWEFNSTLDIKQTSENNGKKVDIIVGVTVSIGVLIIMATTTFALLWRLKKKQKRTKSENPEEVNLTSINDDLERGAGPRRFSHNLLAMATNNFSIDRKLGEGGFGAVYRGYVPDLDLTMAVKKISRGSKQGRKEYITEVKIISRLRHRNLVQLMGWCHDKGEFLLVYEFMPHGSLDSHLFGRRTPLAWAMRYKIALGLASALLYLHEEWEQCVVHRDIKSSNVMLDSNFNVKLGDFGLARLMDHELGAQTTGLVGTLGYLAPEYISTGRASKESDVFSFGVVALEIATGRMSRNSMEMGSHKGLVEWVWDLYGSGQILAGMDEKVQCDYDEKQVECLMLVGLWSAYPDPNLRPSIRQVIQVLNFEATMPNLPSKMPIAVYHAPSTSMSSNEPPISVSLDVGR 651
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 8222773 8225630 + MC02g1023 Mch2g1199 682121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g1199 651 CDD lectin_legume_LecRK_Arcelin_ConA 27 257 IPR001220 GO:0030246(InterPro)
Mch2g1199 651 CDD STKc_IRAK 348 612 - -
Mch2g1199 651 Pfam Protein kinase domain 343 543 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g1199 651 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 258 IPR013320 -
Mch2g1199 651 FunFam L-type lectin-domain containing receptor kinase IX.1 23 266 - -
Mch2g1199 651 FunFam L-type lectin-domain containing receptor kinase IX.1 327 418 - -
Mch2g1199 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch2g1199 651 SUPERFAMILY Protein kinase-like (PK-like) 326 632 IPR011009 -
Mch2g1199 651 Gene3D Transferase(Phosphotransferase) domain 1 419 633 - -
Mch2g1199 651 FunFam Lectin-domain containing receptor kinase A4.3 419 631 - -
Mch2g1199 651 Gene3D Phosphorylase Kinase; domain 1 327 418 - -
Mch2g1199 651 ProSiteProfiles Protein kinase domain profile. 342 620 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g1199 651 PANTHER - 51 621 IPR050528 GO:0005886(PANTHER)
Mch2g1199 651 ProSitePatterns Protein kinases ATP-binding region signature. 348 372 IPR017441 GO:0005524(InterPro)
Mch2g1199 651 Gene3D - 22 281 - -
Mch2g1199 651 SMART serkin_6 342 616 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g1199 651 Pfam Legume lectin domain 24 266 IPR001220 GO:0030246(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g1199 Mch-Chr2:8222773 Mch4g0867 Mch-Chr4:6225886 9.21E-191 dispersed
Mch2g1199 Mch-Chr2:8222773 Mch5g1860 Mch-Chr5:18765416 4.44E-119 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77223 PF00069 Pkinase 1.00E-47 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g1199 - - - 0.0