Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g1216 ATGGCTCCGCCGCTCCCCTCTCCAAATGGAGTCCCTCCTCCGCGCCGCCGTCGCCAAATACGGCCCCACATCACCCTCCGCGTCGGCTCCCACCCCGCCATCTTCATCGCCGACCGCACAATCGCCCACGCCGCCCTCGTCCTCAACGGCGCTGTCTTCGCCCACCGCCCACCGGCTCTTCCCGTCAGAAAGATCGCCTCCAGCAACCAGCACAACATCAATTCCGCCTCCTACGGCCCTCTCTGGCGCCTCCTCCGCCGCAATCTCACCTCCCAAATCCTCCACCCTTCGCGGGTCGCGTCCTACGGGGAAGCTCGCAATTGGGTTTTGGATATTCTCATCAATCGCCTTCTCTCCCACTCTGAATCGGGATTTTCCCCCGTCTCTGTAATCGATCATTTCCAGTACGCCATGTTCTGTTTGCTGGTGCTGATGTGCTTTGGGGATAAGCTCAAGGAAACCAAAATCAAGGAGATCGAGTACGTGCATCGCGCGATGCTTGTGGATTTCAGGCGTTTTGAGGTCCTCAATTTGTGGCCCAAATTGACCAAGATTTTGCTCCGGAGGCGCTGGGAGGAGTTTTTCCAATTGAAGAGAAATCAAGAGAATGTTCTGATTCCTTTGATCGAAGCCCAGAAAAACAGAGACGCTGAAATTGAAGGAGAAGAGGAATTCGTGGTTTCGTATGTTGATACGCTACTCGATTTGAAGATCCCCGACGAGGAAAATCGAAACTTAACGGATGGCGAAATGGTCACTTTATGTTCCGAATTCCTCACCGCTGGGACGGATACCACCTCCATAGCGTTGCAATGGACAATGGCGAATTTGGTGAAATACCCTGAAATCCAACACAAGCTTTTCGCGGAAATCGAAGGGGTTATGGGAAATGGAGGGGAGGAGGTGAAGGAAGGAGATTTGGGGAAGCTTCCATATCTGAAAGCTGTGGTTTTAGAAGGATTAAGAAGACACCCACCAACGCATTTCGTGCCGCCACACGCAGTGAAAGAAGATACGAATCTGGAGAATTATGTGATTCCGAAGAATGGGACGGTAAATTTCATGGTGGCGGAGATGGGTCTGGATCCACAAGTGTGGGAGGATCCGACGGCGTTCAAGCCGGAGAGGTTCATGGAAGGAGAAGAAACGGCGGCGGCGTTGGCGTTTGATGTAACAGGGAGTAAGGAGATAAAAATGATGCCGTTCGGAGCAGGGAGAAGGATTTGTCCAGCGTATGGTGTGGCGATGCTTCATTTGGAATATTTCGTTGCTAATTTGGTTTGGCGATTTGAGTGGAAGGCCGTCGACGGAGACGACGTTGACCTATCGGAGAAGCAAGAGTTGACCGTCGTGATGGAAAACCCTCTGAAAGCCCACATAAGTTCAAGGTTTTAA 1395 52.11 MAPPLPSPNGVPPPRRRRQIRPHITLRVGSHPAIFIADRTIAHAALVLNGAVFAHRPPALPVRKIASSNQHNINSASYGPLWRLLRRNLTSQILHPSRVASYGEARNWVLDILINRLLSHSESGFSPVSVIDHFQYAMFCLLVLMCFGDKLKETKIKEIEYVHRAMLVDFRRFEVLNLWPKLTKILLRRRWEEFFQLKRNQENVLIPLIEAQKNRDAEIEGEEEFVVSYVDTLLDLKIPDEENRNLTDGEMVTLCSEFLTAGTDTTSIALQWTMANLVKYPEIQHKLFAEIEGVMGNGGEEVKEGDLGKLPYLKAVVLEGLRRHPPTHFVPPHAVKEDTNLENYVIPKNGTVNFMVAEMGLDPQVWEDPTAFKPERFMEGEETAAALAFDVTGSKEIKMMPFGAGRRICPAYGVAMLHLEYFVANLVWRFEWKAVDGDDVDLSEKQELTVVMENPLKAHISSRF 464
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 8349989 8351682 + MC02g_new0180 Mch2g1216 682138
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch2g1216 464 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 402 411 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Mch2g1216 464 Gene3D Cytochrome P450 13 464 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1216 464 PRINTS P450 superfamily signature 315 326 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1216 464 PRINTS P450 superfamily signature 400 409 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1216 464 PRINTS P450 superfamily signature 261 278 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1216 464 CDD CYP77_89 24 457 - -
Mch2g1216 464 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 19 461 IPR051103 GO:0016020(PANTHER)|GO:0016709(PANTHER)
Mch2g1216 464 PRINTS E-class P450 group I signature 41 62 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1216 464 PRINTS E-class P450 group I signature 17 36 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1216 464 PRINTS E-class P450 group I signature 399 409 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1216 464 PRINTS E-class P450 group I signature 250 267 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1216 464 PRINTS E-class P450 group I signature 409 432 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1216 464 PRINTS E-class P450 group I signature 270 296 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1216 464 PRINTS E-class P450 group I signature 355 379 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1216 464 SUPERFAMILY Cytochrome P450 16 463 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1216 464 FunFam Cytochrome P450 family protein 16 464 - -
Mch2g1216 464 Pfam Cytochrome P450 20 454 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g1216 Mch-Chr2:8349989 Mch2g1218 Mch-Chr2:8376732 4.90E-245 dispersed
Mch2g1215 Mch-Chr2:8342429 Mch2g1216 Mch-Chr2:8349989 9.84E-256 tandem
Mch2g1216 Mch-Chr2:8349989 Mch2g1217 Mch-Chr2:8364633 1.75E-240 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g1216 K24184 - csv:101204559 660.218