Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch2g1216 | ATGGCTCCGCCGCTCCCCTCTCCAAATGGAGTCCCTCCTCCGCGCCGCCGTCGCCAAATACGGCCCCACATCACCCTCCGCGTCGGCTCCCACCCCGCCATCTTCATCGCCGACCGCACAATCGCCCACGCCGCCCTCGTCCTCAACGGCGCTGTCTTCGCCCACCGCCCACCGGCTCTTCCCGTCAGAAAGATCGCCTCCAGCAACCAGCACAACATCAATTCCGCCTCCTACGGCCCTCTCTGGCGCCTCCTCCGCCGCAATCTCACCTCCCAAATCCTCCACCCTTCGCGGGTCGCGTCCTACGGGGAAGCTCGCAATTGGGTTTTGGATATTCTCATCAATCGCCTTCTCTCCCACTCTGAATCGGGATTTTCCCCCGTCTCTGTAATCGATCATTTCCAGTACGCCATGTTCTGTTTGCTGGTGCTGATGTGCTTTGGGGATAAGCTCAAGGAAACCAAAATCAAGGAGATCGAGTACGTGCATCGCGCGATGCTTGTGGATTTCAGGCGTTTTGAGGTCCTCAATTTGTGGCCCAAATTGACCAAGATTTTGCTCCGGAGGCGCTGGGAGGAGTTTTTCCAATTGAAGAGAAATCAAGAGAATGTTCTGATTCCTTTGATCGAAGCCCAGAAAAACAGAGACGCTGAAATTGAAGGAGAAGAGGAATTCGTGGTTTCGTATGTTGATACGCTACTCGATTTGAAGATCCCCGACGAGGAAAATCGAAACTTAACGGATGGCGAAATGGTCACTTTATGTTCCGAATTCCTCACCGCTGGGACGGATACCACCTCCATAGCGTTGCAATGGACAATGGCGAATTTGGTGAAATACCCTGAAATCCAACACAAGCTTTTCGCGGAAATCGAAGGGGTTATGGGAAATGGAGGGGAGGAGGTGAAGGAAGGAGATTTGGGGAAGCTTCCATATCTGAAAGCTGTGGTTTTAGAAGGATTAAGAAGACACCCACCAACGCATTTCGTGCCGCCACACGCAGTGAAAGAAGATACGAATCTGGAGAATTATGTGATTCCGAAGAATGGGACGGTAAATTTCATGGTGGCGGAGATGGGTCTGGATCCACAAGTGTGGGAGGATCCGACGGCGTTCAAGCCGGAGAGGTTCATGGAAGGAGAAGAAACGGCGGCGGCGTTGGCGTTTGATGTAACAGGGAGTAAGGAGATAAAAATGATGCCGTTCGGAGCAGGGAGAAGGATTTGTCCAGCGTATGGTGTGGCGATGCTTCATTTGGAATATTTCGTTGCTAATTTGGTTTGGCGATTTGAGTGGAAGGCCGTCGACGGAGACGACGTTGACCTATCGGAGAAGCAAGAGTTGACCGTCGTGATGGAAAACCCTCTGAAAGCCCACATAAGTTCAAGGTTTTAA | 1395 | 52.11 | MAPPLPSPNGVPPPRRRRQIRPHITLRVGSHPAIFIADRTIAHAALVLNGAVFAHRPPALPVRKIASSNQHNINSASYGPLWRLLRRNLTSQILHPSRVASYGEARNWVLDILINRLLSHSESGFSPVSVIDHFQYAMFCLLVLMCFGDKLKETKIKEIEYVHRAMLVDFRRFEVLNLWPKLTKILLRRRWEEFFQLKRNQENVLIPLIEAQKNRDAEIEGEEEFVVSYVDTLLDLKIPDEENRNLTDGEMVTLCSEFLTAGTDTTSIALQWTMANLVKYPEIQHKLFAEIEGVMGNGGEEVKEGDLGKLPYLKAVVLEGLRRHPPTHFVPPHAVKEDTNLENYVIPKNGTVNFMVAEMGLDPQVWEDPTAFKPERFMEGEETAAALAFDVTGSKEIKMMPFGAGRRICPAYGVAMLHLEYFVANLVWRFEWKAVDGDDVDLSEKQELTVVMENPLKAHISSRF | 464 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 8349989 | 8351682 | + | MC02g_new0180 | Mch2g1216 | 682138 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch2g1216 | 464 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 402 | 411 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Mch2g1216 | 464 | Gene3D | Cytochrome P450 | 13 | 464 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1216 | 464 | PRINTS | P450 superfamily signature | 315 | 326 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1216 | 464 | PRINTS | P450 superfamily signature | 400 | 409 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1216 | 464 | PRINTS | P450 superfamily signature | 261 | 278 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1216 | 464 | CDD | CYP77_89 | 24 | 457 | - | - | |
| Mch2g1216 | 464 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 19 | 461 | IPR051103 | GO:0016020(PANTHER)|GO:0016709(PANTHER) | |
| Mch2g1216 | 464 | PRINTS | E-class P450 group I signature | 41 | 62 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1216 | 464 | PRINTS | E-class P450 group I signature | 17 | 36 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1216 | 464 | PRINTS | E-class P450 group I signature | 399 | 409 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1216 | 464 | PRINTS | E-class P450 group I signature | 250 | 267 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1216 | 464 | PRINTS | E-class P450 group I signature | 409 | 432 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1216 | 464 | PRINTS | E-class P450 group I signature | 270 | 296 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1216 | 464 | PRINTS | E-class P450 group I signature | 355 | 379 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1216 | 464 | SUPERFAMILY | Cytochrome P450 | 16 | 463 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1216 | 464 | FunFam | Cytochrome P450 family protein | 16 | 464 | - | - | |
| Mch2g1216 | 464 | Pfam | Cytochrome P450 | 20 | 454 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch2g1216 | Mch-Chr2:8349989 | Mch2g1218 | Mch-Chr2:8376732 | 4.90E-245 | dispersed | |
| Mch2g1215 | Mch-Chr2:8342429 | Mch2g1216 | Mch-Chr2:8349989 | 9.84E-256 | tandem | |
| Mch2g1216 | Mch-Chr2:8349989 | Mch2g1217 | Mch-Chr2:8364633 | 1.75E-240 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch2g1216 | K24184 | - | csv:101204559 | 660.218 |