Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch2g1217 | ATGGCTCCGCACATCCCCTCTACAAATGGAATCCATTCTCCGCCGCTCCGTCGCCAAATACGGCCCCATCGTCACCCTCCGCATCGGCCCCCGCCCCACCGTCTTCATCGCCGATCCCACCATTGCCCTCCCTCGTTTCCCTTCGTCTCCACTTTCCAATGGCTCCGCACATCCCCTCTACAAATGGAATCCATCCTCCGCCGCTCCGTCGCCAAATACGGCCCCATCGTCACCCTCCGCATCGGCCCCCGCCCCACCATCTTCATCGCCGATCCCACCATTGCCCACAAAGCTCTGGTTCACAACGGCGCTCTCTTCGCCGACCGTCCACCGGCGGCCCCCTTGTCCAAGATCCTCTCCAGCAACCAGCACAGCATCAATTCCGCCCCTTACGGTCCTCTCTGGCGCCTCCTCCGCCGCAATCTCACTTCCGAAATCCTCCATCCTTCGCGGGTCAGGTCCTACGGTCGAGCTCGCAAGTGGGTTTTGGATATTCTTCTCAATCGGCTCCTCTCTCACTCTGAATCGGGAACCCCCGTTTGTGTGGTCCAGCATTTTCAATACGCCATGTTTTGCTTGTTGGTTCTTATGTGCTTTGGAGATAAGCTGGACGAAACCCAGATCAGAGAGGTCGAGAACGCGCAGCGCATGAAGCTGTTGAATTTTAGGCGTTTTGGCATCCTCAATTTGTGGCCGAAATTGACCAAGATTTTTCTCCCAAATCGCTGGGAGGCGTTTCTCGAACTCAGAAGGAACCAGGAGAGAGTCATAATCCCTTTGATTGAAGCAAGGAGGAAGTCCAAGCAAAACAGAGCAAACAGAGCCAAAATTGGAGGAGAAGAAGAAGAAGAATTCGTAGTGTCATATGTGGATACACTCCTGGATTTGAAGCTCACCGACGAGGAGAACAGAAATCTCACGGATGGCGAAATGGTCACTTTATGCTCCGAATTCCTCACCGCCGGCACCGATACCACCTCTACCGCCTTGCAATGGATAATGGCGAATTTAGTGAAATACCCAGAAATCCAACACAAGCTTTACGCAGAAATCAAGGGAGTTATGGGGGAAAGAGAGGAGGAGGTGAAGGAAGAAGATTTGGGGAAAATTCCATATCTGAAAGCCGTGGTCCTAGAGGGATTGCGCAAACACCCACCTGGGCATTTCCTACAAGCACGAGAAGTGAAGGAAGATATCAAATTGGAAAATTACGTGATACCCAAGAACGCGACAGTGAATTTCATGGCGGCGGAGATGGGTCGGGATCCGAAAGTGTGGGAAGATCCGACGGCGTTTAAGCCGGAGAAATTTCTGAAGGACGGAGAAGAAGTGGCGTTTGACTTAACAGGGAGTAAGGAGATAAAAATGATGCCGTTCGGAGCAGGGAGGAGGATCTGTCCAGGGTATGTTCTGGGGATCCTTCATTTGGAATATTTCGTTGCCAATTTGGTATGGCGGTTTCAGTGGAACGCCGTCGCCGGAGACGACGTGGATATGTCGGAGAAGATAGAGTTCACGTTTGTGATGAAAAATCCTCTCAAAGCTAACATAACTTCGAGGTTTCAAGTTTTTGTTGATTCTGCACGGTTTTGTTTTACCATCTATAATTCCAACTAG | 1617 | 51.33 | MAPHIPSTNGIHSPPLRRQIRPHRHPPHRPPPHRLHRRSHHCPPSFPFVSTFQWLRTSPLQMESILRRSVAKYGPIVTLRIGPRPTIFIADPTIAHKALVHNGALFADRPPAAPLSKILSSNQHSINSAPYGPLWRLLRRNLTSEILHPSRVRSYGRARKWVLDILLNRLLSHSESGTPVCVVQHFQYAMFCLLVLMCFGDKLDETQIREVENAQRMKLLNFRRFGILNLWPKLTKIFLPNRWEAFLELRRNQERVIIPLIEARRKSKQNRANRAKIGGEEEEEFVVSYVDTLLDLKLTDEENRNLTDGEMVTLCSEFLTAGTDTTSTALQWIMANLVKYPEIQHKLYAEIKGVMGEREEEVKEEDLGKIPYLKAVVLEGLRKHPPGHFLQAREVKEDIKLENYVIPKNATVNFMAAEMGRDPKVWEDPTAFKPEKFLKDGEEVAFDLTGSKEIKMMPFGAGRRICPGYVLGILHLEYFVANLVWRFQWNAVAGDDVDMSEKIEFTFVMKNPLKANITSRFQVFVDSARFCFTIYNSN | 538 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 8364633 | 8373529 | + | MC02g_new0181 | Mch2g1217 | 682139 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch2g1217 | 538 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 41 | 519 | IPR051103 | GO:0016020(PANTHER)|GO:0016709(PANTHER) | |
| Mch2g1217 | 538 | PRINTS | P450 superfamily signature | 457 | 466 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1217 | 538 | PRINTS | P450 superfamily signature | 375 | 386 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1217 | 538 | PRINTS | P450 superfamily signature | 321 | 338 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1217 | 538 | MobiDBLite | consensus disorder prediction | 17 | 40 | - | - | |
| Mch2g1217 | 538 | SUPERFAMILY | Cytochrome P450 | 43 | 520 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1217 | 538 | PRINTS | E-class P450 group I signature | 70 | 89 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1217 | 538 | PRINTS | E-class P450 group I signature | 310 | 327 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1217 | 538 | PRINTS | E-class P450 group I signature | 466 | 489 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1217 | 538 | PRINTS | E-class P450 group I signature | 415 | 439 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1217 | 538 | PRINTS | E-class P450 group I signature | 330 | 356 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1217 | 538 | PRINTS | E-class P450 group I signature | 94 | 115 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1217 | 538 | PRINTS | E-class P450 group I signature | 189 | 207 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1217 | 538 | PRINTS | E-class P450 group I signature | 456 | 466 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1217 | 538 | Gene3D | Cytochrome P450 | 34 | 526 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1217 | 538 | FunFam | Cytochrome P450 family protein | 35 | 522 | - | - | |
| Mch2g1217 | 538 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 459 | 468 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Mch2g1217 | 538 | Pfam | Cytochrome P450 | 42 | 512 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1217 | 538 | CDD | CYP77_89 | 72 | 514 | - | - | |
| Mch2g1217 | 538 | MobiDBLite | consensus disorder prediction | 1 | 40 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch2g1217 | Mch-Chr2:8364633 | Mch2g1219 | Mch-Chr2:8379524 | 3.17E-256 | dispersed | |
| Mch2g1216 | Mch-Chr2:8349989 | Mch2g1217 | Mch-Chr2:8364633 | 1.75E-240 | tandem | |
| Mch2g1217 | Mch-Chr2:8364633 | Mch2g1218 | Mch-Chr2:8376732 | 3.99E-268 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch2g1217 | K24184 | - | csv:105434706 | 740.339 |