Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g1218 ATGGCGACCTTCTTCATCTTCTTCGACGTCGCCATCTCCCTCTGCATCTGCTATCTTCTCACCGCCATTTTTGGCCACTTCCGAAGCTCCACCAACCTCCCACCAGGCCCTCCTTCATTCCCCATCCTCACCACTCTCCTATGGCTCCGCCGATCCCCTCTCCAAATCGAATCCCTCCTCCGCACTTTCGTCGCCAAATACGGCCCCGTCGTCACCCTCCGCATCGGCTCCCGCCCCTCCGTCTTCATCGCCGACCGCCACATCGCCCACGCCGCCCTCATCCAGAGCGCCTCTCTCTTCGCCGACCGCCCACCGGCCCTTCCTGTGAGCAGCGTCGTCTCCAGCAACCAGCACAACATCAGCTCCGCCTCCTACGGCCCTCTCTGGCGCCTCCTCCGCCGCAATCTCACCTCCCAAATCCTCCATCCTTCGCGGGTCGCGTCCTACGGTGGAGCTCGCAAGTGGGTCTTGGATATTCTCCTCAATCGCTTTCTCTCCCACCCTGAATCGGGAACCCCCGTTTGTGTTGTCCACCATTTTCAATATGCCATGTTTTGTTTGCTTGTGCTTATGTGCTTTGGGAATAGGCTTGAGGAAACCAAGATCCGTGAAATTGAGAATGTGAATCGAGCGCTACTGTTACAACTTGGGCGTTTCAGGATCCTCGATTTCTTCCCAAAATTGACCAAGCTTTTTCTCCGGAACAGCTGGGAGGCGTTTCTCCAACTCAGAAGGAACCAAGAGAATGTCCTAATCCCTTTGATCGAAGCAAGGAGGAAGGCCAAGCAAAACAGAGCAAACAGAGCCCAAATTGAAAAAGAAGAAGACAAATTCGTGGTGTCATATGTGGATACGCTCCTCGATTTGAAGCTTACCGACGAGGGCAATAGAGACCTAACAGATGGCGAAATGGTCAGTTTATGCTCCGAATTCCTCAACGCCGGCACCGATACCACCTCCACGGCGTTGCAGTGGATAATGGCGAATTTGGTGAAATACCCTGAAATCCAACGCAAACTTTTCGCAGAAATCGAAGGGGTTATGGGAAAAGGAGAGGAGGAGGTGAAGGAAGAAGATTTGGGGAAGCTTCCATATCTGAAAGCTGTGGTTTTAGAAGGATTGAGAAGACACCCACCGGGGCATTTCGTGCTGCCACACGCAGTGAAAGAAGACACAACACTGGAAAATTATGCAATACCGAAAAATGGAACAGTAAATTTCATGGTGGCGCAGATGGGTTGGGATCCAAAAGTGTGGGAAGATCCCATGGCATTCAAGCCAGAAAGGTTCATGAATGGCGGCGGCGGTGGCGAAGGAGAAACAATAGCGTTTGATATAACAGGGAGCAAGGAGATAAAAATGATGCCGTTCGGAGCAGGGAGAAGGATGTGTCCAGGATTGGGTGTGGCGATGCTTCATTTGGAATATTTCATTGCCAATTTGGTTTGGAGATTTGAATGGAAGGCTGTGGCCGGGGACGATGTTGATCTATCGGAGAAGGTGGAGTTCACTGTCGTGATGGAAAAGCCTCTGAAAGCCGCCCTGAATTCGAGGTTTTAA 1560 51.86 MATFFIFFDVAISLCICYLLTAIFGHFRSSTNLPPGPPSFPILTTLLWLRRSPLQIESLLRTFVAKYGPVVTLRIGSRPSVFIADRHIAHAALIQSASLFADRPPALPVSSVVSSNQHNISSASYGPLWRLLRRNLTSQILHPSRVASYGGARKWVLDILLNRFLSHPESGTPVCVVHHFQYAMFCLLVLMCFGNRLEETKIREIENVNRALLLQLGRFRILDFFPKLTKLFLRNSWEAFLQLRRNQENVLIPLIEARRKAKQNRANRAQIEKEEDKFVVSYVDTLLDLKLTDEGNRDLTDGEMVSLCSEFLNAGTDTTSTALQWIMANLVKYPEIQRKLFAEIEGVMGKGEEEVKEEDLGKLPYLKAVVLEGLRRHPPGHFVLPHAVKEDTTLENYAIPKNGTVNFMVAQMGWDPKVWEDPMAFKPERFMNGGGGGEGETIAFDITGSKEIKMMPFGAGRRMCPGLGVAMLHLEYFIANLVWRFEWKAVAGDDVDLSEKVEFTVVMEKPLKAALNSRF 519
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 8376732 8378966 + MC02g_new0182 Mch2g1218 682140
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch2g1218 519 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1218 519 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1218 519 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1218 519 PRINTS P450 superfamily signature 464 475 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1218 519 Coils Coil 254 274 - -
Mch2g1218 519 Gene3D Cytochrome P450 27 519 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1218 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Mch2g1218 519 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1218 519 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1218 519 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1218 519 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1218 519 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1218 519 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1218 519 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1218 519 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1218 519 FunFam Cytochrome P450 family protein 27 519 - -
Mch2g1218 519 CDD CYP77_89 66 512 - -
Mch2g1218 519 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 14 514 IPR051103 GO:0016020(PANTHER)|GO:0016709(PANTHER)
Mch2g1218 519 Pfam Cytochrome P450 34 508 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1218 519 SUPERFAMILY Cytochrome P450 34 518 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g1215 Mch-Chr2:8342429 Mch2g1218 Mch-Chr2:8376732 2.53E-288 dispersed
Mch2g1216 Mch-Chr2:8349989 Mch2g1218 Mch-Chr2:8376732 4.90E-245 dispersed
Mch2g1218 Mch-Chr2:8376732 Mch2g1220 Mch-Chr2:8382519 2.26E-164 dispersed
Mch2g1217 Mch-Chr2:8364633 Mch2g1218 Mch-Chr2:8376732 3.99E-268 tandem
Mch2g1218 Mch-Chr2:8376732 Mch2g1219 Mch-Chr2:8379524 8.62E-282 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g1218 K24184 - csv:101204559 750.74