Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch2g1218 | ATGGCGACCTTCTTCATCTTCTTCGACGTCGCCATCTCCCTCTGCATCTGCTATCTTCTCACCGCCATTTTTGGCCACTTCCGAAGCTCCACCAACCTCCCACCAGGCCCTCCTTCATTCCCCATCCTCACCACTCTCCTATGGCTCCGCCGATCCCCTCTCCAAATCGAATCCCTCCTCCGCACTTTCGTCGCCAAATACGGCCCCGTCGTCACCCTCCGCATCGGCTCCCGCCCCTCCGTCTTCATCGCCGACCGCCACATCGCCCACGCCGCCCTCATCCAGAGCGCCTCTCTCTTCGCCGACCGCCCACCGGCCCTTCCTGTGAGCAGCGTCGTCTCCAGCAACCAGCACAACATCAGCTCCGCCTCCTACGGCCCTCTCTGGCGCCTCCTCCGCCGCAATCTCACCTCCCAAATCCTCCATCCTTCGCGGGTCGCGTCCTACGGTGGAGCTCGCAAGTGGGTCTTGGATATTCTCCTCAATCGCTTTCTCTCCCACCCTGAATCGGGAACCCCCGTTTGTGTTGTCCACCATTTTCAATATGCCATGTTTTGTTTGCTTGTGCTTATGTGCTTTGGGAATAGGCTTGAGGAAACCAAGATCCGTGAAATTGAGAATGTGAATCGAGCGCTACTGTTACAACTTGGGCGTTTCAGGATCCTCGATTTCTTCCCAAAATTGACCAAGCTTTTTCTCCGGAACAGCTGGGAGGCGTTTCTCCAACTCAGAAGGAACCAAGAGAATGTCCTAATCCCTTTGATCGAAGCAAGGAGGAAGGCCAAGCAAAACAGAGCAAACAGAGCCCAAATTGAAAAAGAAGAAGACAAATTCGTGGTGTCATATGTGGATACGCTCCTCGATTTGAAGCTTACCGACGAGGGCAATAGAGACCTAACAGATGGCGAAATGGTCAGTTTATGCTCCGAATTCCTCAACGCCGGCACCGATACCACCTCCACGGCGTTGCAGTGGATAATGGCGAATTTGGTGAAATACCCTGAAATCCAACGCAAACTTTTCGCAGAAATCGAAGGGGTTATGGGAAAAGGAGAGGAGGAGGTGAAGGAAGAAGATTTGGGGAAGCTTCCATATCTGAAAGCTGTGGTTTTAGAAGGATTGAGAAGACACCCACCGGGGCATTTCGTGCTGCCACACGCAGTGAAAGAAGACACAACACTGGAAAATTATGCAATACCGAAAAATGGAACAGTAAATTTCATGGTGGCGCAGATGGGTTGGGATCCAAAAGTGTGGGAAGATCCCATGGCATTCAAGCCAGAAAGGTTCATGAATGGCGGCGGCGGTGGCGAAGGAGAAACAATAGCGTTTGATATAACAGGGAGCAAGGAGATAAAAATGATGCCGTTCGGAGCAGGGAGAAGGATGTGTCCAGGATTGGGTGTGGCGATGCTTCATTTGGAATATTTCATTGCCAATTTGGTTTGGAGATTTGAATGGAAGGCTGTGGCCGGGGACGATGTTGATCTATCGGAGAAGGTGGAGTTCACTGTCGTGATGGAAAAGCCTCTGAAAGCCGCCCTGAATTCGAGGTTTTAA | 1560 | 51.86 | MATFFIFFDVAISLCICYLLTAIFGHFRSSTNLPPGPPSFPILTTLLWLRRSPLQIESLLRTFVAKYGPVVTLRIGSRPSVFIADRHIAHAALIQSASLFADRPPALPVSSVVSSNQHNISSASYGPLWRLLRRNLTSQILHPSRVASYGGARKWVLDILLNRFLSHPESGTPVCVVHHFQYAMFCLLVLMCFGNRLEETKIREIENVNRALLLQLGRFRILDFFPKLTKLFLRNSWEAFLQLRRNQENVLIPLIEARRKAKQNRANRAQIEKEEDKFVVSYVDTLLDLKLTDEGNRDLTDGEMVSLCSEFLNAGTDTTSTALQWIMANLVKYPEIQRKLFAEIEGVMGKGEEEVKEEDLGKLPYLKAVVLEGLRRHPPGHFVLPHAVKEDTTLENYAIPKNGTVNFMVAQMGWDPKVWEDPMAFKPERFMNGGGGGEGETIAFDITGSKEIKMMPFGAGRRMCPGLGVAMLHLEYFIANLVWRFEWKAVAGDDVDLSEKVEFTVVMEKPLKAALNSRF | 519 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 8376732 | 8378966 | + | MC02g_new0182 | Mch2g1218 | 682140 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch2g1218 | 519 | PRINTS | P450 superfamily signature | 368 | 379 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1218 | 519 | PRINTS | P450 superfamily signature | 455 | 464 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1218 | 519 | PRINTS | P450 superfamily signature | 314 | 331 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1218 | 519 | PRINTS | P450 superfamily signature | 464 | 475 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1218 | 519 | Coils | Coil | 254 | 274 | - | - | |
| Mch2g1218 | 519 | Gene3D | Cytochrome P450 | 27 | 519 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1218 | 519 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 457 | 466 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Mch2g1218 | 519 | PRINTS | E-class P450 group I signature | 183 | 201 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1218 | 519 | PRINTS | E-class P450 group I signature | 64 | 83 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1218 | 519 | PRINTS | E-class P450 group I signature | 408 | 432 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1218 | 519 | PRINTS | E-class P450 group I signature | 303 | 320 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1218 | 519 | PRINTS | E-class P450 group I signature | 367 | 385 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1218 | 519 | PRINTS | E-class P450 group I signature | 464 | 487 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1218 | 519 | PRINTS | E-class P450 group I signature | 88 | 109 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1218 | 519 | PRINTS | E-class P450 group I signature | 323 | 349 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1218 | 519 | FunFam | Cytochrome P450 family protein | 27 | 519 | - | - | |
| Mch2g1218 | 519 | CDD | CYP77_89 | 66 | 512 | - | - | |
| Mch2g1218 | 519 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 14 | 514 | IPR051103 | GO:0016020(PANTHER)|GO:0016709(PANTHER) | |
| Mch2g1218 | 519 | Pfam | Cytochrome P450 | 34 | 508 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1218 | 519 | SUPERFAMILY | Cytochrome P450 | 34 | 518 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch2g1215 | Mch-Chr2:8342429 | Mch2g1218 | Mch-Chr2:8376732 | 2.53E-288 | dispersed | |
| Mch2g1216 | Mch-Chr2:8349989 | Mch2g1218 | Mch-Chr2:8376732 | 4.90E-245 | dispersed | |
| Mch2g1218 | Mch-Chr2:8376732 | Mch2g1220 | Mch-Chr2:8382519 | 2.26E-164 | dispersed | |
| Mch2g1217 | Mch-Chr2:8364633 | Mch2g1218 | Mch-Chr2:8376732 | 3.99E-268 | tandem | |
| Mch2g1218 | Mch-Chr2:8376732 | Mch2g1219 | Mch-Chr2:8379524 | 8.62E-282 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch2g1218 | K24184 | - | csv:101204559 | 750.74 |