Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g1219 ATGGAGATCTCCTGGTTCATCTTCACCGTCTCCCTCTGCATCTGCTATTTGCTCAAATCCATTTTTTCCCATTTCCGAAGCTCCACAAATCTCCCACCAGGCCCTCCCTCAATCCCCATCATCACCAATTTCCTATGGCTCCGCCGATCCCCTCTCCAAATGGAGTCCCTCCTCCGCCGCTCCGCCGCCAAATACGGCCCCATCGTCACCCTCCGCATCGGCTCCCGCACCTCCATCTTCGTCGCCGACCGCTCCATCGCCCACAGGGCCCTCGTCCAATCCGGCGCCCTCTTCGCCGACCGCCCCTCCACCCCTCCCTTGACCGGAATCATCTCCGGCAACCGACACAACATCAACACGGCGCCGTACGGCCCCCTCTGGCGTCTCCTCCGCCGCAATCTCACTTCCGAGATCCTCCATCCTTCGCGGGTCCGGTCCTACGGCCTAGCTCGGAAGTGGGTTTTGGATATTCTCATCAATCGCCTTCTCTCTCACTCTGAATCGGGATTTTCCCCCGTCTCTGTAATCGACCATTTTCAGTACGCCATGTTCTGTTTGCTGGTGTTGATGTCGTTCGGAGATAAGCTTGACGAAAATCAGATTCGTGAAATTGAGAGCGTGCAGCGAGAGATGCTGTTGAAACTTGGACGTTTCAGCATCCTCAATTTCTGGCCGAGATTGACCAAGATTTTGCTCCCAAAGCGCTGGGAGGCGTTTGTGGAACTCAGAAGGAAGCAGGAGAGAATCCTAATCCCTTTGATCGAAGCAAGAAGGACGGCCAAGCAAAACAGAGCAAACAGAGCCCAAATTGAAGACGAATTTGTGGTGTCATATGTGGATACGCTTCTCGATTTGGAGCACCCCGACGAGAAGAGAAAGCTCACAGATGAAGAAATCGTGACCATATCCTCCGAGTTACTCAACGCCGGCACCGATACCACCTCCACCGCCCTGCAATGGATAATGGCGAATTTAGTGAAATACCCTGAAATCCAACGCAAACTTTTCGCGGAAATCGAAGGGGTTATGGAAAATGGAGGGGAGGAGGTGAAGGAAGAAGATCTGGGGAAGCTTCCATATCTGAAAGCCGTGGTTTTAGAAGCGTTACGAAGACACCCACCGGCGCATTTTCTGTTACCACACGCAGTGAAAGAAGATACGGTGTTTGAAAATTACCTGATACCCAAAAACGGGACGGTGAATTTCATGGTGGCGGAGATGGGTTTGGATCCGAAGGTGTGGGAAGATCCGATGGCGTTCAAGCCGGAGAGGTTCGTGAAGGTGGCCGGAGAAGAAGAAACGGCGGCGTTTGACATAACGGGGAATAAGGAAATAAAGATGATGCCGTTTGGAGCAGGGAGGAGGATCTGCCCCGGGTTTGGTCTGGCGATTCTTCATTTGGAATATTTCGTTGCGAATTTGATATGGCGGTTTGAGTGGACGGCGGTGGAGGGAGACGGCGTTGATTTGTCGGAGAAACTGGAGTTCACCGTCGTGATGGAAAAGCCTTTGAAAGCAAACATAAATCCGAGGTTTTAA 1539 52.44 MEISWFIFTVSLCICYLLKSIFSHFRSSTNLPPGPPSIPIITNFLWLRRSPLQMESLLRRSAAKYGPIVTLRIGSRTSIFVADRSIAHRALVQSGALFADRPSTPPLTGIISGNRHNINTAPYGPLWRLLRRNLTSEILHPSRVRSYGLARKWVLDILINRLLSHSESGFSPVSVIDHFQYAMFCLLVLMSFGDKLDENQIREIESVQREMLLKLGRFSILNFWPRLTKILLPKRWEAFVELRRKQERILIPLIEARRTAKQNRANRAQIEDEFVVSYVDTLLDLEHPDEKRKLTDEEIVTISSELLNAGTDTTSTALQWIMANLVKYPEIQRKLFAEIEGVMENGGEEVKEEDLGKLPYLKAVVLEALRRHPPAHFLLPHAVKEDTVFENYLIPKNGTVNFMVAEMGLDPKVWEDPMAFKPERFVKVAGEEETAAFDITGNKEIKMMPFGAGRRICPGFGLAILHLEYFVANLIWRFEWTAVEGDGVDLSEKLEFTVVMEKPLKANINPRF 512
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 8379524 8381954 + MC02g_new0183 Mch2g1219 682141
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch2g1219 512 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 10 511 IPR051103 GO:0016020(PANTHER)|GO:0016709(PANTHER)
Mch2g1219 512 Pfam Cytochrome P450 32 503 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1219 512 SUPERFAMILY Cytochrome P450 32 511 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1219 512 CDD CYP77_89 64 505 - -
Mch2g1219 512 Coils Coil 253 273 - -
Mch2g1219 512 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1219 512 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1219 512 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1219 512 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1219 512 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1219 512 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1219 512 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1219 512 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1219 512 FunFam Cytochrome P450 family protein 25 512 - -
Mch2g1219 512 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1219 512 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1219 512 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1219 512 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1219 512 Gene3D Cytochrome P450 25 512 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1219 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g1217 Mch-Chr2:8364633 Mch2g1219 Mch-Chr2:8379524 3.17E-256 dispersed
Mch2g1219 Mch-Chr2:8379524 Mch2g1239 Mch-Chr2:8589764 3.01E-146 dispersed
Mch2g1218 Mch-Chr2:8376732 Mch2g1219 Mch-Chr2:8379524 8.62E-282 tandem
Mch2g1219 Mch-Chr2:8379524 Mch2g1220 Mch-Chr2:8382519 6.59E-157 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g1219 K24184 - csv:101204559 787.334