Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch2g1219 | ATGGAGATCTCCTGGTTCATCTTCACCGTCTCCCTCTGCATCTGCTATTTGCTCAAATCCATTTTTTCCCATTTCCGAAGCTCCACAAATCTCCCACCAGGCCCTCCCTCAATCCCCATCATCACCAATTTCCTATGGCTCCGCCGATCCCCTCTCCAAATGGAGTCCCTCCTCCGCCGCTCCGCCGCCAAATACGGCCCCATCGTCACCCTCCGCATCGGCTCCCGCACCTCCATCTTCGTCGCCGACCGCTCCATCGCCCACAGGGCCCTCGTCCAATCCGGCGCCCTCTTCGCCGACCGCCCCTCCACCCCTCCCTTGACCGGAATCATCTCCGGCAACCGACACAACATCAACACGGCGCCGTACGGCCCCCTCTGGCGTCTCCTCCGCCGCAATCTCACTTCCGAGATCCTCCATCCTTCGCGGGTCCGGTCCTACGGCCTAGCTCGGAAGTGGGTTTTGGATATTCTCATCAATCGCCTTCTCTCTCACTCTGAATCGGGATTTTCCCCCGTCTCTGTAATCGACCATTTTCAGTACGCCATGTTCTGTTTGCTGGTGTTGATGTCGTTCGGAGATAAGCTTGACGAAAATCAGATTCGTGAAATTGAGAGCGTGCAGCGAGAGATGCTGTTGAAACTTGGACGTTTCAGCATCCTCAATTTCTGGCCGAGATTGACCAAGATTTTGCTCCCAAAGCGCTGGGAGGCGTTTGTGGAACTCAGAAGGAAGCAGGAGAGAATCCTAATCCCTTTGATCGAAGCAAGAAGGACGGCCAAGCAAAACAGAGCAAACAGAGCCCAAATTGAAGACGAATTTGTGGTGTCATATGTGGATACGCTTCTCGATTTGGAGCACCCCGACGAGAAGAGAAAGCTCACAGATGAAGAAATCGTGACCATATCCTCCGAGTTACTCAACGCCGGCACCGATACCACCTCCACCGCCCTGCAATGGATAATGGCGAATTTAGTGAAATACCCTGAAATCCAACGCAAACTTTTCGCGGAAATCGAAGGGGTTATGGAAAATGGAGGGGAGGAGGTGAAGGAAGAAGATCTGGGGAAGCTTCCATATCTGAAAGCCGTGGTTTTAGAAGCGTTACGAAGACACCCACCGGCGCATTTTCTGTTACCACACGCAGTGAAAGAAGATACGGTGTTTGAAAATTACCTGATACCCAAAAACGGGACGGTGAATTTCATGGTGGCGGAGATGGGTTTGGATCCGAAGGTGTGGGAAGATCCGATGGCGTTCAAGCCGGAGAGGTTCGTGAAGGTGGCCGGAGAAGAAGAAACGGCGGCGTTTGACATAACGGGGAATAAGGAAATAAAGATGATGCCGTTTGGAGCAGGGAGGAGGATCTGCCCCGGGTTTGGTCTGGCGATTCTTCATTTGGAATATTTCGTTGCGAATTTGATATGGCGGTTTGAGTGGACGGCGGTGGAGGGAGACGGCGTTGATTTGTCGGAGAAACTGGAGTTCACCGTCGTGATGGAAAAGCCTTTGAAAGCAAACATAAATCCGAGGTTTTAA | 1539 | 52.44 | MEISWFIFTVSLCICYLLKSIFSHFRSSTNLPPGPPSIPIITNFLWLRRSPLQMESLLRRSAAKYGPIVTLRIGSRTSIFVADRSIAHRALVQSGALFADRPSTPPLTGIISGNRHNINTAPYGPLWRLLRRNLTSEILHPSRVRSYGLARKWVLDILINRLLSHSESGFSPVSVIDHFQYAMFCLLVLMSFGDKLDENQIREIESVQREMLLKLGRFSILNFWPRLTKILLPKRWEAFVELRRKQERILIPLIEARRTAKQNRANRAQIEDEFVVSYVDTLLDLEHPDEKRKLTDEEIVTISSELLNAGTDTTSTALQWIMANLVKYPEIQRKLFAEIEGVMENGGEEVKEEDLGKLPYLKAVVLEALRRHPPAHFLLPHAVKEDTVFENYLIPKNGTVNFMVAEMGLDPKVWEDPMAFKPERFVKVAGEEETAAFDITGNKEIKMMPFGAGRRICPGFGLAILHLEYFVANLIWRFEWTAVEGDGVDLSEKLEFTVVMEKPLKANINPRF | 512 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 8379524 | 8381954 | + | MC02g_new0183 | Mch2g1219 | 682141 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch2g1219 | 512 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 10 | 511 | IPR051103 | GO:0016020(PANTHER)|GO:0016709(PANTHER) | |
| Mch2g1219 | 512 | Pfam | Cytochrome P450 | 32 | 503 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1219 | 512 | SUPERFAMILY | Cytochrome P450 | 32 | 511 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1219 | 512 | CDD | CYP77_89 | 64 | 505 | - | - | |
| Mch2g1219 | 512 | Coils | Coil | 253 | 273 | - | - | |
| Mch2g1219 | 512 | PRINTS | E-class P450 group I signature | 318 | 344 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1219 | 512 | PRINTS | E-class P450 group I signature | 447 | 457 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1219 | 512 | PRINTS | E-class P450 group I signature | 298 | 315 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1219 | 512 | PRINTS | E-class P450 group I signature | 62 | 81 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1219 | 512 | PRINTS | E-class P450 group I signature | 403 | 427 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1219 | 512 | PRINTS | E-class P450 group I signature | 457 | 480 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1219 | 512 | PRINTS | E-class P450 group I signature | 362 | 380 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1219 | 512 | PRINTS | E-class P450 group I signature | 86 | 107 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1219 | 512 | FunFam | Cytochrome P450 family protein | 25 | 512 | - | - | |
| Mch2g1219 | 512 | PRINTS | P450 superfamily signature | 448 | 457 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1219 | 512 | PRINTS | P450 superfamily signature | 309 | 326 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1219 | 512 | PRINTS | P450 superfamily signature | 363 | 374 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1219 | 512 | PRINTS | P450 superfamily signature | 457 | 468 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1219 | 512 | Gene3D | Cytochrome P450 | 25 | 512 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1219 | 512 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 450 | 459 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch2g1217 | Mch-Chr2:8364633 | Mch2g1219 | Mch-Chr2:8379524 | 3.17E-256 | dispersed | |
| Mch2g1219 | Mch-Chr2:8379524 | Mch2g1239 | Mch-Chr2:8589764 | 3.01E-146 | dispersed | |
| Mch2g1218 | Mch-Chr2:8376732 | Mch2g1219 | Mch-Chr2:8379524 | 8.62E-282 | tandem | |
| Mch2g1219 | Mch-Chr2:8379524 | Mch2g1220 | Mch-Chr2:8382519 | 6.59E-157 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch2g1219 | K24184 | - | csv:101204559 | 787.334 |