Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g1270 AGAGTTACGGGTTTATCTCTCCCGAACTTTCGGCTTCTGGGTTCTGTCTCTCCTGATCTGGGGTTGATTGAAAATCTTCAATCTCTTGATCTTTCTAACAATTCGTTTAATGGGTCTCTCCCGGGGACTCTGTTCAACGCCTCCATGCTCCAGTTTCTTGATTTGTCGGACAATTTGATCTCCGGCGAGGTTCCGTCGCCGGTGAATCGGCTTGGAGATCTCCGTGTTCTGAACCTCTCTGGCAATGCTCTGGCCGGGAAGATTCCGGGTGATCTTGCGAATTTGGGGAACCTCACGGCGGTCTCTTTGAAGGGAAATTACTTTTCCGGTCGGATTCCCGGTGGGTTTAAATCGGTTCAGGTTTTGGATCTGTCTTCGAATTTGATCAATGATTCTCTGCCGTCTGATTTTGGAGGCGACAGTTTACGTTATCTGAACATCTCTTACAACCGAGTTTCCGGCGAAATCCCGCCGGATTTCGCCGCGAAAATTCCGGCCAACGCCACGATTGACCTGTCCTTCAACAATCTCACCGGACAAATCCCTGATTCCGACGTGTTCATGAACCAAGAAGCGAGCTCCTTCACCAGGAACCCCCAACTCTGCGGCGAGCCGACGAGGAGCCCCTGCCCAATTCCTTCCTCGCCAGCGTCGCTGCCGCCGGCGATCGCCGCCATTCCGAAGACGCTAGACCCGAGCACCCCAGAAACCACCTCGCCGGAAAAACAGAGCAAAACAGAGTTCAAACCGGCCACAATAGTAGCCATTGTACTCGGAGACGTCGTCGGCCTCGCAATTCTGTGCGTCCTCTTCTTCTACGTCTACAATTTGAAGAAAAAGAACAAAAAAGTGGAAGCCAATTTGAAAAACGAAGCCAATTTAGCGAAAGAAAGCTGGTCCACGTCTTCCTCTTCCTCATCGTCGTCGGAATCCAGAGGGCTCTCCCGGTGAGGAACTCTGGTGACGGTGGACGGGGAGAAGGAGCTGGAGCTGGAGACGCTGCTGAAGGCGTCGGCGTACATTCTCGGCGCCACCGGGTCCAGCATTACGTACAAGGCGGTGCTGGAAGACGGCACAGCGTTCGCCGTCCGCCGGATCGGAGACGGCGGCGTCGAGAAATACAAAGATTTTGAAAACCAAATTCGGGTTGTTGCTAAATTGGTACACCCGAATCTGGTTCGGATTCGTGGGTTCTATTGGGGTTCCGATGAGAAGCTCATCATCTACGATTTCGTCCCCAATGGCAGCTTGGCCAATGCGAGATACAGGAAAGTGGGTTCATCGCCTTGCCATCTTCCATGGGAGGCCCGATTGAGAATAGCCAAAGGAGTGGCCCGTGGGCTTTCTTATCTCCACGACAAGAAGCACGTCCATGGCAACTTGAGGCCCAGCAACATTCTTTTGGGCTACGACATGGAGCCCAAGATAGGAGATTTCGGTCTCGAGAAGCTCTTCTTGGGCGATGTCAGCTACAAAGCGGGCGGCTCGACTCGGAACTTCGGGAGTAAGCGATCCACTACTTCTCGAGATAGCTTCCAAGACTTCGTCACTGGGCCGAGTCCTGGGCCGAGCCCGAGCTCGATTAGTGGGGTGTCGCCGTACCACGCACCAGAATCGCTTCGGAGCCTGAAGCCCAACTTGAAATGGGATGTGTACTCGTTTGGGGTGATATTGCTCGAGCTACTAACTGGGAAGGTCGTAGTATTGGACGAGATGGGTCAAGGGCTTGGACTTGCCGTCGAAGACACCTGTCGAGCCTTAAGAATGGCTGACATGGCGATCCGTGCTGACGTGGAGGGTCGAGAAGAAGCGTTGTTGTCGTGCTTTAAGTTAGGGTATAGTTGTGCATCTCCAACCCCACAAAAGAGACCATCCATGAAGGAAGCCTTGCAAGTTTTGGAGAAATTTCCAACCCTGTCCACGTCATCACACTATTATGGTATATAA 1947 52.75 RVTGLSLPNFRLLGSVSPDLGLIENLQSLDLSNNSFNGSLPGTLFNASMLQFLDLSDNLISGEVPSPVNRLGDLRVLNLSGNALAGKIPGDLANLGNLTAVSLKGNYFSGRIPGGFKSVQVLDLSSNLINDSLPSDFGGDSLRYLNISYNRVSGEIPPDFAAKIPANATIDLSFNNLTGQIPDSDVFMNQEASSFTRNPQLCGEPTRSPCPIPSSPASLPPAIAAIPKTLDPSTPETTSPEKQSKTEFKPATIVAIVLGDVVGLAILCVLFFYVYNLKKKNKKVEANLKNEANLAKESWSTSSSSSSSSESRGLSRGTLVTVDGEKELELETLLKASAYILGATGSSITYKAVLEDGTAFAVRRIGDGGVEKYKDFENQIRVVAKLVHPNLVRIRGFYWGSDEKLIIYDFVPNGSLANARYRKVGSSPCHLPWEARLRIAKGVARGLSYLHDKKHVHGNLRPSNILLGYDMEPKIGDFGLEKLFLGDVSYKAGGSTRNFGSKRSTTSRDSFQDFVTGPSPGPSPSSISGVSPYHAPESLRSLKPNLKWDVYSFGVILLELLTGKVVVLDEMGQGLGLAVEDTCRALRMADMAIRADVEGREEALLSCFKLGYSCASPTPQKRPSMKEALQVLEKFPTLSTSSHYYGI 647
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 8825039 8828147 - MC02g1069 Mch2g1270 682192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g1270 647 SUPERFAMILY Protein kinase-like (PK-like) 340 635 IPR011009 -
Mch2g1270 647 MobiDBLite consensus disorder prediction 496 531 - -
Mch2g1270 647 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 117 634 IPR050647 -
Mch2g1270 647 FunFam Leucine-rich repeat receptor protein kinase EMS1 16 115 - -
Mch2g1270 647 Pfam Leucine Rich Repeat 25 46 IPR001611 GO:0005515(InterPro)
Mch2g1270 647 Pfam Leucine Rich Repeat 118 138 IPR001611 GO:0005515(InterPro)
Mch2g1270 647 Pfam Leucine Rich Repeat 74 95 IPR001611 GO:0005515(InterPro)
Mch2g1270 647 Pfam Leucine Rich Repeat 50 70 IPR001611 GO:0005515(InterPro)
Mch2g1270 647 Pfam Leucine Rich Repeat 141 161 IPR001611 GO:0005515(InterPro)
Mch2g1270 647 Pfam Protein kinase domain 341 630 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g1270 647 Gene3D Phosphorylase Kinase; domain 1 299 410 - -
Mch2g1270 647 Gene3D Transferase(Phosphotransferase) domain 1 411 643 - -
Mch2g1270 647 FunFam Leucine-rich repeat receptor-like protein kinase 118 212 - -
Mch2g1270 647 ProSiteProfiles Protein kinase domain profile. 335 638 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g1270 647 Gene3D Ribonuclease Inhibitor 117 212 IPR032675 -
Mch2g1270 647 Gene3D Ribonuclease Inhibitor 1 116 IPR032675 -
Mch2g1270 647 MobiDBLite consensus disorder prediction 295 316 - -
Mch2g1270 647 SUPERFAMILY L domain-like 2 206 - -
Mch2g1270 647 CDD STKc_IRAK 341 635 - -
Mch2g1270 647 MobiDBLite consensus disorder prediction 231 245 - -
Mch2g1270 647 MobiDBLite consensus disorder prediction 225 245 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0477 Mch-Chr10:3101135 Mch2g1270 Mch-Chr2:8825039 9.04E-157 dispersed
Mch2g1270 Mch-Chr2:8825039 Mch4g1364 Mch-Chr4:17006297 3.17E-80 dispersed
Mch2g1270 Mch-Chr2:8825039 Mch9g1932 Mch-Chr9:20819970 7.81E-88 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77224 PF00069 Pkinase 4.50E-30 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g1270 - - - 0.0