Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch2g1272 | ATGGGAACCCTCTCCTTCCCAATTTCATCCCCAAAATCCCGACTGCCACTCTCCCGGAATCGAATTGCATTTTCGACGCCTTTTCTTCCAACATCTCTCCCTTCTCATGCATTTCGCGTTCGTAATTTACCCAATCTCCACCTACGCCTCGTTCCCTGCACTGCTGCGGCAGCCGATCAATCAAATCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCATCACCACCACCACCACCACCACCACCACCATGGTCACCACCATTGTGATCATGGCGTGGAGCTGACTGCGCCTCAGAGAGCGGTGGTTGGATTTGCCAAAGCCATTAGGTGGACGGACTTGGCGAATTATCTGAGGGAGCACTTGCAATTATGTTGCTGTTCTATGGCTTTGTTCGTAGCTGCTGCTGTTTGCCCTTATTTGGTGCCCAAGCCCATTGTGAAGCCTCTACAAAATGCTTTCATTGTCGTTGCTTTCCCTCTAGTCGGGGTATCCTCATCCCTTGACGCTTTAACTGATATTAGTGGTGGAAAAGTAAACATCCATGTACTTATGGCTCTTGCAGCCTTTGCATCCATCTTTATGGGGAACTCCTTGGAAGGAGGACTACTACTTGCCATGTTTAATTTATCTCACATTGCGGAAGAGTATTTTACAAGTCGTTCAATGATTGATGTCAAAGAGTTGAAGGAAAACCATCCAGATTCTGCCCTTGTTTTAGATACAGATGATGGTAAGCTTTCCAATATTACAGATTTGTCCTACCAGAAGGTGCCTGTCCATGATGTACAGGTGAATTCCTATATCTTGGTTGGAGCTGGTGAGTCTGTGCCTGTAGATTGTGAAGTTTTCCAAGGTAGCGCTACAGTCACTATTGAGCACCTAACAGGCGAAATAAAACCTTTAGAGATTACGGTTGGAGACAGAGTTCCTGGTGGTGCAAGAAACTTGGATGGTAGGATAATTGTTAAGGCAACAAAGACCTGGAAAGAGTCAACACTGAGTCGAATAGTGAACTTGACTGAAGAGGCACAACTGAATAAACCAAGACTTCAGCGGTGGCTGGATGAATTTGGCGAGCATTATAGCAAAGCAGTTGTAGTTTTGTCCATTGCTATTGCACTCGTTGGTCCAATAATGTTCAAGTGGCCATTTATTGGTACATCAGCTTGCAGAGGATCCGTTTACAGAGCTCTTGGCCTCATGGTGGCAGCATCACCTTGTGCTTTGGCCGTTGCACCATTGGCTTATGCTATTGCAATTAGTTCCTGTGCAAGAAAGGGGATATTGTTGAAAGGTGGCCGTGTATTAGATGCATTAGCTTCTTGTCACACTATAGCATTTGATAAAACTGGGACGTTGACTACTGGAGGTCTTATTTTCAAAGCAATTGAACCAATTTACGGACACAAGGTCAGAGAAAACAGATCAGACTTTGGTCCCTGTTGCATTCCCTGCTGTGAAACTGAAGCCCTTGCTGTAGCAGCTGCCATGGAGAAGGGCACTACTCACCCAATTGGGAGAGCTGTGGTTGACCATAGTATGGGAAAAGACCTCCCATCCTTTTCTGTCCAAAATTTGGAGTATTTTCCTGGTAGAGGACTGGTTGCAACTCTGGATGGTACTGAGTCAGGAACTAGAGGTGGGAAACTATTGAAAGCATCTCTTGGTTCTTTGGATTTCATCACTTCACTCCACAAATCAGAAATTAAATCAAAAGAGATCAAAGAAGCTGTGAGCACATCTTCATATGGAAGTGAATTTGTTCATGCTGCTCTTGCAGTTGATGGGAAGGTAACACTTATTCATCTTGAGGATCGACCTCATCCTAGAGTTTCAAGTGTAATAGTAGAATTAAGAGATGTGGCAAAACTCCATGTTATGATGTTAACTGGAGATCATGAGTCAAGTGCATGGAGAGTGGCGAAGGCAGTGGGCATCAATGAAGTCCACTTCAGTCTGAAGCCTGAAGATAAGCTTAGTCACGTGAAAAGTATCTCTAGGGAGAACGGAGGAGGGCTGATCATGGTTGGTGAAGGCATTAATGATGCTCCAGCACTTGCTGCTGCTACCGTTGGAATAGTGCTTGCTCAACGTGCTAGCGCAACTGCTATAGCTGTGGCAGATGTTCTGTTGCTGCGGGATAACATTTCTGGTGTACCATTTTGTGTTGCCAAGTCCCGCCAGACGACTGCCCTAGTTAAACAGAATGCTAGTCTTGCCTTATTTTCAATATTTTTGGCTTCCCTTCCGGCAGTTTTAGGGTTTCTTCCCTTGTGGTTAACGGTACTTTTGCATGAAGGTGGTACTCTTCTGGTTTGCCTAAATTCGATACGCGCTCTGAATGATCCGAGTTGGTCCTGGAGGCAGGACTTGAAGCAATTGCTAATGGGACTGAAATTTAGGGGGTCGCAGCCAAGCCTTGATACCAGCTCTACCAGTACCACTGTACAATCTTCCCTTTTATAG | 2502 | 45.92 | MGTLSFPISSPKSRLPLSRNRIAFSTPFLPTSLPSHAFRVRNLPNLHLRLVPCTAAAADQSNHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGHHHCDHGVELTAPQRAVVGFAKAIRWTDLANYLREHLQLCCCSMALFVAAAVCPYLVPKPIVKPLQNAFIVVAFPLVGVSSSLDALTDISGGKVNIHVLMALAAFASIFMGNSLEGGLLLAMFNLSHIAEEYFTSRSMIDVKELKENHPDSALVLDTDDGKLSNITDLSYQKVPVHDVQVNSYILVGAGESVPVDCEVFQGSATVTIEHLTGEIKPLEITVGDRVPGGARNLDGRIIVKATKTWKESTLSRIVNLTEEAQLNKPRLQRWLDEFGEHYSKAVVVLSIAIALVGPIMFKWPFIGTSACRGSVYRALGLMVAASPCALAVAPLAYAIAISSCARKGILLKGGRVLDALASCHTIAFDKTGTLTTGGLIFKAIEPIYGHKVRENRSDFGPCCIPCCETEALAVAAAMEKGTTHPIGRAVVDHSMGKDLPSFSVQNLEYFPGRGLVATLDGTESGTRGGKLLKASLGSLDFITSLHKSEIKSKEIKEAVSTSSYGSEFVHAALAVDGKVTLIHLEDRPHPRVSSVIVELRDVAKLHVMMLTGDHESSAWRVAKAVGINEVHFSLKPEDKLSHVKSISRENGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRDNISGVPFCVAKSRQTTALVKQNASLALFSIFLASLPAVLGFLPLWLTVLLHEGGTLLVCLNSIRALNDPSWSWRQDLKQLLMGLKFRGSQPSLDTSSTSTTVQSSLL | 833 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 8862725 | 8871940 | - | MC02g_new0203 | Mch2g1272 | 682194 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch2g1272 | 833 | PANTHER | PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 | 60 | 826 | IPR051949 | - | |
Mch2g1272 | 833 | NCBIfam | heavy metal translocating P-type ATPase | 192 | 790 | IPR027256 | GO:0006812(InterPro)|GO:0016020(InterPro)|GO:0019829(InterPro) | |
Mch2g1272 | 833 | Gene3D | - | 231 | 356 | - | - | |
Mch2g1272 | 833 | SFLD | p-type atpase | 440 | 741 | IPR044492 | - | |
Mch2g1272 | 833 | Gene3D | - | 451 | 739 | IPR023214 | - | |
Mch2g1272 | 833 | MobiDBLite | consensus disorder prediction | 57 | 102 | - | - | |
Mch2g1272 | 833 | Gene3D | - | 469 | 619 | IPR023299 | GO:0000166(InterPro) | |
Mch2g1272 | 833 | SUPERFAMILY | Calcium ATPase, transduction domain A | 262 | 351 | IPR008250 | - | |
Mch2g1272 | 833 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 194 | 743 | IPR023298 | - | |
Mch2g1272 | 833 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 460 | 466 | IPR018303 | - | |
Mch2g1272 | 833 | SFLD | Haloacid Dehalogenase | 440 | 741 | - | - | |
Mch2g1272 | 833 | Pfam | haloacid dehalogenase-like hydrolase | 456 | 701 | - | - | |
Mch2g1272 | 833 | SUPERFAMILY | HAD-like | 456 | 788 | IPR036412 | - | |
Mch2g1272 | 833 | MobiDBLite | consensus disorder prediction | 62 | 99 | - | - | |
Mch2g1272 | 833 | NCBIfam | HAD-IC family P-type ATPase | 261 | 479 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Mch2g1272 | 833 | NCBIfam | HAD-IC family P-type ATPase | 604 | 768 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Mch2g1272 | 833 | PRINTS | P-type cation-transporting ATPase superfamily signature | 688 | 707 | - | - | |
Mch2g1272 | 833 | PRINTS | P-type cation-transporting ATPase superfamily signature | 458 | 472 | - | - | |
Mch2g1272 | 833 | PRINTS | P-type cation-transporting ATPase superfamily signature | 634 | 644 | - | - | |
Mch2g1272 | 833 | PRINTS | P-type cation-transporting ATPase superfamily signature | 712 | 724 | - | - | |
Mch2g1272 | 833 | CDD | P-type_ATPase_HM | 136 | 790 | - | - | |
Mch2g1272 | 833 | Pfam | E1-E2 ATPase | 261 | 438 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch2g1272 | Mch-Chr2:8862725 | Mch2g1625 | Mch-Chr2:13514422 | 0 | dispersed | |
Mch2g1272 | Mch-Chr2:8862725 | Mch6g0507 | Mch-Chr6:3382907 | 2.51E-54 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch2g1272 | K01534 | - | mdm:103453726 | 1137.87 |