Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch2g1277 | ATGGAGGGGGGAACTTTGAGAGATTACTTATACGGTTCGAGGAAGAGCCATGATTATGATCATCATCTTCCATTGTCATGGCAAAAAAGGCTTCAAATCTGCATCGACGCAGCAAAAGGGCTTGATTATTTGCACACTAGTACCGCCGCCGGCGTCATCATCCACCGGGATATTAAAACCACAAACATCTTGCTCGACAAAAACGCCACGGCGAAGGTCGCCGATTTCGGGATATCGAAGTTCGGAGAATCCGACGCCAAAGAATTGTACACCACCATTAGAGGAACTTACGGATATCTAGATCCAGAGTACCTCAACACCGGCCAGCTGACGGAAAAATCCGACGTGTACTCCTTCGGCGTCGTGCTTTTAGAAGTTCTCTCTGGGAGACCTCCGATCGTCAATTCTGTTCGGAGCGACGAAGAGATAAATCTCGCCGACTGGGCGATTCTCTGTCGAAGCAAGGGAGTGGTTGAGAAGCTGATTGATCCGTTTCTTATGGGGACGATCGAAGCGAACTCATTGAGGAAATTTTTGGAAGTTTCAGAGATTTGTGTGAGTGAAGTTGGGGCGGAGAGACCTTCAATGCACGACGTGGTGTATGGTTTGGAATGTGCTTTGAAGTTTCAGCTCAAACCTGTTGTCAGCGAGAAGGCGTTTGACTGCAACACCACCATCGGTTAA | 684 | 48.25 | MEGGTLRDYLYGSRKSHDYDHHLPLSWQKRLQICIDAAKGLDYLHTSTAAGVIIHRDIKTTNILLDKNATAKVADFGISKFGESDAKELYTTIRGTYGYLDPEYLNTGQLTEKSDVYSFGVVLLEVLSGRPPIVNSVRSDEEINLADWAILCRSKGVVEKLIDPFLMGTIEANSLRKFLEVSEICVSEVGAERPSMHDVVYGLECALKFQLKPVVSEKAFDCNTTIG | 227 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 8909094 | 8910741 | - | MC02g_new0208 | Mch2g1277 | 682199 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch2g1277 | 227 | PANTHER | OS07G0166700 PROTEIN | 1 | 210 | IPR045272 | GO:0004672(PANTHER)|GO:0004714(InterPro)|GO:0005886(PANTHER)|GO:0006468(InterPro)|GO:0009506(PANTHER)|GO:0046777(PANTHER) | |
| Mch2g1277 | 227 | FunFam | Receptor-like protein kinase FERONIA | 1 | 223 | - | - | |
| Mch2g1277 | 227 | SMART | serkin_6 | 1 | 179 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Mch2g1277 | 227 | ProSiteProfiles | Protein kinase domain profile. | 1 | 215 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Mch2g1277 | 227 | SUPERFAMILY | Protein kinase-like (PK-like) | 1 | 201 | IPR011009 | - | |
| Mch2g1277 | 227 | Pfam | Protein kinase domain | 21 | 147 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Mch2g1277 | 227 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 219 | - | - | |
| Mch2g1277 | 227 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 53 | 65 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch2g1277 | Mch-Chr2:8909094 | Mch9g0371 | Mch-Chr9:2752302 | 8.48E-72 | dispersed | |
| Mch2g1276 | Mch-Chr2:8902422 | Mch2g1277 | Mch-Chr2:8909094 | 2.35E-113 | tandem |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 77226 | PF00069 | Pkinase | 6.50E-28 | CL0016 | Mch | PK |
Pathway information