Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch2g1281 | ATGGATTCTCTCTCTGTTTTCGCTCTGCTCCTCTTCGCACTCGCCTCAATCCTTTTTCGGCAGCAGATCAGAGCCCCGCGGCGGAATCTACCGCCGAGCCCGCCGTCTGTTCCGATCATCGGCCACCTCCGCCTCCTCCGCCGCCCCGTCCACCGCAACTTCCAGAAGATCGCCGCCGAATACGGCCCCATTTTCTCTCTCAGATTCGGATCTCGCCTCGCCGTCGTAGTCTCTTCACTCGACACAGCCGAAGAATGCCTAACGAAGAACGACGTCGTCTTCGCCAACCGGCCGCGCCTCATCATCGGCAAGCACCTCGGCTACAACCACACCACCATGGCCGCCGCGCCGTACGGCGCCCACTGGCGGAACCTCCGGCGCCTCACCGCCAGCGAGCTCTTCTCCACGGCCCGCCTCGGCTCCTCTCTGAGCATCCGGAAGGAGGAAATCCGGCGGGTGCTGCTGAAGCTCCGGGCCGGGTCGGGGTCCGGGTCGGGCGGGGACTTCGCGAAGGCGGAGTTGAAATCGATGTTCTCGGAGGTGACGTTCAACGTGGTGATGAGGATGGTGGCCGGAAAACGGTACTACGGCGAGGAGGTCTCCGACGAGGCGGAGGCGCGTGAGTTCAGTGAGCTGATGGAGGAGATTTCGTGCCACGGAGGAGCGTCGAACTGGGTGGATTTCATGCCGATTCTGAGATGGATTGGGTGCGACGGCGGATATGAAAGGAATTTGGCGAAATTGATGAAGAGGACGGATAAATTCATGGAGGCGCTGGTTGAAGAAGCGCGGCACAACAAGAAGAATTCAGCGATTGAGAGGAAGAATTGTTGTTCTCTGCTGGATCGTCTTCTGGAATTGCAGGAGTCGGAACCACAGTATTATACCGATCAGATTGTTAAAGGCCTCGTTCTGGTTTTGCTGCGTGCAGGAACAGACTCGACGTCCGTGACCATGAACTGGGCAATGACCCAATTGCTCAACAATCCAGAAGTGTTGACGAAAGCCAAAGCTGAGTTGGACACAAAGGTTGGTCAAGATCGACTCGTCGACGAATCCGATCTCGCCAACCTCAAATACCTCCAAGCCATTGTTTTCGAGACCCTCCGCTTGCACCCGCCTGCTCCGATGCTCATCGCACATTACTCCTCCTCCGACTGCACAGTCGCTGGCTACCACATTCCACATGACACAATATTGTTGGTCAATGCGTGGGCGATTCATCGAGACCCGAAGCTGTGGGACGACCCGACGAGCTTTCGGCCGGAGAGGTTTCTGGGATCAGCAGCAAATGAGTTGCTGTCCAACAAACTTATTGCATTTGGGCTCGGAAGGAGGGCCTGTCCTGGAGCAACTATGGGCGAACGGTTTGTGGGACTCACATTGGCGCTGATGATTCAATGTTATGAGTGGAAGAAAAGTGGAGAAGAAAATATTGACATGGGAGAGGGCGGCGGCATTACCATTCTCAAAGCTAAGCCTTTGGAAGTTATGTGTAAAGCTCGCCCTGTTATGGATAAAGTTCATGTTAAAGCGTAA | 1539 | 55.75 | MDSLSVFALLLFALASILFRQQIRAPRRNLPPSPPSVPIIGHLRLLRRPVHRNFQKIAAEYGPIFSLRFGSRLAVVVSSLDTAEECLTKNDVVFANRPRLIIGKHLGYNHTTMAAAPYGAHWRNLRRLTASELFSTARLGSSLSIRKEEIRRVLLKLRAGSGSGSGGDFAKAELKSMFSEVTFNVVMRMVAGKRYYGEEVSDEAEAREFSELMEEISCHGGASNWVDFMPILRWIGCDGGYERNLAKLMKRTDKFMEALVEEARHNKKNSAIERKNCCSLLDRLLELQESEPQYYTDQIVKGLVLVLLRAGTDSTSVTMNWAMTQLLNNPEVLTKAKAELDTKVGQDRLVDESDLANLKYLQAIVFETLRLHPPAPMLIAHYSSSDCTVAGYHIPHDTILLVNAWAIHRDPKLWDDPTSFRPERFLGSAANELLSNKLIAFGLGRRACPGATMGERFVGLTLALMIQCYEWKKSGEENIDMGEGGGITILKAKPLEVMCKARPVMDKVHVKA | 512 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 8924736 | 8927451 | - | MC02g_new0211 | Mch2g1281 | 682203 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch2g1281 | 512 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 441 | 450 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Mch2g1281 | 512 | SUPERFAMILY | Cytochrome P450 | 31 | 502 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1281 | 512 | Gene3D | Cytochrome P450 | 23 | 511 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1281 | 512 | PRINTS | P450 superfamily signature | 439 | 448 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1281 | 512 | PRINTS | P450 superfamily signature | 310 | 327 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1281 | 512 | PRINTS | P450 superfamily signature | 363 | 374 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1281 | 512 | FunFam | Cytochrome P450 family protein | 22 | 505 | - | - | |
| Mch2g1281 | 512 | PANTHER | CYTOCHROME P450 82C3-RELATED | 8 | 502 | IPR050651 | - | |
| Mch2g1281 | 512 | PRINTS | E-class P450 group I signature | 299 | 316 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1281 | 512 | PRINTS | E-class P450 group I signature | 82 | 103 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1281 | 512 | PRINTS | E-class P450 group I signature | 438 | 448 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1281 | 512 | PRINTS | E-class P450 group I signature | 448 | 471 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1281 | 512 | PRINTS | E-class P450 group I signature | 319 | 345 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1281 | 512 | PRINTS | E-class P450 group I signature | 181 | 199 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1281 | 512 | PRINTS | E-class P450 group I signature | 58 | 77 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1281 | 512 | PRINTS | E-class P450 group I signature | 362 | 380 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1281 | 512 | PRINTS | E-class P450 group I signature | 403 | 427 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1281 | 512 | CDD | CYP81 | 62 | 495 | - | - | |
| Mch2g1281 | 512 | Pfam | Cytochrome P450 | 31 | 488 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch2g1281 | Mch-Chr2:8924736 | Mch2g1283 | Mch-Chr2:8947323 | 1.94E-169 | dispersed | |
| Mch9g2057 | Mch-Chr9:21704390 | Mch2g1281 | Mch-Chr2:8924736 | 2.44E-13 | dispersed | |
| Mch2g1281 | Mch-Chr2:8924736 | Mch2g1282 | Mch-Chr2:8932554 | 8.55E-118 | tandem | |
| Mch11g0338 | Mch-Chr11:2084976 | Mch2g1281 | Mch-Chr2:8924736 | 2.02E-166 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch2g1281 | K13260 | - | csv:101210967 | 664.455 |