Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g1282 ATGCAGGTTTTGCTGCGTGCGGGAACAGACACATCATCCGTGACTTTGAATTGGGCAATGACCCAATTGCTGAACAATCCAGAGGTGCTGGCAAAAGCCAAAGCTGAGTTGGACGCAAACGTCGGTCAAGATCGATTCGTCGACGAATCCGATCTCGCCAACCTCAACTTCCTTCAAGCCACTGTATCCGAGACCCTGCGCTTGCAACCGGCTGCTCCGATGCTCCTCTCACATTACTCCTCCGAGGACTGCACGGTTGCTGGCTACGACATTCCACGTGGGACTACGTTGTTGGTCAATGCATGGGCGATTCACCGGGACCCGAAGCTGTGGGACGACCCGACGAGGTTTCGGCCGGAGAGGTTTTTGGGGTCAGCAGCAAATGAGTCGCAGTGCAACAAAGTTATTGCATTTGGGCTTGGAAGGAGGGCCTGTCCTGGAGAAACTATGGCTCTACGTTTTGTGGGACTCACTTTGGGGCTGCTCATTCAGTGTTATGAGTGGAAAAAGGGTGGGGAAGAAGAGATTGACATGGGCCAAGGAGGAGGCATTACAATTCACAAAGCTAAGCCTTTGGAGGTTATGTGTAAACCTCGCCCGGTTATGGATAAACTTCAGTTCAATGCTCTGCATAAAATTTGA 642 51.56 MQVLLRAGTDTSSVTLNWAMTQLLNNPEVLAKAKAELDANVGQDRFVDESDLANLNFLQATVSETLRLQPAAPMLLSHYSSEDCTVAGYDIPRGTTLLVNAWAIHRDPKLWDDPTRFRPERFLGSAANESQCNKVIAFGLGRRACPGETMALRFVGLTLGLLIQCYEWKKGGEEEIDMGQGGGITIHKAKPLEVMCKPRPVMDKLQFNALHKI 213
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 8932554 8933195 - MC02g_new0212 Mch2g1282 682204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g1282 213 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 138 147 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Mch2g1282 213 Pfam Cytochrome P450 4 187 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1282 213 Gene3D Cytochrome P450 1 202 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1282 213 PRINTS E-class P450 group I signature 16 42 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1282 213 PRINTS E-class P450 group I signature 145 168 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1282 213 PRINTS E-class P450 group I signature 135 145 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1282 213 PRINTS E-class P450 group I signature 100 124 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1282 213 PRINTS E-class P450 group I signature 59 77 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1282 213 PANTHER CYTOCHROME P450 82C3-RELATED 4 199 IPR050651 -
Mch2g1282 213 PRINTS P450 superfamily signature 145 156 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1282 213 PRINTS P450 superfamily signature 7 24 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1282 213 PRINTS P450 superfamily signature 136 145 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1282 213 PRINTS P450 superfamily signature 60 71 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1282 213 SUPERFAMILY Cytochrome P450 3 199 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g1282 Mch-Chr2:8932554 Mch11g0338 Mch-Chr11:2084976 1.25E-76 dispersed
Mch2g1281 Mch-Chr2:8924736 Mch2g1282 Mch-Chr2:8932554 8.55E-118 tandem
Mch2g1282 Mch-Chr2:8932554 Mch2g1283 Mch-Chr2:8947323 7.97E-76 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g1282 K13260 - csv:101210967 315.464