Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g1285 ATGGCAGTTGCCCCTTACGGGGACCATTGGCGAAACCTTCGCCGGATTGGCGCCCTTGAGATTTTCTCAACAACTCGAATGAATCTGTTCTCGGGGATTCGAGAAGGCGAAGTTAAACGTTTGATGCGTAAACGCAGTTCGTTGGTAGAATTCACGGTGGTTGAGCCGGGGTCGATGATTTTGGATCTTATGTTCAATATCATTATGAGAATGGTGGCTGGGAAGAAGTATTATGAAGACGACATGTCGAATGATGGAAAATCGAGGAAATTTAGAGAGGTGGTGAAAGAAATTATGGCGCATGGTGGGGCAACGAATCCAGGAGATTTCATACCTATATGGAATTGGATTGATCCTACTGGTTTGGAAAAGAAGATTATGAAGCTTGGAAACACAATGGATGAACTTCTTCAAGAACTTATTGATGAGATAAGGAATCAGAAAGGTGAAGGCAACACTATGATTGAGCATTTACTTCCCTTGCAGAAAACTGAGCCTGAAAATCATAGTGACCTTATTATCAAAGGCCTCATACAAATCATATTAGTAGCAGGAATTGACACTACCGGAGTGACATTAGAATGGACGCTCTCCCATCTACTCAACAATCCAGAGGTGTTAGAGAAGGCAAAAACTGAGATAGACAATTTTGTTGGACAAGAGCGTCTGGTTAATGAAGCTGATCTGTCGAGTTTAAGTTATGTGCAAGGAATAATTTCTGAGACTCTGAGACTAACCCCAGCAGCTCCCTTGCTTGTGCCGCATTGCCCATCTGAAGATTGTAAAATAGGAGGGTATGATGTACCACGGGATGCAATTGTATTGATTAATGCTTGGGCTATTCATAGAGATCCCGAACTATGGGAAGATGCCACCAGCTTTAAGCCTGAAAGGCATCCCGAACTATGGGAAGATGCCACCAGCTTTAAGCCTGAAAGGCATACAAATGCGATTGGAGTTGACTCGTACAAACTATTACCATTTGGTTTGGGGAGGAGAGCCTGCCCTGGAATGGGAATGGCTCAACGTGTAGCTGTCTTGACTTTGGCATCGTTGATTCAATGCTTTGAGTGGAAAAGAGTGAGCTTGACTTTGGCATCGTTGATTCAATGCTTTGAGTGGAAAAGAGTGAGCTGCTCATTGGTTGACATGACTGAAGGTGAAGGAATCACTATGCCCAAAGCTCAACCATTGATAGTCAAGTGTAGACCACGTCCAATCATGAGAGCTATTCTCAACCAAGTGTAG 1248 43.59 MAVAPYGDHWRNLRRIGALEIFSTTRMNLFSGIREGEVKRLMRKRSSLVEFTVVEPGSMILDLMFNIIMRMVAGKKYYEDDMSNDGKSRKFREVVKEIMAHGGATNPGDFIPIWNWIDPTGLEKKIMKLGNTMDELLQELIDEIRNQKGEGNTMIEHLLPLQKTEPENHSDLIIKGLIQIILVAGIDTTGVTLEWTLSHLLNNPEVLEKAKTEIDNFVGQERLVNEADLSSLSYVQGIISETLRLTPAAPLLVPHCPSEDCKIGGYDVPRDAIVLINAWAIHRDPELWEDATSFKPERHPELWEDATSFKPERHTNAIGVDSYKLLPFGLGRRACPGMGMAQRVAVLTLASLIQCFEWKRVSLTLASLIQCFEWKRVSCSLVDMTEGEGITMPKAQPLIVKCRPRPIMRAILNQV 415
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 8975229 8977162 - MC02g_new0215 Mch2g1285 682207
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch2g1285 415 Pfam Cytochrome P450 6 298 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1285 415 Pfam Cytochrome P450 299 360 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1285 415 SUPERFAMILY Cytochrome P450 298 361 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1285 415 Gene3D Cytochrome P450 1 298 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1285 415 PANTHER CYTOCHROME P450 82C3-RELATED 361 405 IPR050651 -
Mch2g1285 415 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 328 337 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Mch2g1285 415 PRINTS P450 superfamily signature 237 248 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1285 415 PRINTS P450 superfamily signature 184 201 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1285 415 PRINTS P450 superfamily signature 326 335 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1285 415 SUPERFAMILY Cytochrome P450 2 299 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1285 415 Gene3D Cytochrome P450 299 403 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1285 415 PRINTS E-class P450 group I signature 236 254 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1285 415 PRINTS E-class P450 group I signature 325 335 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1285 415 PRINTS E-class P450 group I signature 335 358 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1285 415 PRINTS E-class P450 group I signature 63 81 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1285 415 PRINTS E-class P450 group I signature 193 219 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1285 415 PRINTS E-class P450 group I signature 173 190 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g1285 Mch-Chr2:8975229 Mch2g1289 Mch-Chr2:9026838 6.78E-193 dispersed
Mch2g1284 Mch-Chr2:8965000 Mch2g1285 Mch-Chr2:8975229 1.48E-23 tandem
Mch2g1285 Mch-Chr2:8975229 Mch2g1286 Mch-Chr2:8990337 8.42E-234 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g1285 K13260 - csv:101204413 571.622