Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch2g1285 | ATGGCAGTTGCCCCTTACGGGGACCATTGGCGAAACCTTCGCCGGATTGGCGCCCTTGAGATTTTCTCAACAACTCGAATGAATCTGTTCTCGGGGATTCGAGAAGGCGAAGTTAAACGTTTGATGCGTAAACGCAGTTCGTTGGTAGAATTCACGGTGGTTGAGCCGGGGTCGATGATTTTGGATCTTATGTTCAATATCATTATGAGAATGGTGGCTGGGAAGAAGTATTATGAAGACGACATGTCGAATGATGGAAAATCGAGGAAATTTAGAGAGGTGGTGAAAGAAATTATGGCGCATGGTGGGGCAACGAATCCAGGAGATTTCATACCTATATGGAATTGGATTGATCCTACTGGTTTGGAAAAGAAGATTATGAAGCTTGGAAACACAATGGATGAACTTCTTCAAGAACTTATTGATGAGATAAGGAATCAGAAAGGTGAAGGCAACACTATGATTGAGCATTTACTTCCCTTGCAGAAAACTGAGCCTGAAAATCATAGTGACCTTATTATCAAAGGCCTCATACAAATCATATTAGTAGCAGGAATTGACACTACCGGAGTGACATTAGAATGGACGCTCTCCCATCTACTCAACAATCCAGAGGTGTTAGAGAAGGCAAAAACTGAGATAGACAATTTTGTTGGACAAGAGCGTCTGGTTAATGAAGCTGATCTGTCGAGTTTAAGTTATGTGCAAGGAATAATTTCTGAGACTCTGAGACTAACCCCAGCAGCTCCCTTGCTTGTGCCGCATTGCCCATCTGAAGATTGTAAAATAGGAGGGTATGATGTACCACGGGATGCAATTGTATTGATTAATGCTTGGGCTATTCATAGAGATCCCGAACTATGGGAAGATGCCACCAGCTTTAAGCCTGAAAGGCATCCCGAACTATGGGAAGATGCCACCAGCTTTAAGCCTGAAAGGCATACAAATGCGATTGGAGTTGACTCGTACAAACTATTACCATTTGGTTTGGGGAGGAGAGCCTGCCCTGGAATGGGAATGGCTCAACGTGTAGCTGTCTTGACTTTGGCATCGTTGATTCAATGCTTTGAGTGGAAAAGAGTGAGCTTGACTTTGGCATCGTTGATTCAATGCTTTGAGTGGAAAAGAGTGAGCTGCTCATTGGTTGACATGACTGAAGGTGAAGGAATCACTATGCCCAAAGCTCAACCATTGATAGTCAAGTGTAGACCACGTCCAATCATGAGAGCTATTCTCAACCAAGTGTAG | 1248 | 43.59 | MAVAPYGDHWRNLRRIGALEIFSTTRMNLFSGIREGEVKRLMRKRSSLVEFTVVEPGSMILDLMFNIIMRMVAGKKYYEDDMSNDGKSRKFREVVKEIMAHGGATNPGDFIPIWNWIDPTGLEKKIMKLGNTMDELLQELIDEIRNQKGEGNTMIEHLLPLQKTEPENHSDLIIKGLIQIILVAGIDTTGVTLEWTLSHLLNNPEVLEKAKTEIDNFVGQERLVNEADLSSLSYVQGIISETLRLTPAAPLLVPHCPSEDCKIGGYDVPRDAIVLINAWAIHRDPELWEDATSFKPERHPELWEDATSFKPERHTNAIGVDSYKLLPFGLGRRACPGMGMAQRVAVLTLASLIQCFEWKRVSLTLASLIQCFEWKRVSCSLVDMTEGEGITMPKAQPLIVKCRPRPIMRAILNQV | 415 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 8975229 | 8977162 | - | MC02g_new0215 | Mch2g1285 | 682207 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch2g1285 | 415 | Pfam | Cytochrome P450 | 6 | 298 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1285 | 415 | Pfam | Cytochrome P450 | 299 | 360 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1285 | 415 | SUPERFAMILY | Cytochrome P450 | 298 | 361 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1285 | 415 | Gene3D | Cytochrome P450 | 1 | 298 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1285 | 415 | PANTHER | CYTOCHROME P450 82C3-RELATED | 361 | 405 | IPR050651 | - | |
| Mch2g1285 | 415 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 328 | 337 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Mch2g1285 | 415 | PRINTS | P450 superfamily signature | 237 | 248 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1285 | 415 | PRINTS | P450 superfamily signature | 184 | 201 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1285 | 415 | PRINTS | P450 superfamily signature | 326 | 335 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1285 | 415 | SUPERFAMILY | Cytochrome P450 | 2 | 299 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1285 | 415 | Gene3D | Cytochrome P450 | 299 | 403 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1285 | 415 | PRINTS | E-class P450 group I signature | 236 | 254 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1285 | 415 | PRINTS | E-class P450 group I signature | 325 | 335 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1285 | 415 | PRINTS | E-class P450 group I signature | 335 | 358 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1285 | 415 | PRINTS | E-class P450 group I signature | 63 | 81 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1285 | 415 | PRINTS | E-class P450 group I signature | 193 | 219 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1285 | 415 | PRINTS | E-class P450 group I signature | 173 | 190 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch2g1285 | Mch-Chr2:8975229 | Mch2g1289 | Mch-Chr2:9026838 | 6.78E-193 | dispersed | |
| Mch2g1284 | Mch-Chr2:8965000 | Mch2g1285 | Mch-Chr2:8975229 | 1.48E-23 | tandem | |
| Mch2g1285 | Mch-Chr2:8975229 | Mch2g1286 | Mch-Chr2:8990337 | 8.42E-234 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch2g1285 | K13260 | - | csv:101204413 | 571.622 |