Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch2g1286 | ATGGATATTCTCTTGCTCTCCATTTTTCTCTCCCTTCTCCTTGCCTTCCTCCTCTTTCGACCTCATCGTCGGAACAACCTCCCACCGAGCCCGCTTTTTTCTCTTCCGATAATCGGCCATCTCCATCTCGTCAAACACTCCGTACACCGAACACTTCACAACCTCTCCCACAACTATGGCCGTGTCTTCTCCCTCCGATTCGGTTCACGTCTCGTCGTAGTTGTATCATCTCCTTCTGTCGTGCAAGAATGCTTTACGAAGAACGATATCATTCTCGCAAATCGGCCGCTATTGGACACTGCAAAACACTTAGCCTACAACCAGACCACCATGGCAGTTGCCCCTTACGGTGACCATTGGCGACACCTTCGCCGCATCGGCGCCCTTGAGATCTTTTCAACAACTCGAATGAATCTGTTCTTGGGGATTCGAGAAGGTGAAGTTAAACGTTTGATGCGTAAATTATGCGGCAGTTCGTTTGTAGAATTCACGGTGGTGGAGCCGGGGTCGATGATTTTGGATCTTATGTTCAATATCATTATGAGAATCGTGGCTGGGAAGAAGTATTATGATGACGACATGTCGAATGATGGAAAATCGAGGAAATTTAGAGAGGCGGTGAAAGAAACTATGGCGCATGGTGGGGCAACGAATCCAGGAGACTTCATACCTATATGGAATTGGATTGATCCTACTGGTTTGGAAAAGAAGATGATGAAGCTTGGACACACAATGGATGAACTTCTTCAAGAACTTCTTGATGAGATAAGGAATCAGAAAAATGAAGGCAATACTATGATTGAGCATTTACTTTGCTTGCAAAAATCTGAGCCTGAAAATCATAGTGACCTAATTATCAAAGGCCTCGTACATGTCATATTAATAGCAGGAATTGATACGATTGGAGTGACGTTAGAATGGGCGCTCTCCCATCTACTCAACAATCCGGAGGTGTTAGAGAAAGCAAAAGCCGAGATAGATAATTCCATTGGACAAGAGCGTATGGTCAATGAAGCTGATTTGTCAAGTTTAAGTTATGTGCAAGGAATAATTTTTGAGACTCTACGACTAACCCCAGCAGCTCCTTTGCTTGTGGCGCATTGCCCATCTGAAGATTGTAAAATAGGAGGGTATGATATACCACGGGATGCAATTGTATTGATTAATGCTTGGGCTATTCATAGAGATCCTGAACTATGGGAAGATGCCACCAGCTTTAGGCCTGAAAGGCATACAAATGCAATTGGAGTTGACTCATACAAATTATTACCATTTGGTTTGGGGAGGAGGGCCTGCCCTGGAATGGGAATGGCTCAACGTGTAGTTGGCTTGACTTTGGCATCGTTGATTCAATGCTTTGAGTGGAAAAGAGCGAGTAGCTTATTGGTTGACATGACTGAAGGTGGAGGACTCACTATGCCCAAAGCTCAACCATTGGTAGCCAACATGGAAATGGAAAACCTTTTGCTTTATCTATGTGTTTCTCTAACCACATTCATATTAGCTCTAATATTTCTTCTTCGATCCCCCAAAAATCTTCCCCCAAGTCCTCCTTTTTCTCTCCCACTTATAGGCCATCTCTATCTCATAAAACGTCCCGTCCATCGAACCCTTCAAAGCCTCTCGGAGAA | 1631 | 44.27 | MDILLLSIFLSLLLAFLLFRPHRRNNLPPSPLFSLPIIGHLHLVKHSVHRTLHNLSHNYGRVFSLRFGSRLVVVVSSPSVVQECFTKNDIILANRPLLDTAKHLAYNQTTMAVAPYGDHWRHLRRIGALEIFSTTRMNLFLGIREGEVKRLMRKLCGSSFVEFTVVEPGSMILDLMFNIIMRIVAGKKYYDDDMSNDGKSRKFREAVKETMAHGGATNPGDFIPIWNWIDPTGLEKKMMKLGHTMDELLQELLDEIRNQKNEGNTMIEHLLCLQKSEPENHSDLIIKGLVHVILIAGIDTIGVTLEWALSHLLNNPEVLEKAKAEIDNSIGQERMVNEADLSSLSYVQGIIFETLRLTPAAPLLVAHCPSEDCKIGGYDIPRDAIVLINAWAIHRDPELWEDATSFRPERHTNAIGVDSYKLLPFGLGRRACPGMGMAQRVVGLTLASLIQCFEWKRASSLLVDMTEGGGLTMPKAQPLVANMEMENLLLYLCVSLTTFILALIFLLRSPKNLPPSPPFSLPLIGHLYLIKRPVHRTLQSLSE | 543 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 8990337 | 9000034 | - | MC02g1071 | Mch2g1286 | 682208 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch2g1286 | 543 | PANTHER | CYTOCHROME P450 82C3-RELATED | 8 | 481 | IPR050651 | - | |
| Mch2g1286 | 543 | PRINTS | P450 superfamily signature | 296 | 313 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1286 | 543 | PRINTS | P450 superfamily signature | 423 | 432 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1286 | 543 | PRINTS | P450 superfamily signature | 432 | 443 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1286 | 543 | PRINTS | P450 superfamily signature | 349 | 360 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1286 | 543 | Pfam | Cytochrome P450 | 29 | 474 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1286 | 543 | FunFam | Cytochrome P450 family protein | 19 | 489 | - | - | |
| Mch2g1286 | 543 | Gene3D | Cytochrome P450 | 18 | 488 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1286 | 543 | SUPERFAMILY | Cytochrome P450 | 28 | 481 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1286 | 543 | PRINTS | E-class P450 group I signature | 56 | 75 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1286 | 543 | PRINTS | E-class P450 group I signature | 389 | 413 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1286 | 543 | PRINTS | E-class P450 group I signature | 422 | 432 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1286 | 543 | PRINTS | E-class P450 group I signature | 348 | 366 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1286 | 543 | PRINTS | E-class P450 group I signature | 175 | 193 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1286 | 543 | PRINTS | E-class P450 group I signature | 80 | 101 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1286 | 543 | PRINTS | E-class P450 group I signature | 305 | 331 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1286 | 543 | PRINTS | E-class P450 group I signature | 432 | 455 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1286 | 543 | PRINTS | E-class P450 group I signature | 285 | 302 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1286 | 543 | CDD | CYP81 | 60 | 479 | - | - | |
| Mch2g1286 | 543 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 425 | 434 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch2g1286 | Mch-Chr2:8990337 | Mch2g1289 | Mch-Chr2:9026838 | 7.91E-256 | dispersed | |
| Mch2g1285 | Mch-Chr2:8975229 | Mch2g1286 | Mch-Chr2:8990337 | 8.42E-234 | tandem | |
| Mch2g1286 | Mch-Chr2:8990337 | Mch2g1287 | Mch-Chr2:9010307 | 2.38E-220 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch2g1286 | K13260 | - | csv:101204413 | 705.671 |