Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g1287 GGTCTCTTTCTGATCTCTCTCCTGGCTGCTGTCAAATTTTTGCTGCAGCCAGGTCAAAACCAAAACCTCCCGCCGAGCCCACTTTTTTGTCTTCCCTTAATAGGCCACCTCCATCTCATCAAACCTCCACTCCACCGGAAACTTCACGAACTCTCGGAGAAGTATGGCCCCATCTTCTCTCTCCGGTTCGGCTCCCGTCTTGTTGTAGTTGTATCATCTCCTTCCACTGTACGTGAATGCTTCACGAAGAATGATATCGTTCTTGCCAATCGGCCGTTCTTGAACACTGGAAAGCACTTGGCCTATAACTTTACAATACTCGCTGTCGCCCCTTACGGCGAGCTTTGGCGCAACCTCCGCCGCATCAGCACCCACGAGATTTTCTCGGCGACACGCCTTAATCTGTTCTCGGGAATCAGACAAGACGAAGTCCAGCGGTTGCTGCGTGCGTTAAGCGGAAATTAGTTGGAAGAATTCTCGGTAGTGGAGCTTCAGCCGATGTTTATGGATCTTATGTCCAATATTGTCATGAGAATGGTTGCGGGAAAGAGGTATTATGGAGACGACGTGTTGGATAATGAAGGAAAAGCAGCTAGATTTAGAGATATTGTGAAGCTAGTTATGTTGCATGCTGGGGCAACGAATCCAGGAGATTTCATACCCATATGGAATTGGATTGATCCAACTAGTCTCGAGAAGAAGATAATGAAGATTGGATTGGAAGCTGATGCCATCTTTCAAGCTTTGATCGATGAGATTCGGAACCAAAAAGAAAGTGGAAATACCATGATTGATCATTTGCTTCACTTGCAGACCACTCAACCTGAATACTTCAGTGATCAAATCATCAAAGGTTTCATACAAGTTATATTATTAGCAGGTATTGATACAACAGCAGTGACGTTGGAGTGGGCTCTATCTCACTTGCTCAACAATCCGAATGTGATAAAGAAAGCAAGATTTGAGATAGAGTGTTGCACTGGAGAAGAACGATTGGTAAACGAGGACGACTTGTCGAGTTTGAGTTATCTGCAAGGAATAATCTTGGAGACTTTGCGGCTTACCCCAGCAGCTCTGATGCTTGTGCCACACTGCGCGTCTGAAAACTGCAAGATAGAAGAATATGATATACCACGTGATACGATCATATTTGTTAATGCTTGGACGATACATAGAGACCCAAGTCTATGGGAAGATGTCACTAGTTTTAAGCCTGAAAGGCATGAAAATACAACCGAAGCTGATTCATTCAAACTATTGCCATTCGGGTTCGGAAGGAGGGCATGTCCTGGTATGGGAATGGCACAATGCATAGTTGGCTTAACTTTAGCGTTGCTAATTCAATGTTTTGATTGA 1356 44.62 GLFLISLLAAVKFLLQPGQNQNLPPSPLFCLPLIGHLHLIKPPLHRKLHELSEKYGPIFSLRFGSRLVVVVSSPSTVRECFTKNDIVLANRPFLNTGKHLAYNFTILAVAPYGELWRNLRRISTHEIFSATRLNLFSGIRQDEVQRLLRALSGNLEEFSVVELQPMFMDLMSNIVMRMVAGKRYYGDDVLDNEGKAARFRDIVKLVMLHAGATNPGDFIPIWNWIDPTSLEKKIMKIGLEADAIFQALIDEIRNQKESGNTMIDHLLHLQTTQPEYFSDQIIKGFIQVILLAGIDTTAVTLEWALSHLLNNPNVIKKARFEIECCTGEERLVNEDDLSSLSYLQGIILETLRLTPAALMLVPHCASENCKIEEYDIPRDTIIFVNAWTIHRDPSLWEDVTSFKPERHENTTEADSFKLLPFGFGRRACPGMGMAQCIVGLTLALLIQCFD 450
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 9010307 9012008 + MC02g1072 Mch2g1287 682209
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch2g1287 450 PRINTS P450 superfamily signature 292 309 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1287 450 PRINTS P450 superfamily signature 345 356 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1287 450 PRINTS P450 superfamily signature 419 428 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1287 450 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 421 430 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Mch2g1287 450 SUPERFAMILY Cytochrome P450 24 450 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1287 450 PRINTS E-class P450 group I signature 428 450 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1287 450 PRINTS E-class P450 group I signature 281 298 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1287 450 PRINTS E-class P450 group I signature 76 97 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1287 450 PRINTS E-class P450 group I signature 344 362 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1287 450 PRINTS E-class P450 group I signature 301 327 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1287 450 PRINTS E-class P450 group I signature 385 409 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1287 450 PRINTS E-class P450 group I signature 418 428 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1287 450 PRINTS E-class P450 group I signature 52 71 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1287 450 PRINTS E-class P450 group I signature 170 188 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1287 450 PANTHER CYTOCHROME P450 82C3-RELATED 11 450 IPR050651 -
Mch2g1287 450 FunFam Cytochrome P450 82C4 16 450 - -
Mch2g1287 450 Gene3D Cytochrome P450 18 450 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1287 450 Pfam Cytochrome P450 25 450 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g1287 450 CDD CYP81 56 450 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g1287 Mch-Chr2:9010307 Mch1g1461 Mch-Chr1:16225325 1.03E-92 dispersed
Mch2g1287 Mch-Chr2:9010307 Mch2g1289 Mch-Chr2:9026838 5.26E-221 proximal
Mch2g1286 Mch-Chr2:8990337 Mch2g1287 Mch-Chr2:9010307 2.38E-220 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g1287 K13260 - csv:105434396 696.812