Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch2g1287 | GGTCTCTTTCTGATCTCTCTCCTGGCTGCTGTCAAATTTTTGCTGCAGCCAGGTCAAAACCAAAACCTCCCGCCGAGCCCACTTTTTTGTCTTCCCTTAATAGGCCACCTCCATCTCATCAAACCTCCACTCCACCGGAAACTTCACGAACTCTCGGAGAAGTATGGCCCCATCTTCTCTCTCCGGTTCGGCTCCCGTCTTGTTGTAGTTGTATCATCTCCTTCCACTGTACGTGAATGCTTCACGAAGAATGATATCGTTCTTGCCAATCGGCCGTTCTTGAACACTGGAAAGCACTTGGCCTATAACTTTACAATACTCGCTGTCGCCCCTTACGGCGAGCTTTGGCGCAACCTCCGCCGCATCAGCACCCACGAGATTTTCTCGGCGACACGCCTTAATCTGTTCTCGGGAATCAGACAAGACGAAGTCCAGCGGTTGCTGCGTGCGTTAAGCGGAAATTAGTTGGAAGAATTCTCGGTAGTGGAGCTTCAGCCGATGTTTATGGATCTTATGTCCAATATTGTCATGAGAATGGTTGCGGGAAAGAGGTATTATGGAGACGACGTGTTGGATAATGAAGGAAAAGCAGCTAGATTTAGAGATATTGTGAAGCTAGTTATGTTGCATGCTGGGGCAACGAATCCAGGAGATTTCATACCCATATGGAATTGGATTGATCCAACTAGTCTCGAGAAGAAGATAATGAAGATTGGATTGGAAGCTGATGCCATCTTTCAAGCTTTGATCGATGAGATTCGGAACCAAAAAGAAAGTGGAAATACCATGATTGATCATTTGCTTCACTTGCAGACCACTCAACCTGAATACTTCAGTGATCAAATCATCAAAGGTTTCATACAAGTTATATTATTAGCAGGTATTGATACAACAGCAGTGACGTTGGAGTGGGCTCTATCTCACTTGCTCAACAATCCGAATGTGATAAAGAAAGCAAGATTTGAGATAGAGTGTTGCACTGGAGAAGAACGATTGGTAAACGAGGACGACTTGTCGAGTTTGAGTTATCTGCAAGGAATAATCTTGGAGACTTTGCGGCTTACCCCAGCAGCTCTGATGCTTGTGCCACACTGCGCGTCTGAAAACTGCAAGATAGAAGAATATGATATACCACGTGATACGATCATATTTGTTAATGCTTGGACGATACATAGAGACCCAAGTCTATGGGAAGATGTCACTAGTTTTAAGCCTGAAAGGCATGAAAATACAACCGAAGCTGATTCATTCAAACTATTGCCATTCGGGTTCGGAAGGAGGGCATGTCCTGGTATGGGAATGGCACAATGCATAGTTGGCTTAACTTTAGCGTTGCTAATTCAATGTTTTGATTGA | 1356 | 44.62 | GLFLISLLAAVKFLLQPGQNQNLPPSPLFCLPLIGHLHLIKPPLHRKLHELSEKYGPIFSLRFGSRLVVVVSSPSTVRECFTKNDIVLANRPFLNTGKHLAYNFTILAVAPYGELWRNLRRISTHEIFSATRLNLFSGIRQDEVQRLLRALSGNLEEFSVVELQPMFMDLMSNIVMRMVAGKRYYGDDVLDNEGKAARFRDIVKLVMLHAGATNPGDFIPIWNWIDPTSLEKKIMKIGLEADAIFQALIDEIRNQKESGNTMIDHLLHLQTTQPEYFSDQIIKGFIQVILLAGIDTTAVTLEWALSHLLNNPNVIKKARFEIECCTGEERLVNEDDLSSLSYLQGIILETLRLTPAALMLVPHCASENCKIEEYDIPRDTIIFVNAWTIHRDPSLWEDVTSFKPERHENTTEADSFKLLPFGFGRRACPGMGMAQCIVGLTLALLIQCFD | 450 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 9010307 | 9012008 | + | MC02g1072 | Mch2g1287 | 682209 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch2g1287 | 450 | PRINTS | P450 superfamily signature | 292 | 309 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1287 | 450 | PRINTS | P450 superfamily signature | 345 | 356 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1287 | 450 | PRINTS | P450 superfamily signature | 419 | 428 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1287 | 450 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 421 | 430 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Mch2g1287 | 450 | SUPERFAMILY | Cytochrome P450 | 24 | 450 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1287 | 450 | PRINTS | E-class P450 group I signature | 428 | 450 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1287 | 450 | PRINTS | E-class P450 group I signature | 281 | 298 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1287 | 450 | PRINTS | E-class P450 group I signature | 76 | 97 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1287 | 450 | PRINTS | E-class P450 group I signature | 344 | 362 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1287 | 450 | PRINTS | E-class P450 group I signature | 301 | 327 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1287 | 450 | PRINTS | E-class P450 group I signature | 385 | 409 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1287 | 450 | PRINTS | E-class P450 group I signature | 418 | 428 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1287 | 450 | PRINTS | E-class P450 group I signature | 52 | 71 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1287 | 450 | PRINTS | E-class P450 group I signature | 170 | 188 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1287 | 450 | PANTHER | CYTOCHROME P450 82C3-RELATED | 11 | 450 | IPR050651 | - | |
| Mch2g1287 | 450 | FunFam | Cytochrome P450 82C4 | 16 | 450 | - | - | |
| Mch2g1287 | 450 | Gene3D | Cytochrome P450 | 18 | 450 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1287 | 450 | Pfam | Cytochrome P450 | 25 | 450 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1287 | 450 | CDD | CYP81 | 56 | 450 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch2g1287 | Mch-Chr2:9010307 | Mch1g1461 | Mch-Chr1:16225325 | 1.03E-92 | dispersed | |
| Mch2g1287 | Mch-Chr2:9010307 | Mch2g1289 | Mch-Chr2:9026838 | 5.26E-221 | proximal | |
| Mch2g1286 | Mch-Chr2:8990337 | Mch2g1287 | Mch-Chr2:9010307 | 2.38E-220 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch2g1287 | K13260 | - | csv:105434396 | 696.812 |