Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch2g1289 | CCAAGTACTGGAGTGACCATAGAAATGGAATTTCTTTTGCTTTCTATTCTCTCTTCTCTCTTCTCTCTTCTCATTGTCTTAAGCTTTCTACCGCGACCTCGTCGCGGGAACCTACCACCAAGCCCGCCTTTCGCTCTTCCATTGATAGGTCATATCCATCTCGTCAAACATCCCGTCCATCGAACGTTTCACAAAATCTCCAAAAAGTTCGGACCGATTTTCTCTCTTCGATTCGGTTCACGTCTCATTGTAGTTGTATCATCTTCTTCTGCCGTGCAAGAATGCTTTACAAAGAACGATATTGTTCTTGCAAATCGGCCAATAATGAAGAGTGGGAAGTACTTAGCATACAATTACACCACCTTGGGGTCCTCCCCTTACGGCGAACATTGGCGAAACCTCCGTCGAATCAGCGCCCTCGAGGTATTGTCGACAAGTCGTCTTAATTCTTTCGTGGGAATCCGAGAAGATGAGATTAAACGTTTGATGCATAGATTATGCGGCGATTCTTTGGAAGAGTTTGCAGTGGTGGAAGTGGAGCCATTGTTTTTAGATCTTACGTTTAGTATTGTCATGAGAATGTTGGCTGGGAAGAAGTATTATGGGGACGACATGTCGGAGGATTCGAGGCAATCGAGGAAGTTTAGGGAGGTGGTGACACAGATTCTAGCTCATGCTGTGTCGTGGAATCCAGGAGATTTCATTCCCATGTGGAACTTGATTGATCCAAGTGGTTTGGAGAAGAGGATAATGAAGCTTGGACAGAGAGCTGATGAACTCTTTCAAGGATTAATTGATGAGATTCGGAATCAGAACAATGGAGGAAACACCATGATTGACCATTTACTTGGCTTGCAAAACACACAGCCAGAATATTATAGTGATCAAGTTATCAAAGGCATTATTCAGATTCTATTATTAGCGGGAATCGACACGGCAGCTATAACGTTAGAATGGGCCCTATCTCAACTACTCAACAATCCTGAGGTGTTGAAGAAAGCAAGAGCTGAGATAGATCATTTTATTGGCGAAGATCGTCTGGTTAGCGAAGGTGATTTGTCGAGTTTGAGTTACTTGCAAGGGGTAATCACTGAGACCCTGCGATTGAACCCAGCAGCTCCTTTGCTCGTGCCACACTGCGCCTCTGAAGACTGCAAAATAGAAGGCTATGATATACCGCGTGATACTATTATATTGATCAATGCTTGGGCTATTCATAGAGACTCGAATATATGGGAAGATGCCACTAGTTTCAAGCCTGAAAGACATGCAAACACTATGGGAGGAGTTGATTCATACAAATTGTTACCATTTGGGCTGGGGAGGAGAGCCTGCCCAGGAATGGGAATGGCACAGCGTGTGGTTGGCTTGACTTTGGCATCATTGATTCAATGTTTTGAATGGGAAAGAGTGAACAGTTCATTGGTTGACATGACTGAAGGTGAAGGGCTCACTATGCCCAAAGCTCAACCATTAGTAGCCAAGTGTAAACCACGATTCATGTCGCTTTCGGACCAAGTCGATGATCAGGGCTTCGTCCTACCTCGCCTGAATGTGACTATGGATATTCTTTTTCTCTCTATTTCCCTCTCTCTATTCTCTCTTCTTCTTGCCTTTAGCTTTCTATTTCGATCTCGTCGCCAGAACCTCCCGCCGAGCCCACTTTTTTCTCTTCCAATAGTAGGCCATCTTCATCTCGTCAAACATCCCGTCCACCAAACATTTCATGAACTTTCACACAAGTATGGTCATGTCTTCTCTCTTCGATTCGGCTCACGTGTCGTTGTTGTTGTATCATCCCCTTCCGCCGTGCAAGAATGCTTTACAAAGAATGATATCGTTCTCGCAAATCGGCCATTGTTGAAGAGTGGCAAGCTTCTAGCATACAACCATACCACCATGGCAGTGGCCCCTTACGGCGAACATTGGCGAAACCTTCGCCGCATCGGCACCCTCGAGATTTTCTCGACAACCCGACTAAATATGTTCTTGGGAATTAGAGAAGATGAAGTAAGGAATTTGATGCTTAAATTATGTGAGAATTCATTTGAAGAATTCACGGCAGTGGAGCTGGAGCCAATGCTGTTCGATCTTACTTTCAATATTGTTATGAGAATGGTGGCTGGAAAGAAGTATTATGAGGAGCAACAATCTAAGAAATTTAGAGAGATGGTGACACAAGTTTTGGCACATGTTGGGGCAACAAATCCAGGAGATTTCATACCCATATGGAATTGGATTGATCCAACTGGCTTTGAGAAGAGGATAATTAAGCTTGGACAAAGATCAGATGAACTCCTTCAAGAACTAATTGATGAGATTCGAAATCAAGAAGGTGGAGACAACACCATGATTGACCATTTACTTTGCTTGCAGAAGAATGAGCCTGAATATTATAGTGACCAAATTATCAAAGGCCTGATACAAGTTATATTATTAGCGGGGATTGACACAGCCGCTGTGACTTTAGAATGGGCACTTTCTCGATTGCTCAACAATCCAGAGGTATTGGAGAAAGCGAAAGCTGAAATAGATTGTTTCGTTGGGCAAGAACGTCTGGTTAATGAAGCTGATCTGTCAAGTTTGATTTACCTGCAAGGAATAATCTGGGAGACTTTGCGGTTGAACCCAGCAGCTCCTCTCCTTATCCCGCACTGCGCATCTGCAGACTGCAAAATAGGAGGATATGATGTACCACGTGACACGATTATATTGATTAATATTTGGGCTATACACAGAGATCCAAATCTATGGGAGGATGCTACCAATTTTAAGCCAGAAAGACATGGAAATACAATTGGAGTTGACTCTTACAAACTATTACCATTTGGGTCGGGGAGGAGATCCTGTCCTGGCGTGGGAATGGCACAACGAGTGGTTGGTCTGACTTTGGCATCATTGATACAAGGCTTTGAATGGGAAAGAATGAGCAACTCATTAGTTGATATGACTGAAGGTAAAGGGCTCACTATGCCCAAAGCTCAACATTTGGTAGCCAAGTGTAAACCACGCCCAATCATGAAACTTATTCTCAATGAAGCAATAATCACTTAG | 3054 | 43.55 | PSTGVTIEMEFLLLSILSSLFSLLIVLSFLPRPRRGNLPPSPPFALPLIGHIHLVKHPVHRTFHKISKKFGPIFSLRFGSRLIVVVSSSSAVQECFTKNDIVLANRPIMKSGKYLAYNYTTLGSSPYGEHWRNLRRISALEVLSTSRLNSFVGIREDEIKRLMHRLCGDSLEEFAVVEVEPLFLDLTFSIVMRMLAGKKYYGDDMSEDSRQSRKFREVVTQILAHAVSWNPGDFIPMWNLIDPSGLEKRIMKLGQRADELFQGLIDEIRNQNNGGNTMIDHLLGLQNTQPEYYSDQVIKGIIQILLLAGIDTAAITLEWALSQLLNNPEVLKKARAEIDHFIGEDRLVSEGDLSSLSYLQGVITETLRLNPAAPLLVPHCASEDCKIEGYDIPRDTIILINAWAIHRDSNIWEDATSFKPERHANTMGGVDSYKLLPFGLGRRACPGMGMAQRVVGLTLASLIQCFEWERVNSSLVDMTEGEGLTMPKAQPLVAKCKPRFMSLSDQVDDQGFVLPRLNVTMDILFLSISLSLFSLLLAFSFLFRSRRQNLPPSPLFSLPIVGHLHLVKHPVHQTFHELSHKYGHVFSLRFGSRVVVVVSSPSAVQECFTKNDIVLANRPLLKSGKLLAYNHTTMAVAPYGEHWRNLRRIGTLEIFSTTRLNMFLGIREDEVRNLMLKLCENSFEEFTAVELEPMLFDLTFNIVMRMVAGKKYYEEQQSKKFREMVTQVLAHVGATNPGDFIPIWNWIDPTGFEKRIIKLGQRSDELLQELIDEIRNQEGGDNTMIDHLLCLQKNEPEYYSDQIIKGLIQVILLAGIDTAAVTLEWALSRLLNNPEVLEKAKAEIDCFVGQERLVNEADLSSLIYLQGIIWETLRLNPAAPLLIPHCASADCKIGGYDVPRDTIILINIWAIHRDPNLWEDATNFKPERHGNTIGVDSYKLLPFGSGRRSCPGVGMAQRVVGLTLASLIQGFEWERMSNSLVDMTEGKGLTMPKAQHLVAKCKPRPIMKLILNEAIIT | 1017 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 9026838 | 9051741 | + | MC02g1074 | Mch2g1289 | 682211 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch2g1289 | 1017 | FunFam | Cytochrome P450 family protein | 30 | 502 | - | - | |
| Mch2g1289 | 1017 | PANTHER | CYTOCHROME P450 82C3-RELATED | 536 | 1004 | IPR050651 | - | |
| Mch2g1289 | 1017 | SUPERFAMILY | Cytochrome P450 | 551 | 1004 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1289 | 1017 | Gene3D | Cytochrome P450 | 543 | 1006 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1289 | 1017 | Gene3D | Cytochrome P450 | 31 | 502 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1289 | 1017 | Pfam | Cytochrome P450 | 552 | 995 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1289 | 1017 | Pfam | Cytochrome P450 | 40 | 489 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1289 | 1017 | SUPERFAMILY | Cytochrome P450 | 39 | 499 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1289 | 1017 | CDD | CYP81 | 71 | 492 | - | - | |
| Mch2g1289 | 1017 | CDD | CYP81 | 583 | 997 | - | - | |
| Mch2g1289 | 1017 | PRINTS | E-class P450 group I signature | 317 | 343 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1289 | 1017 | PRINTS | E-class P450 group I signature | 866 | 884 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1289 | 1017 | PRINTS | E-class P450 group I signature | 67 | 86 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1289 | 1017 | PRINTS | E-class P450 group I signature | 940 | 950 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1289 | 1017 | PRINTS | E-class P450 group I signature | 186 | 204 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1289 | 1017 | PRINTS | E-class P450 group I signature | 297 | 314 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1289 | 1017 | PRINTS | E-class P450 group I signature | 907 | 931 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1289 | 1017 | PRINTS | E-class P450 group I signature | 950 | 973 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1289 | 1017 | PRINTS | E-class P450 group I signature | 91 | 112 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1289 | 1017 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 438 | 447 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Mch2g1289 | 1017 | PRINTS | P450 superfamily signature | 308 | 325 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1289 | 1017 | PRINTS | P450 superfamily signature | 361 | 372 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1289 | 1017 | PRINTS | P450 superfamily signature | 436 | 445 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1289 | 1017 | FunFam | Cytochrome P450 family protein | 542 | 1007 | - | - | |
| Mch2g1289 | 1017 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 943 | 952 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch11g0338 | Mch-Chr11:2084976 | Mch2g1289 | Mch-Chr2:9026838 | 0 | dispersed | |
| Mch1g1246 | Mch-Chr1:14737877 | Mch2g1289 | Mch-Chr2:9026838 | 3.58E-181 | dispersed | |
| Mch2g1283 | Mch-Chr2:8947323 | Mch2g1289 | Mch-Chr2:9026838 | 8.63E-201 | dispersed | |
| Mch2g1285 | Mch-Chr2:8975229 | Mch2g1289 | Mch-Chr2:9026838 | 6.78E-193 | dispersed | |
| Mch2g1286 | Mch-Chr2:8990337 | Mch2g1289 | Mch-Chr2:9026838 | 7.91E-256 | dispersed | |
| Mch2g1289 | Mch-Chr2:9026838 | Mch5g1415 | Mch-Chr5:15234172 | 4.62E-161 | dispersed | |
| Mch2g1287 | Mch-Chr2:9010307 | Mch2g1289 | Mch-Chr2:9026838 | 5.26E-221 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch2g1289 | K13260 | - | csv:101215922 | 1107.05 |