Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g1334 ATGGAACGAAGATTTCTACTCCTCTGCCTTCTCTTCGCCGCTCTTCCGATCTCACTCGCGCAACTCCGGCGAGATTTCTACGCCGATGTCTGCCCTAACGTCGAGAGCATCGTCCGGACCGCCGTGACGAAGAAGTTCCGGCAGACTTTCGTTACGGTTCCGGCCACGCTCCGCCTCTTCTTCCACGACTGTTTTGTTCAGGGATGCGATGCGTCGGTGATGATTTCTTCGAGTGGAGGCAATACGGCGGAGAAGGATCATCCTGATAATCTGTCGCTGGCCGGAGATGGATTCGATACGGTGATCAAAGCCAAGGCGGCGGTCGACGCCGTGCCGGGATGTAGAAATAAAGTCTCCTGCGCCGATATTCTCGTCATGGCTACTCGAGACGTCATTTCCTTGGCTCGTGGACCTTCATATTCTGTGGAGCTGGGGAGAAAGGATGGGCTTGTTTCGAGAGCTTCTGATGTTAATGGGAAACTGCCTCAGCCAAGTTTCAATCTCAATCAGCTCAACGCCATGTTTGCTGCCAATGGCCTTTCCCAAGCCGACATGATCGCTCTCTCTGCTGCGCACACCGTTGGATTCTCCCACTGCAGCAAGTTCGCGAACCGAATCTACAATTTCAGCCGTACAAATCCGGTGGATCCAACTCTGGACAAGGCCTACGCAACGAAGCTTCAAGGGATGTGCCCCAAGGACGTGGATCCAAGGATAGCCATAGACATGGATCCAAACACCCCCCAAAGATTCGACAACGTGTACTTCAAGAATCTCCAGCAAGGAATGGGCCTCTTCACTTCGGACCAAGTTCTGTTCACGGACCCAAGGTCCAGGCCCACTGTCAAGGTTTGGGCCCACAGTGGCCAGACCTTCTACAAGGCCTTCATTGACGCCATGACCAAGCTGGGCCGGGTCGGAGTCAAAACCGGATCCGACGGCAATATTCGCACCGACTGCGGTGTATTTAACAGTTGA 978 53.99 MERRFLLLCLLFAALPISLAQLRRDFYADVCPNVESIVRTAVTKKFRQTFVTVPATLRLFFHDCFVQGCDASVMISSSGGNTAEKDHPDNLSLAGDGFDTVIKAKAAVDAVPGCRNKVSCADILVMATRDVISLARGPSYSVELGRKDGLVSRASDVNGKLPQPSFNLNQLNAMFAANGLSQADMIALSAAHTVGFSHCSKFANRIYNFSRTNPVDPTLDKAYATKLQGMCPKDVDPRIAIDMDPNTPQRFDNVYFKNLQQGMGLFTSDQVLFTDPRSRPTVKVWAHSGQTFYKAFIDAMTKLGRVGVKTGSDGNIRTDCGVFNS 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9447582 9450562 + MC02g1108 Mch2g1334 682256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g1334 325 ProSitePatterns Peroxidases active site signature. 53 64 IPR019794 GO:0004601(InterPro)
Mch2g1334 325 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g1334 325 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g1334 325 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g1334 325 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g1334 325 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g1334 325 PANTHER - 7 324 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g1334 325 SUPERFAMILY Heme-dependent peroxidases 21 324 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g1334 325 FunFam Peroxidase 25 173 - -
Mch2g1334 325 FunFam Peroxidase 162 303 - -
Mch2g1334 325 Gene3D Peroxidase, domain 2 162 303 - -
Mch2g1334 325 CDD secretory_peroxidase 21 323 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Mch2g1334 325 ProSiteProfiles Plant heme peroxidase family profile. 21 324 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g1334 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Mch2g1334 325 Gene3D - 25 324 - -
Mch2g1334 325 Pfam Peroxidase 38 287 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g1334 325 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g1334 325 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g1334 325 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g1334 325 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g1334 325 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g1334 325 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g1334 325 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g1334 325 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g1334 325 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0625 Mch-Chr11:4018474 Mch2g1334 Mch-Chr2:9447582 1.65E-141 dispersed
Mch2g1334 Mch-Chr2:9447582 Mch4g2597 Mch-Chr4:26306352 4.02E-116 dispersed
Mch2g1334 Mch-Chr2:9447582 Mch1g1272 Mch-Chr1:14928910 3.26E-180 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g1334 K00430 - csv:101208254 580.482