Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g1335 ATGAGAGCTCATCGTTTGAGCTTCATCACCTTCTTCATTTTGTTTCTTTCATTGTTCGATACACTCACCATCCGCGGCTTGCCGGTTCTCCACGATTCCGCCATTGTTTCCAGAAGGATTCTGCATCAGCCGTTCTTTCCTTCCGAGCCACCGCCGGTGACTGACTTTCCACCGCCGCCACCGCCGCCGTACTCTCCCTCGGACGACCAGCCTTTTTTCCATGAGTCCCCTCCGAGTCCAGATCAGAGTAGTCAACCGCCTCCTTCCGGGAGTAATGGAACTATGCCAATCCCGGCCGCTACGCAACCGTCCAAGCCGACGAAGACCGTCGCGATTGCGATTTCGGTTGGGATTGTGACTTTGGGGATGCTCTCTGCTCTGGCGTTCTTTCTGTATCGTCACCGCGCGAAGCATCCCGGCGAATCGCAGAAGCTTGTTGGGGGAAATAATCCGGAGAGATTTGCCGAGGACTCCAGAGCGCCGCCGTCGAGTTTCTTCTACATCGGAACTGTTGAGCCGAGCCAGAGCTCTCTCGTTGAGCAGAGTGGTGCTAATGGTGCTAATAGTTCGCCTTATCGCAAGCTGAATTCGATCAAGAGGTCGGATCGGTACCGTCCGAGTCCGGAATTGCAGCCGCTGCCGCCTCTACCGAAGCCGCCGGCTGTCATGTCGCCTCCTGCTCTGTCGTCTTCCGATGAGGAAAGCCATGATACGGCATTCCATACTCCGCAATGCTCGTCGGTGGTCAGTAACGATGATGGCTATTTCTCACCGGGTTCTCGTCGGAGTAATTCAGTTCAGAGCTGTTCGACGGCAAGCTTTAAGAATGTCCATATGAATTCGAATTCTAATCCTCCTCCTATTCCTCATTCTAAAAGAACTTCTCCTAAATCGAGATTTTCAGTTTCTTCGACGAAGCGCACTTCATCTCAGCCACCGCCGCCGCCGCCTCCACCACCGTATCCGATTGATGACCTTCGTGATACTCCGAATTCGAAAGAAACAATGCCTTTTTCGTCCACGAGACCTAAATTCTCCAAGCCTCCGCCTCCGCCGAATTTGGCACTTCTTCAAACAATTAGCAGTTCAGCCACATTTCCTCAAGTTCCGAAACCTGCTGCACCTCCACCTCCACCTCCGCCTCCGCCTCCACCGCCCCCACCGCCGCCGCCCCCTGTGCGTCCGGCTTCTTATTCCACTCCACAAAAACTAGGGTTATCAGAAACGAGAGTGTCTGCAGTGACTACGCCGGACTCATCTAAATCGCAGTCCTACTCGGCAGCGAGATCAAATCCATCTTCCACTCCGAGTTCTGGGACATCAAAGTCTGTTCAAGAAGATGTCTACCAGAGGATTAATTCTATGGAGAGGCTTGAAGCAGAGGATACAGAGGGTGCAAAACCGAGATTGAAGCCCTTGCACTGGGACAAAGTACGGGCAACCTCAGACCGAGCGACAGTCTGGGATCAACTTAAATCAAGCTCATTCCAATTAAACGAGGACATGATGGAGACACTTTTCGGTTTCAATTCTGCGAATTCTGTTCCCAAGGAGGTCACGAGAAAGTCTGTTCTCCCCCCCGTTGAGAAGGAAAATAGGGTGTTGGATCCGAAAAAGTCGCAGAACATAGCAATACTCCTAAGAGCACTTAATGTCACGCGTGATGAGGTGATCGAAGCTCTTCAAGATGGTAACCCGGAAGGCTTTGGCACTGAGCTTTTAGAAACTCTAGTAAAGATGGCTCCAACCAAAGAGGAAGAAATAAAACTCAGAGAGTACTGTGGTGATGTTTCAAAACTAGGGACTGCAGAAAGATTTCTCAAGGCAGTGCTTGAAGTCCCATTTGCCTTTAGAAGAGTTGAAGCCATGCTGTACAGAGCCAATTTTGATTCAGAAGTAAAGTACCTGAGAAAGTCTTTCCAAACCCTTGAGGGTGCAAGTGAAGAATTAAAGAACAGTAGACTTTTTCTTAAACTACTTGAAGCAGTTCTTAAGACGGGAAATAGGATGAATGTCGGTACGAATCGTGGTGATGCTAAAGCCTTTAAGCTTGAAACCCTCTTAAAATTAGTAGATATAAAGGGAACAGATGGGAAAACAACATTACTTCATTTTGTTGTCCAAGAAATTATCAGATCAGAAGGTGGTGCTGATACAACTAATGACAACCTTCAACACCGAACGCAATCCAAAATCGAGGATGAGTTTAGAAAGCAGGGCTTGCAGGTTGTGGCTGGACTAAGCAGAGACCTTAGCAATGTCAAAAAAGCGGCCGGTATGGACTCAGACGTCTTGAGCAGTTATGTCACGAAGCTCGAAATGGGGCTCGAAAAAGTAAGGTCAGTTTTGCAATTCGAAAAGCCAGGAATTCAGGGAAGATTCTTCCACTCGATGAAAACATTCTTGAAAGAGGCAGAAGAAGAAATAGTTAGGATCAAGGCCGACGAAAGGAAAGCTTTATCGCTTGTGAAAGCAGCCACAGAGTATTTCCACGGCGATGCTGCCAAGGAGGAAGCTCATCCCTTCCGAATCTTCATGATCGTTAGGGATTTCCTAACCATACTGGATCAAGTATGCAAAGAAGTCGGAAGGATGCAGGATGGAGTAATGGTGGGCGCTGCTAGATCGTTTCGGATATCAGCAACAGCCTCACTCCCAGTCCTGAGCAGGTACAACATCAGACACGACCAAAGCTCCGATGAGGATAGCTCATCTCCATGA 2721 48.99 MRAHRLSFITFFILFLSLFDTLTIRGLPVLHDSAIVSRRILHQPFFPSEPPPVTDFPPPPPPPYSPSDDQPFFHESPPSPDQSSQPPPSGSNGTMPIPAATQPSKPTKTVAIAISVGIVTLGMLSALAFFLYRHRAKHPGESQKLVGGNNPERFAEDSRAPPSSFFYIGTVEPSQSSLVEQSGANGANSSPYRKLNSIKRSDRYRPSPELQPLPPLPKPPAVMSPPALSSSDEESHDTAFHTPQCSSVVSNDDGYFSPGSRRSNSVQSCSTASFKNVHMNSNSNPPPIPHSKRTSPKSRFSVSSTKRTSSQPPPPPPPPPYPIDDLRDTPNSKETMPFSSTRPKFSKPPPPPNLALLQTISSSATFPQVPKPAAPPPPPPPPPPPPPPPPPPVRPASYSTPQKLGLSETRVSAVTTPDSSKSQSYSAARSNPSSTPSSGTSKSVQEDVYQRINSMERLEAEDTEGAKPRLKPLHWDKVRATSDRATVWDQLKSSSFQLNEDMMETLFGFNSANSVPKEVTRKSVLPPVEKENRVLDPKKSQNIAILLRALNVTRDEVIEALQDGNPEGFGTELLETLVKMAPTKEEEIKLREYCGDVSKLGTAERFLKAVLEVPFAFRRVEAMLYRANFDSEVKYLRKSFQTLEGASEELKNSRLFLKLLEAVLKTGNRMNVGTNRGDAKAFKLETLLKLVDIKGTDGKTTLLHFVVQEIIRSEGGADTTNDNLQHRTQSKIEDEFRKQGLQVVAGLSRDLSNVKKAAGMDSDVLSSYVTKLEMGLEKVRSVLQFEKPGIQGRFFHSMKTFLKEAEEEIVRIKADERKALSLVKAATEYFHGDAAKEEAHPFRIFMIVRDFLTILDQVCKEVGRMQDGVMVGAARSFRISATASLPVLSRYNIRHDQSSDEDSSSP 906
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9454495 9459316 - MC02g1109 Mch2g1335 682257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g1335 906 Coils Coil 802 822 - -
Mch2g1335 906 MobiDBLite consensus disorder prediction 86 104 - -
Mch2g1335 906 MobiDBLite consensus disorder prediction 47 68 - -
Mch2g1335 906 MobiDBLite consensus disorder prediction 208 224 - -
Mch2g1335 906 MobiDBLite consensus disorder prediction 240 308 - -
Mch2g1335 906 MobiDBLite consensus disorder prediction 309 325 - -
Mch2g1335 906 SMART it6_source 460 870 IPR015425 -
Mch2g1335 906 Pfam Formin Homology 2 Domain 463 855 IPR015425 -
Mch2g1335 906 SUPERFAMILY Formin homology 2 domain (FH2 domain) 381 866 - -
Mch2g1335 906 MobiDBLite consensus disorder prediction 140 446 - -
Mch2g1335 906 MobiDBLite consensus disorder prediction 400 446 - -
Mch2g1335 906 Gene3D Formin, FH2 domain 453 866 IPR042201 -
Mch2g1335 906 ProSiteProfiles Formin homology-2 (FH2) domain profile. 460 881 IPR015425 -
Mch2g1335 906 PANTHER FORMIN-RELATED 14 900 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Mch2g1335 906 MobiDBLite consensus disorder prediction 47 104 - -
Mch2g1335 906 MobiDBLite consensus disorder prediction 369 397 - -
Mch2g1335 906 MobiDBLite consensus disorder prediction 168 195 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g1148 Mch-Chr11:8056654 Mch2g1335 Mch-Chr2:9454495 4.01E-112 dispersed
Mch1g1281 Mch-Chr1:15006196 Mch2g1335 Mch-Chr2:9454495 9.02E-28 dispersed
Mch2g1335 Mch-Chr2:9454495 Mch6g2239 Mch-Chr6:24610220 6.22E-163 dispersed
Mch2g1335 Mch-Chr2:9454495 Mch2g0617 Mch-Chr2:4239331 1.41E-113 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g1335 K28090 - csv:101208011 1335.86