Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g1445 ATGGCTTCTTCAAACCCCATCTCCCTCCTCACATTTTTCATTCTCTTCTTCTTCCTACTCTCCTCTCCATCTCACTCCACCGCCCCGGTTACGACGGTGGAGATCTGTCAATCCGCTACCTCTCCCTCTTTCTGCAGGTCCTTCCTCCCCGCCTCCCTGGCCTCCGTCCACTCCCATTGTCGCTTCACCCTTGCCCACGCCCTTGCCCGCGCTCACGCCTTCCTCGGCCTCGTTGATGCCCATCTCGGACTCGCCCCTACTCTCCCCACCCGCATTGTCTCTGCCCTCCACGACTGCCACTCCCTCGCCGCCGCCAACGTTGAGTTCATATCCAGCACCCTCGATACCGTCAACAACACCACCCAGCTCCTCCCCTTTTATGAGGCCGATGAGTTGCTAAGCTTCATAAGTGCCCTCATTACCAATGGAGATACTTGTTACGAAGGCCTGACCGTCGCGGCCGCCACCACGACATCGTCGGTGGTGGGTTCGGTCGAGAAGGTGTTGGCGGCGCTGTCGTATGACAAAAATGTCTACAGCTTGTACCTTTCTTTGTTCAAAATGGGGTGGGTGCCGGAGAACATGAAGGCTCCGGGGTTGCCGGAGGGGAAACATTTCCGGCTCCGGCGTGGGCCGTTGAACCTCAAAATGTCGCCGGAAAACCGTGCGTATTATGACCGGCTGGTGCATAGGAAGAGGCCGGCGGCCCCCGGTAGAAGACTTCTTCAGACAAATTATGAAGCTGAAGGAATTCTTGTTAATGGTATTGTTGCGGTGGATAAAAATGGTAGCTACGACTACACCACCATCAACGCTGCCATTGCAGCAGCTCCGAACAACTCGGCCGCTGGCAACGGTTACTTCTTGATCTTCGTTAGCAGTGGCGTGTACAACGAGAGCGTTGTGGTTCCAAAGAACAAAAAGTACGTGTTGATGATCGGAGAAGGTAACAACCAAACTATCATTACGGGCAACAACAATGTCGTCGACGGTTCCACCACCTTCAACAGCGCTACCGTCGTTGTGGAGGGAACAGGGTTCTTTGGGGTGAACCTAACGATCACCAACACGGCTGGTGCCATCAAACACCAAGCCGTGGCCCTACGAGTCAGCGCAGATTTGACGACGTTTTACAGTTGCATATTCGAAGGCTACCAAGACACTCTCTACGCCCACACCCTTCGTCAATTCTACCGTGAATGCGATGTCTACGGCACTGTCGATTTCATCTTCGGTAACGCTGCCGTCGTTATCCAGAACTGCAATCTTTACACCCGGCTCCCGCTGAGCGGTCAGTTCAACGCCCTCACAGCACAGGGTCGGACCGACCCGAACCAGAACACCGGCACCTCGATCCACAACTGCACGATCAAGCCGACGGCGGAGCTCGCCGCCAGCCCCGCCACCAAGAGCTACTTGGGGCGGCCGTGGAAGGAATATTCTCGAACAGTTTACATGCAGTCGTTTATAGATGCTTTTATTGACCCTGCAGGATGGAAGGAGTGGGACGGGACGTTGAATTTGAACACGTCGTATTACGCGGAGTTTAGCAACTCCGGGCCGGGATCCGACACCTCACGGCGGGTGAAATGGGCGGTCGGCGTCATCAACGCCACCGTGGCTAGTAACTTCACGGTGTCCAGTTTGTTGGCCGGAGATCAGTGGTTGCCGCCGACCACAGTTCCGTACACCGGCGGTTTGATATCA 1707 55.48 MASSNPISLLTFFILFFFLLSSPSHSTAPVTTVEICQSATSPSFCRSFLPASLASVHSHCRFTLAHALARAHAFLGLVDAHLGLAPTLPTRIVSALHDCHSLAAANVEFISSTLDTVNNTTQLLPFYEADELLSFISALITNGDTCYEGLTVAAATTTSSVVGSVEKVLAALSYDKNVYSLYLSLFKMGWVPENMKAPGLPEGKHFRLRRGPLNLKMSPENRAYYDRLVHRKRPAAPGRRLLQTNYEAEGILVNGIVAVDKNGSYDYTTINAAIAAAPNNSAAGNGYFLIFVSSGVYNESVVVPKNKKYVLMIGEGNNQTIITGNNNVVDGSTTFNSATVVVEGTGFFGVNLTITNTAGAIKHQAVALRVSADLTTFYSCIFEGYQDTLYAHTLRQFYRECDVYGTVDFIFGNAAVVIQNCNLYTRLPLSGQFNALTAQGRTDPNQNTGTSIHNCTIKPTAELAASPATKSYLGRPWKEYSRTVYMQSFIDAFIDPAGWKEWDGTLNLNTSYYAEFSNSGPGSDTSRRVKWAVGVINATVASNFTVSSLLAGDQWLPPTTVPYTGGLIS 569
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 10680067 10682942 - MC02g1199 Mch2g1445 682367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g1445 569 PANTHER PECTINESTERASE 13 558 - GO:0030599(PANTHER)|GO:0046910(PANTHER)
Mch2g1445 569 FunFam Pectinesterase 252 567 - -
Mch2g1445 569 SUPERFAMILY Pectin lyase-like 253 566 IPR011050 -
Mch2g1445 569 CDD PMEI-like_3 35 190 - -
Mch2g1445 569 ProSitePatterns Pectinesterase signature 2. 403 412 IPR033131 -
Mch2g1445 569 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 185 IPR035513 -
Mch2g1445 569 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 185 IPR035513 -
Mch2g1445 569 Gene3D - 256 569 IPR012334 -
Mch2g1445 569 Pfam Pectinesterase 257 553 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Mch2g1445 569 Pfam Plant invertase/pectin methylesterase inhibitor 34 163 IPR006501 GO:0004857(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0703 Mch-Chr11:4630313 Mch2g1445 Mch-Chr2:10680067 5.12E-192 dispersed
Mch2g1445 Mch-Chr2:10680067 Mch9g1889 Mch-Chr9:20525372 1.08E-142 dispersed
Mch2g1445 Mch-Chr2:10680067 Mch9g0696 Mch-Chr9:5226477 8.92E-188 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g1445 K01051 - csv:101216984 791.956