Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g1464 ATGGCTTCCAAATCCCAAGTGCTGCTGAACCCACAAGTTTTGTTTGAAGATGAAGAAGCAGATCAAAATTCTTCTCAAATGGGTTTCTTCAGCACTTTCTTGCCTTCTTCAAACTTGACGTTTGTGCAGGTTCCTTCAATGGCGGCCATGAACAACAGCTCTCCTAATTCGCCGCCATTTGAGGCTCCTAATTTCTGCACTGCTGAAACCCTTCTTTCTTCTTCTTCTCTTTTGCCAGCTCCCAAGCAGAGAGATCACCACTGCCCCTCCTCTCAGTTTGTGGCTCACCATCTCCTCTCCTTGCAAACATCTAATGCAAATCTATGGCCCTGGGGGGAGGTTGGAGAGAGCTTGATGAGTGGGAAGAGAGTGAATGGGGGAAATGGGAATGAGTATCACCATCATCATCACTTGGGAGTGAGTGCAATGAAGATGAAGAAGATGAAAGGGAGGAGAAAGGTGAGAGAGCCAAGGTTTTCCTTCAAGACAATGAGCGATGTGGATGTTCTTGATGATGGTTACAAATGGCGCAAGTACGGCCAGAAAGTGGTCAAAAACACACACCATCCCAGAAGCTACTATCGTTGTACGCAAGATCACTGTCGAGTAAAGAAACGAGTAGAGAGATTGGCTGAGGATCCAAGAATGGTGATAACAACTTATGAAGGAAGACATGTACATTCTCCCTCCCATGATTCTGAAGACTCAGAAGCTCAAACTCATCTCAACAATTTCTTCTGGTAA 744 45.43 MASKSQVLLNPQVLFEDEEADQNSSQMGFFSTFLPSSNLTFVQVPSMAAMNNSSPNSPPFEAPNFCTAETLLSSSSLLPAPKQRDHHCPSSQFVAHHLLSLQTSNANLWPWGEVGESLMSGKRVNGGNGNEYHHHHHLGVSAMKMKKMKGRRKVREPRFSFKTMSDVDVLDDGYKWRKYGQKVVKNTHHPRSYYRCTQDHCRVKKRVERLAEDPRMVITTYEGRHVHSPSHDSEDSEAQTHLNNFFW 247
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 10872866 10876379 - MC02g1212 Mch2g1464 682386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g1464 247 SUPERFAMILY WRKY DNA-binding domain 162 229 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Mch2g1464 247 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 135 233 IPR044810 GO:0003700(InterPro)
Mch2g1464 247 SMART WRKY_cls 170 229 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Mch2g1464 247 ProSiteProfiles WRKY domain profile. 165 230 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Mch2g1464 247 Pfam WRKY DNA -binding domain 171 227 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Mch2g1464 247 Gene3D WRKY domain 157 223 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Mch2g1464 247 FunFam WRKY transcription factor 57 156 230 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g1067 Mch-Chr1:13626732 Mch2g1464 Mch-Chr2:10872866 1.41E-57 dispersed
Mch2g1464 Mch-Chr2:10872866 Mch5g0008 Mch-Chr5:68392 1.99E-45 dispersed
Mch2g1464 Mch-Chr2:10872866 Mch1g1999 Mch-Chr1:19577315 3.87E-32 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
42966 PF03106 WRKY 1.10E-23 CL0274 Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g1464 - - - 0.0