Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g1486 ATGTTGTCTGTGAAAACAGAGCTATTTCTTGTGGCTTTCTTCTACCTTGGAGTTCATGCAATCTTCTCCTTTACACACCCAAACGATGTTCAAATCCTCCTATCGTTGAAAGAGCAATGGCAAAATACTCCACCTTCATGGGGATCATCGGGCGATCCATGTGGAGATCACTGGGGTGGAGATCACTGGGATGGAATCACTTGCAACGATTCAAGAGTCACTGAGCTAAAATTAGCATCAATGGGGCTTATAGGCCAACTCAGTGGCGACATTGGAGGCCTCACTAATCTAGTAGCATTGGACCTTTCTTTTAATAGAGATCTCACTGGTCCACTCTCTGCTAGGTTGGGGGATTTGCGAAATTTGAACTTCTTAATCCTAGCTGAATGTGGCTTCACTGGTCAAATTCCAGAAGAATTGGGCAATCTTACTGAGTTGCAGTCCTTGGCTTTGAATTCAAACAAACTCATTGGTCCTATACCTCGTACTCTGGGAAAACTCTCCAAACTTTATTTGCTAGACTTGATAGACAATCAGTTGGATGGGCCTCTCCCTGTTTCAACTTATGATTCACCAGGTCTGGACCGTCTTCTCAAAGCTAGGCATTTTCACTTGAGCAAGAACAGGCTATCAGGTTCTATACCAACCAATCTTTTTAACTCTGATATGAAATTAATACACATAGTATTGGATGGGAACCAGTTTTCTGGGACTATTCCACAGACCTTAGGACTTGTTAAGACTCTTGAAGTTCTCCGACTTGATAGGAATTCTCTAACAGGAAATTTCCCATCAAATCTTAGCAACTTAAGACAACTCACTCAATTGAATTTGGCACACAATAATCTGACAGGTCCATTCCCAAATTTAATTCAAATGACTTCACTGTGTGTTGTGGACCTTAGTAACAACTCATTTGACTCATCAACAGCCCCAGGTTGGTTCTCAAGCTTACCTACTCTTACCACTTTAATCATTGAGTATGGGTCAATACAAGGATCTGTGCCGGAAACAATCTTTAGCTTACCACAGATACAACAAATAAAACTGAAGTACAATTTATTTGGTGGGACATTGAGCTTTGGTGGCAATGTCAACCAGAAGCTGAAGCTTGTTGATTTGGAAAATAATCATATTTCCCGACTTGCATTGTCTGGATATAACAAAACCTTGATGCTTAAAGGAAATCCTGTGTGTGATGTTGATCCTCTCTTAAAAGAAAATGATTGCCAACTTGAACTGCAAGCTCCAGGGCCTAATTCTACCGATTCTATCAACTGCTTATGCCCCACTGGTCAGAAGAGTAACCCTCAAAGTCAAAGCTGTGAATGTCAATATCCATTTGAAGGGTTTTTGTACTTCAGAGGGCCCTTGATAAGAGAATTGTCTAATAGGACTCTGTTTCGGTTACTGCAACAGAACCTTGCGGAGAAACTACAGCTTCCTTCTGCTTCAGTTTCTATTCAAGCTCCTTTGTTTAATAGTGATGATTACCTTAAGATGCAAGTCGACCTTTTTCCACCCTCTGGAAAGTGTTTCAACCGGTCAGAAATTCTGGGGATTGCGTCTACATTGAGTCATCAAACTTTCGATCTTTCTAAAGTGTTAGGATCCTTTTATTTCTCTCTAAATCCTTACAACTTTTCAGATGTGGGAACTTCTAGTCGCAATTGGTGGCTGATTGGCATTGCAGTTGGTTGTGCCTTACTGGTCCTAAGCCTCATTGGAGTTGGTATATATGCAGTAAAGCAGAAGAAACGAGTATCAAGAGCCGTTGCATTGAGTAAGCCATTTGCTTCCTGGTCCTCGATTGAACAAGATAGTGGAGACGCACCACAATTAAAGGGAGCAATATATTTTTCTTATGGTGAGCTTATAAAGTTGACAAATAATTTCTCTGCAAGGCATGAGATAGGAGTTGGAGGATATGGAAAGGTTTATAGAGGAATGGCTGGGGATGGACAAGTATTTGCAATCAAAAGAGCCAAGCAAGGATCGAAGCAGGGTGGACTTGAGTTCAAGACGGAGATTGAATTGCTTTCACGAGTTCATCACAAGAATCTAGTCGGCCTTCTAGGATTTTGTTGTGAACAAGGAGAACAGATGCTTGTTTATGAATTCATGCCTAATGGATCACTTCGACAGAGCCTTTCTGGGATTTCTGGTATCCATCTTGATTGGAATAGAAGATTACAGATAGCACTTGACTCTGCAAGAGGACTAACTTACCTTCACGAGTTTGCAAATCCTCCTATAATCCATAGAGATATCAAGTCCTGCAATATTCTGTTGGATGAATATTTGAATGGGAAGGTTGCTGATTTTGGCTTGTCCAAGCTTGTATTCGACCATGAAAAGGGACATTCTTCTAGCGTGGTTAAAGGCACTTGGGGCTATATCGATCCAGAATATTACACGACGCAAAAATTAACCGAGAAGAGCGATGTGTACAGCTTTGGTGTTGTTATGCTCGAATTAATTACTTCTAAGCAGGCAATCAAGAAAGGGAAGTACTTAGTTCACGAAGTGCTTGTGCTCATGAATAAGAATGACAAAGAACATTATGGATTGGCGAATATAATCGACGCAACCATCAGAAACGAGATGACAAGTCTCAGTGGATTTGGAAGGTTCCTGGAGTTGGCCATACAATGTATCGAACAATCGTCTGCAAATCGACCTGTGATGAGCGAAGTGGTTAAGGAAATCGAAAGCATTTTACAAAGCATATCTTCACAGCCAGACAGTTTGGAGTTTGCAAAGGCACCCCAAGCATTCTAA 2781 41.14 MLSVKTELFLVAFFYLGVHAIFSFTHPNDVQILLSLKEQWQNTPPSWGSSGDPCGDHWGGDHWDGITCNDSRVTELKLASMGLIGQLSGDIGGLTNLVALDLSFNRDLTGPLSARLGDLRNLNFLILAECGFTGQIPEELGNLTELQSLALNSNKLIGPIPRTLGKLSKLYLLDLIDNQLDGPLPVSTYDSPGLDRLLKARHFHLSKNRLSGSIPTNLFNSDMKLIHIVLDGNQFSGTIPQTLGLVKTLEVLRLDRNSLTGNFPSNLSNLRQLTQLNLAHNNLTGPFPNLIQMTSLCVVDLSNNSFDSSTAPGWFSSLPTLTTLIIEYGSIQGSVPETIFSLPQIQQIKLKYNLFGGTLSFGGNVNQKLKLVDLENNHISRLALSGYNKTLMLKGNPVCDVDPLLKENDCQLELQAPGPNSTDSINCLCPTGQKSNPQSQSCECQYPFEGFLYFRGPLIRELSNRTLFRLLQQNLAEKLQLPSASVSIQAPLFNSDDYLKMQVDLFPPSGKCFNRSEILGIASTLSHQTFDLSKVLGSFYFSLNPYNFSDVGTSSRNWWLIGIAVGCALLVLSLIGVGIYAVKQKKRVSRAVALSKPFASWSSIEQDSGDAPQLKGAIYFSYGELIKLTNNFSARHEIGVGGYGKVYRGMAGDGQVFAIKRAKQGSKQGGLEFKTEIELLSRVHHKNLVGLLGFCCEQGEQMLVYEFMPNGSLRQSLSGISGIHLDWNRRLQIALDSARGLTYLHEFANPPIIHRDIKSCNILLDEYLNGKVADFGLSKLVFDHEKGHSSSVVKGTWGYIDPEYYTTQKLTEKSDVYSFGVVMLELITSKQAIKKGKYLVHEVLVLMNKNDKEHYGLANIIDATIRNEMTSLSGFGRFLELAIQCIEQSSANRPVMSEVVKEIESILQSISSQPDSLEFAKAPQAF 926
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 11215015 11229845 - MC02g1231 Mch2g1486 682408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g1486 926 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 708 918 - -
Mch2g1486 926 Pfam Leucine rich repeat N-terminal domain 26 69 IPR013210 -
Mch2g1486 926 FunFam Leucine-rich repeat protein kinase family protein 190 289 - -
Mch2g1486 926 PANTHER RECEPTOR-LIKE PROTEIN 55 47 904 - -
Mch2g1486 926 Gene3D Phosphorylase Kinase; domain 1 603 707 - -
Mch2g1486 926 Pfam Leucine Rich Repeat 121 143 IPR001611 GO:0005515(InterPro)
Mch2g1486 926 Pfam Leucine Rich Repeat 272 292 IPR001611 GO:0005515(InterPro)
Mch2g1486 926 Pfam Leucine Rich Repeat 249 270 IPR001611 GO:0005515(InterPro)
Mch2g1486 926 FunFam receptor-like protein kinase FERONIA 600 707 - -
Mch2g1486 926 CDD STKc_IRAK 638 906 - -
Mch2g1486 926 ProSiteProfiles Protein kinase domain profile. 632 907 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g1486 926 ProSitePatterns Serine/Threonine protein kinases active-site signature. 752 764 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch2g1486 926 ProSitePatterns Protein kinases ATP-binding region signature. 638 660 IPR017441 GO:0005524(InterPro)
Mch2g1486 926 Gene3D Ribonuclease Inhibitor 27 189 IPR032675 -
Mch2g1486 926 Gene3D Ribonuclease Inhibitor 190 289 IPR032675 -
Mch2g1486 926 SUPERFAMILY L domain-like 289 404 - -
Mch2g1486 926 Gene3D Transferase(Phosphotransferase) domain 1 708 921 - -
Mch2g1486 926 SMART serkin_6 632 907 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g1486 926 SUPERFAMILY Protein kinase-like (PK-like) 613 903 IPR011009 -
Mch2g1486 926 SUPERFAMILY L domain-like 25 306 - -
Mch2g1486 926 Pfam Protein tyrosine and serine/threonine kinase 635 902 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch2g1486 926 Gene3D Ribonuclease Inhibitor 290 429 IPR032675 -
Mch2g1486 926 FunFam Leucine-rich repeat family protein 28 189 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g1486 Mch-Chr2:11215015 Mch5g2026 Mch-Chr5:19850283 0 dispersed
Mch2g1486 Mch-Chr2:11215015 Mch1g0602 Mch-Chr1:10190215 3.21E-83 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77232 PF07714 PK_Tyr_Ser-Thr 5.50E-43 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g1486 - - - 0.0