Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g1499 ATGTTTGATGCTAGAGGAGGCAAGAGATCCCCCTGTCAATTATTGTGTGAAGAAGGAGATACTCCCATGGCCATGTCTCCAGTGCTCTATAGATGGAGTCCTCTAAGACGGATCGTTCAGGGGCTGGTATTATTCTATTTGTTGAGGTTGAATTATGCATCCACGGATCCTGATGTGGAAGGAGAAGCTTTGGTTGATTTTTTAGAGGCTCTAAATGATTCCAATCATCAGATAACTGATTGGAATTATCATCTTGTAAGCCCTTGCTTCAGTTGGTCTCATATTGCCTGCCGAAATGGAAATGTCATTTCCTTGAGCTTGGGTTCAGTGGGATTTTCAGGATCACTTTCTCATTCAATTACCAAACTGAAATTCTTGGCTAGCTTGGATTTGCAGAACAATAATATAGTGGGTGTTCTACCAGATTATCTAGCTAACATGACTCACCTACAGAACTTGAATCTTGCTAATAACAACTTTAATGGCCCTATACCTGTGGCTTGGGGTCAACTTTATGGTCTTAAACATCTGGATCTCTCAGACAACAACTTGACAGGAGAAGTTCCAGCACAATTGTTTTCAATTCCAATGTTCAATTTTTCAGGAACTGGTTTAGCATGTGGGCATAGCTTGGATAAACCTTGTGTCTCCACCTCTCCCCATCGAGCTTCTGCAAAAAGTTCAAAATTTGGGGTAGTAGCAAGTACTGCAAGTTGTGGGGGATTCATTCTTCTGTCAATTGGTGCCTTCTTTGTTTATAGATGCTGCTACATGCATAAGCTTAAGGATTCTATGTTTGTTGATGTTGCTGGTGAAGATGACTGTAAACTTTCCTTTGGGCAAATCAGAAGATTTTCTCTGCGGGAAATCCAACTTGCTACCGAAAACTTTAACGAAACGAACATCATCGGCCAAGGAGGCTTTGGGAAAGTATATAAAGGCGTCCTCTCGGATGCCTCAAAGGTTGCCGTGAAACGGTTAACTGACTACAATAGTCCTGGTGGGGAGGCTGCATTCCTAAGAGAAGTTCAACTAATAAGTGTTGCAGTGCATCGCAATCTCCTCCGATTGATCGGGTTCTGCACAACTGCGTCTGAGAGAATCCTTGTTTATCCCTTCATGCAGAATCTTAGTGTGGCGCATCACTTGAGAGATTTAAAGCCTGGAGAAAGAAGCTTGGACTGGCCCTCAAGGAAACGGATTGCTTTTGGTGCAGCACATGGTTTGGAGTACTTGCATGAGCACTGTAATCCCAAGATCATTCATCGTGATCTAAAGGCTGCAAATATCTTACTAGATGACAACTTTGAAGCTGTTCTTGGAGATTTCGGGCTGGCCAAGCTAGTCGATACTAAATTGACTCATATTACCACTCAAGTGCGCGGTACGATGGGTCACATTGCCCCTGAATACTTGTCCACTGGAAAATCGTCTGAAAAGACAGATGTTTTTGGATATGGTATAACGCTTCTGGAACTCGTCACCGGTCAACGAGCAATTGATTTCTCCCGCCTTGAAGAGGAGGAAGATGTTCTTCTACTTGATCATATAAAGAAACTGCAGAGGGAGAATAGGCTTGGAGATGTTGTGGATAAAAACTTAAAGAGTTATGATGTGAAAGAAGTCGAAAACATCGTTCAAGTGGCATTGCTTTGCACCCAAAGTTCACCGGAGGACCGCCCGACGATGGCGGAAGTTGTGAATCTACTCCATGGAGAAGGGCTGGCAGATAGGTGGGCAGAGTGGATGCAGCTGGAAGAGGTAAGAGATCAAGAAATGCCCTTATTGTGCCACCAATTTGTTTGGGGTGAAGAGTCAAGCCATGATCAAGAAGCCATACAGTTGTCTAAAGCCAGATAG 1860 43.49 MFDARGGKRSPCQLLCEEGDTPMAMSPVLYRWSPLRRIVQGLVLFYLLRLNYASTDPDVEGEALVDFLEALNDSNHQITDWNYHLVSPCFSWSHIACRNGNVISLSLGSVGFSGSLSHSITKLKFLASLDLQNNNIVGVLPDYLANMTHLQNLNLANNNFNGPIPVAWGQLYGLKHLDLSDNNLTGEVPAQLFSIPMFNFSGTGLACGHSLDKPCVSTSPHRASAKSSKFGVVASTASCGGFILLSIGAFFVYRCCYMHKLKDSMFVDVAGEDDCKLSFGQIRRFSLREIQLATENFNETNIIGQGGFGKVYKGVLSDASKVAVKRLTDYNSPGGEAAFLREVQLISVAVHRNLLRLIGFCTTASERILVYPFMQNLSVAHHLRDLKPGERSLDWPSRKRIAFGAAHGLEYLHEHCNPKIIHRDLKAANILLDDNFEAVLGDFGLAKLVDTKLTHITTQVRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSRLEEEEDVLLLDHIKKLQRENRLGDVVDKNLKSYDVKEVENIVQVALLCTQSSPEDRPTMAEVVNLLHGEGLADRWAEWMQLEEVRDQEMPLLCHQFVWGEESSHDQEAIQLSKAR 619
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 11400069 11408777 - MC02g1243 Mch2g1499 682421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g1499 619 SUPERFAMILY L domain-like 61 196 - -
Mch2g1499 619 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 46 618 - -
Mch2g1499 619 ProSitePatterns Protein kinases ATP-binding region signature. 303 325 IPR017441 GO:0005524(InterPro)
Mch2g1499 619 Pfam Leucine rich repeat N-terminal domain 60 97 IPR013210 -
Mch2g1499 619 FunFam Leucine-rich repeat receptor-like kinase 59 171 - -
Mch2g1499 619 Pfam Protein tyrosine and serine/threonine kinase 301 569 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch2g1499 619 FunFam Somatic embryogenesis receptor-like kinase 1 374 590 - -
Mch2g1499 619 ProSiteProfiles Protein kinase domain profile. 297 583 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g1499 619 SMART serkin_6 297 570 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g1499 619 Pfam Leucine rich repeat 126 184 IPR001611 GO:0005515(InterPro)
Mch2g1499 619 Gene3D Phosphorylase Kinase; domain 1 266 373 - -
Mch2g1499 619 Gene3D Ribonuclease Inhibitor 57 217 IPR032675 -
Mch2g1499 619 ProSitePatterns Serine/Threonine protein kinases active-site signature. 420 432 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch2g1499 619 Gene3D Transferase(Phosphotransferase) domain 1 374 590 - -
Mch2g1499 619 SUPERFAMILY Protein kinase-like (PK-like) 278 570 IPR011009 -
Mch2g1499 619 FunFam Somatic embryogenesis receptor kinase 1 266 373 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0671 Mch-Chr10:4619136 Mch2g1499 Mch-Chr2:11400069 3.76E-197 dispersed
Mch2g1499 Mch-Chr2:11400069 Mch8g0035 Mch-Chr8:204411 3.56E-129 dispersed
Mch2g1499 Mch-Chr2:11400069 Mch4g1546 Mch-Chr4:18782427 2.24E-124 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77233 PF00069 Pkinase 4.50E-44 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g1499 - - - 0.0