Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g1536 ATGGAGTCTCCGTTGAAGCTATACTCCTTCTGGGGAAGCACTTGTGCTCAACGAGTTCAAATTGCACTCAACTTGAAAGGGCTGAATTTTGAGTACAAAGCTGTTGACATAATGAAGGGAGAGCATTCCAGTCCTGAGTATCTCAAGCTCAATCCTGTCGGTTTTGTACCTACTCTCGTGGATGGGAATATCGTCATTGCCGACTCTTTTGCTATCATAATGTATTTGGAGGAAAAGTTTCCAGAACATCCTCTATTGCCTCAGGATCTTCATAAAAGGGCTATTAATTATCAGGCTGCAAATATTGTCTCTTCGAGCATACAACCTCTCCAAAATCTTGTTGTTGAGAAATACATCGAGGAAAAATCAGGTCCTGAGGAGAAACTTTCCTGGGTTCATCACGTCATTGGAAAAGGCTTTTCAGCACTTGAAAAGTTGCTAACAGATCATGCAGGAAAATTTGCAACTGGAGATGAAATTTATCTGGCAGACTTGTTTTTGGCTCCTCAGCTTTATCGAGCCATTGAAACATTCAATGTTGACATGTCGAAATTTCCACTTTTATTGAGGTTGAATGAGGAATATGATAAGGTACCAGCATTTCAAGATGCATCACCATTGAAGCAGCCTGATGCTCCTTCTCAAAGCTCTACCTAA 657 40.94 MESPLKLYSFWGSTCAQRVQIALNLKGLNFEYKAVDIMKGEHSSPEYLKLNPVGFVPTLVDGNIVIADSFAIIMYLEEKFPEHPLLPQDLHKRAINYQAANIVSSSIQPLQNLVVEKYIEEKSGPEEKLSWVHHVIGKGFSALEKLLTDHAGKFATGDEIYLADLFLAPQLYRAIETFNVDMSKFPLLLRLNEEYDKVPAFQDASPLKQPDAPSQSST 218
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 11872323 11877554 + MC02g1267 Mch2g1536 682458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g1536 218 SFLD Main (cytGST) 5 189 - -
Mch2g1536 218 FunFam Glutathione S-transferase Z1 3 87 - -
Mch2g1536 218 CDD GST_C_Zeta 90 209 IPR034330 -
Mch2g1536 218 CDD GST_N_Zeta 5 77 IPR034333 -
Mch2g1536 218 Pfam Glutathione S-transferase, C-terminal domain 121 199 IPR004046 -
Mch2g1536 218 SFLD Glutathione Transferase (cytosolic) 5 189 IPR040079 -
Mch2g1536 218 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 84 IPR004045 -
Mch2g1536 218 Gene3D Glutaredoxin 3 87 - -
Mch2g1536 218 NCBIfam maleylacetoacetate isomerase 6 212 IPR005955 GO:0003824(InterPro)|GO:0005737(InterPro)|GO:0009072(InterPro)
Mch2g1536 218 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 214 IPR010987 -
Mch2g1536 218 Gene3D - 88 215 - -
Mch2g1536 218 Pfam Glutathione S-transferase, N-terminal domain 7 83 IPR004045 -
Mch2g1536 218 SUPERFAMILY GST C-terminal domain-like 84 213 IPR036282 -
Mch2g1536 218 PANTHER MALEYLACETOACETATE ISOMERASE 1 212 - GO:0004364(PANTHER)|GO:0006559(PANTHER)|GO:0006749(PANTHER)|GO:0016034(PANTHER)
Mch2g1536 218 FunFam Maleylacetoacetate isomerase 88 215 - -
Mch2g1536 218 SUPERFAMILY Thioredoxin-like 4 88 IPR036249 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g1536 Mch-Chr2:11872323 Mch5g0313 Mch-Chr5:2124250 1.80E-83 dispersed
Mch2g1536 Mch-Chr2:11872323 Mch2g1538 Mch-Chr2:11898742 5.31E-126 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g1536 K01800 - csv:116401624 362.073