Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g1538 ATGGCTGAAAATGCGGCGGCGGCGGCGGCGGCGACGGCGGCGACGGCGGCGGGAGCTTCTCCGTTGAAGCTTTACTCGTACTGGAGGAGCTCTTGTGCTCACCGTGTTCGGATTGCCCTAAACTTGAAAGGGCTAAATTTCGAGTACAAGGCTGTTAACTTATTGAAGGGAGAGCAATTCACTCCCGAATATGAAAAGCTAAATCCTATCGGTTATGTACCTACTCTTGTTGATGGGGATTCTGTTATTGCCGACTCTTTTGCAATACTAATGTATTTGGAGGAAAAGTATCCTCAGCATCCTCTGTTGCCTCGAGATCTTCATAAAAGGGCTATTAATTACCAGGCTGCGAACATTGTTTCTTCTAGCATACAGCCTCTTCAAAATCTAGCTGTTCTGAAGTACATTGAGGAAAAATCTGGTCCAGAGGAGAAACTTTCTTGGGTTCGACATCACATCGGAAAAGGTTTTTCTGCCCTTGAAAAGCTGCTACAAGATCATGCTGGAAAATTTGCCACCGGAGATGAAATTCTTCTGGCAGACTTGTTTTTGGCACCTCAGCTTAACGGCGCCATTACAAGATTCAATGTTGACATGTCCAAATTCCCACTTTTATCCAGGTTGAATGAGGAATACAAAGATATACCAGCATTCCAAGATGCAGCACCAGAGAAGCAGCCTGATGCTCCTCAAAGCTCTCACTAA 705 45.53 MAENAAAAAAATAATAAGASPLKLYSYWRSSCAHRVRIALNLKGLNFEYKAVNLLKGEQFTPEYEKLNPIGYVPTLVDGDSVIADSFAILMYLEEKYPQHPLLPRDLHKRAINYQAANIVSSSIQPLQNLAVLKYIEEKSGPEEKLSWVRHHIGKGFSALEKLLQDHAGKFATGDEILLADLFLAPQLNGAITRFNVDMSKFPLLSRLNEEYKDIPAFQDAAPEKQPDAPQSSH 234
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 11898742 11904131 + MC02g1269 Mch2g1538 682460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g1538 234 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 20 101 IPR004045 -
Mch2g1538 234 SFLD Glutathione Transferase (cytosolic) 22 207 IPR040079 -
Mch2g1538 234 SUPERFAMILY GST C-terminal domain-like 101 230 IPR036282 -
Mch2g1538 234 SUPERFAMILY Thioredoxin-like 17 105 IPR036249 -
Mch2g1538 234 CDD GST_N_Zeta 22 94 IPR034333 -
Mch2g1538 234 Pfam Glutathione S-transferase, C-terminal domain 134 217 IPR004046 -
Mch2g1538 234 SFLD Main (cytGST) 22 207 - -
Mch2g1538 234 Pfam Glutathione S-transferase, N-terminal domain 20 94 IPR004045 -
Mch2g1538 234 Gene3D - 105 232 - -
Mch2g1538 234 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 106 231 IPR010987 -
Mch2g1538 234 FunFam Glutathione S-transferase Z1 20 104 - -
Mch2g1538 234 CDD GST_C_Zeta 107 226 IPR034330 -
Mch2g1538 234 PANTHER MALEYLACETOACETATE ISOMERASE 22 229 - GO:0004364(PANTHER)|GO:0006559(PANTHER)|GO:0006749(PANTHER)|GO:0016034(PANTHER)
Mch2g1538 234 NCBIfam maleylacetoacetate isomerase 23 229 IPR005955 GO:0003824(InterPro)|GO:0005737(InterPro)|GO:0009072(InterPro)
Mch2g1538 234 Gene3D Glutaredoxin 20 104 - -
Mch2g1538 234 FunFam Maleylacetoacetate isomerase 105 232 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g1538 Mch-Chr2:11898742 Mch5g0313 Mch-Chr5:2124250 1.46E-91 dispersed
Mch2g1536 Mch-Chr2:11872323 Mch2g1538 Mch-Chr2:11898742 5.31E-126 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g1538 K01800 - csv:101213302 359.762