Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g1588 ATGGACGGGCAAGAGTCGGCATCCAATTCCACAGACGATACAATCGTCTGCTATGCTCCAACCATGATCACTACAAATGGGGTGTGGCAGGGCGATAACCCTTTGGATTATTCTCTCCCCCTCTTCATCTTGCAGTTAACAATGGTAGTCGTCTTGACTCGCACTCTCGTTTTCCTCTTGAAACCCTTTCGCCAACCTCGAGTCATCTCTGAAATTTTGGGTGGAGTGATTCTGGGGCCTTCGGTACTGGGGAGGAACGCTAAATTTGCCAACGCCATGTTTCCTTTAAGAAGTGTAATGGTGCTTGAAACAATGGCGAACGTGGGGCTTCTCTACTTTCTGTTTTTGGTTGGTGTGGAGATGGATCTCTCAGTGGTTCGTCGAACTGGGAAGAAGGCAATGGCCATAGCTTTGGCTGGAATGATTCTTCCATTTGGAATAGGAGCTGCATTTTCAAACCAGATGCATGAAAAGTGGGAAAAAGACATGAACTTGGGCACTTACATTATGTTTCTTGGTGTTGCCCTCTCTGTGACTGCTTTCCCAGTGCTTGCTAGAGTCCTTGCAGAGCTTAAACTGATTAATTCAGAGCTAGGAAGGATTGCTATGGCTTCTGCCCTTTTTAATGATATGTGTGCCTGGGTTCTCTTAGCTTTAGCCATAGCCTTATCTGAGAATGATTCCTCATCTTTGGCTTCTTTATGGGTTGTACTCTCAAGTGCAAGCTTTGTTCTGTTTTGCATCTTCATCGTTCGACCGACCATCTCATGGATGATTCGAAGAACCCCAGAAGGAGAAAGTATCAGTGAGTTCTACATCTGTTTGATTCTCACAGGGGTTATGATCTCAGGGTTTGTTACAGATGCCATTGGAACACACTCAGTTTTTGGGGCTTTTGTATTTGGGTTGGTTATTCCAAATGGACCACTTGGGGTGACTCTAATTGAGAAGCTTGAGGACTTTGTCTCAGGGCTTTTGCTCCCTCTTTTCTTTGCCATAAGTGGGCTTAAGACTAATGTATCTGCCATAAAAGGAATTGGCACTTGGATATCTGTTCTATCCATCACTGTCCTTGCTTGTATTGGCAAAGTCATTGGAACTCTCCTTGCCTCCATTTGTTATCAGATGTCGTATCGTGAAGGCGTCACGTTAGGCTTGCTTATGAACACCAAAGGCCTCATTGAAATGATCATCCTCAACGTCGGAAAGGACCAAAAGGTACTAGATGATCAGACATTTACAATTATGGTGATTGTAGCTATCACTATGACAGGGATCATAACACCTGCAGTTACCGTAATCTATAGGCCAACAAGAAGGTTTCTACCATATAAGAAACGAACGATTCAAGCATCGAAACCAGATTCGGAGTTCCGAGTACTAGTCTGCATCCACACACCTCGAAACGTACCAACAATCATCAACCTCCTTGATGCATCCTACCCAACCAAGAGATCCCCAATTTGCATATATGTGCTGCACTTGGTGGAACTCACAGGACGAGCCTCCGCCATGCTCATTGTCCACAACACCAGAAAATCAGGTCGCCCTGCCCTAAATCGAACCCAGGCTCAATCAGATCACATCATCAATGCATTCGAGAACTATGAACAACACGTTGATTGCGTCTCAGTCCAGCCCCTAACAGCCATTTCCCCCTACTCCACAATGCACGAAGACATCTGCAATTTAGCCGAGGACAAACGCGTTGCCTTCATAATCATCCCATTCCACAAGCAACAAACCGTCGATGGAGGAATGGAAGCTACAAATCCAGCATTCAGATTGGTAAACCAAAATGTGTTATCCAACGCACCTTGCTCCGTCGGAATCCTAGTGGATCGGGGCCTAAATGGCTCCACTCGAACCGCATCGAACAAGGCGTCTCACTACAACATAATCTTGTTGTTCTTCGGCGGACAAGACGACAGAGAAGCTTTAGCATACGCGTGGAGAATTTCAGAGCATCCAGGAGTGAGCTTAACCGTAATGAGATTCATCGCCGGAGTAGAAGCAGTCGAACCAAAACCAGAAGACAACGAACCTACAGCTTTAACCATGGAAACAGAAATCGACAAAGACAGGCAGCTAGACGAGGAATTCGTAAACGAATTCAGGACGAAGAATGTGAACAACGAGTCGGTCACTTACACGGAGAAGGTGTTGAACAACGGCGAGGAGACAGTGGCGGCCATTAGAGCAATGAGCGATGCTCACGACCTGTTTATCGTGGGCAGAGGAGAAGCTAGGGCATCGCCTCTAACTGCCGGACTCACGGACTGGAGCGAGTGCCCGGAGCTGGGAGCAATCGGAGATCTGCTAGCTTCGTCGGATTTTGCGGCGACGACTTCGGTTTTGGTAGTGCAGCAGTTCGCCGGGGCGGCGGCGGCGGCGGCGGGGCATGGAGAAGAAGAGTTCTTAACAGATTTCAATAATCCAGAGGAACCCTTCCAAAGCTTGAGATCCGTAAACACCAGGCAACATCCTCCACCAAGGCCTCCTCAAATGATGTACAATACA 2520 47.14 MDGQESASNSTDDTIVCYAPTMITTNGVWQGDNPLDYSLPLFILQLTMVVVLTRTLVFLLKPFRQPRVISEILGGVILGPSVLGRNAKFANAMFPLRSVMVLETMANVGLLYFLFLVGVEMDLSVVRRTGKKAMAIALAGMILPFGIGAAFSNQMHEKWEKDMNLGTYIMFLGVALSVTAFPVLARVLAELKLINSELGRIAMASALFNDMCAWVLLALAIALSENDSSSLASLWVVLSSASFVLFCIFIVRPTISWMIRRTPEGESISEFYICLILTGVMISGFVTDAIGTHSVFGAFVFGLVIPNGPLGVTLIEKLEDFVSGLLLPLFFAISGLKTNVSAIKGIGTWISVLSITVLACIGKVIGTLLASICYQMSYREGVTLGLLMNTKGLIEMIILNVGKDQKVLDDQTFTIMVIVAITMTGIITPAVTVIYRPTRRFLPYKKRTIQASKPDSEFRVLVCIHTPRNVPTIINLLDASYPTKRSPICIYVLHLVELTGRASAMLIVHNTRKSGRPALNRTQAQSDHIINAFENYEQHVDCVSVQPLTAISPYSTMHEDICNLAEDKRVAFIIIPFHKQQTVDGGMEATNPAFRLVNQNVLSNAPCSVGILVDRGLNGSTRTASNKASHYNIILLFFGGQDDREALAYAWRISEHPGVSLTVMRFIAGVEAVEPKPEDNEPTALTMETEIDKDRQLDEEFVNEFRTKNVNNESVTYTEKVLNNGEETVAAIRAMSDAHDLFIVGRGEARASPLTAGLTDWSECPELGAIGDLLASSDFAATTSVLVVQQFAGAAAAAAGHGEEEFLTDFNNPEEPFQSLRSVNTRQHPPPRPPQMMYNT 840
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 12778493 12781309 + MC02g1290 Mch2g1588 682510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g1588 840 Gene3D - 483 765 - -
Mch2g1588 840 MobiDBLite consensus disorder prediction 809 840 - -
Mch2g1588 840 PANTHER CATION/H + ANTIPORTER 17 791 IPR050794 GO:0006885(PANTHER)|GO:0012505(PANTHER)|GO:0015672(PANTHER)
Mch2g1588 840 Gene3D - 41 440 IPR038770 -
Mch2g1588 840 Pfam Sodium/hydrogen exchanger family 52 429 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Mch2g1588 840 FunFam Cation/H(+) antiporter 15 41 442 - -
Mch2g1588 840 MobiDBLite consensus disorder prediction 812 826 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g0737 Mch-Chr1:11227541 Mch2g1588 Mch-Chr2:12778493 9.01E-214 dispersed
Mch1g0739 Mch-Chr1:11238311 Mch2g1588 Mch-Chr2:12778493 1.19E-198 dispersed
Mch2g0804 Mch-Chr2:5533680 Mch2g1588 Mch-Chr2:12778493 3.97E-152 dispersed
Mch2g1588 Mch-Chr2:12778493 Mch8g1039 Mch-Chr8:7322642 1.51E-225 dispersed
Mch2g1588 Mch-Chr2:12778493 Mch9g1415 Mch-Chr9:16540204 2.39E-161 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g1588 K26731 - csv:101219265 1405.96