Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g1618 ATGACCATTACACTCCAAAATAAGTCCATCTTCCCTCTCTCCAGATCTGCTTCTCTCTTAATTTCCATGGTCTCTCTCCTCGCTCTCTCCCTCTCTCTTTATCTCTCCTCCGCCACCCACCACCGCCGCCTCCAATCTCTCCGCCCTGATATCGCCGCCGCCTGCGCCGCCACCCGTTTCCCGGACCAATGCGGATCCTCCATTTCCCAATCCAACCGCCTCCCGCCAAATCCGACGCCGCTCCAAATCCTCCAAGCCGCCGTCTCGCTCTCGTCGGAGAATCTCCGGACCGCGCAGTCCATGGTCCAGGCAATTCTGGACTCGTCCGCTGACAGCCGGAACCGCAGCGCCGCGGCGCTGGCCTGCCTCGAAGCGCTGGGCTACTCGGAGTATCGAATTTCTCTCGCGAACGACGCCGTTCCACAGGGACGTAACAAGGACGCGCGCGCGTGGCTGAGCGCGTCGTTGCTGTACCAGTCCGGTTGCCGGTCCGGGCTGAAGAACGTGAATGACACGCGCGCGGTGGGTGATACGATGTCGTTTCTTGACTACTTGATTGGGCTGTCGAGCAACGCGCTGAGCATGGCGGTGGCGTACGACGTCTACGGGAACGAGACGGCGGTTTGGCGGCCGCCGAGGACGGAGCGGGACGGGTTCTGGGAGGGTAGTGGGCCCGGCGGGTCGGCGTTCGTCGGCGGCGGGTTTCCGTCGGAGTTGGCGGCGGACGCGACGGTGTGCAAAGATGGGAGCGGCGGGTGTTACAAGACAGTGCAGGAAGCGGTGGATGCGTCGCCGGAGAACGCGGCGGCGCGTAGGTTTGTGATCCACATAAAGGAAGGGGTGTACGAGGAGATCGTGAGAGTGCCATTGAAAAAGAAGAACGTGGTATTTTTTGGAGATGGGATGGGCAAAACCGTCATTTCAGGGTCACTCAATGTGGGCCAGCCTGGGATCTCAACCTACAATTCGGCTACCGTCGGAGTTGCTGGTGACGGATTCATGGCCAGTGGGCTGACCATTGAGAACACAGCAGGGCCTGATGCCCATCAAGCTGTGGCCTTCAGATCAGACAGCGATCTCTCCGTTATCCAAAACTGTGAGTTTATAGGCAACCAAGACACTCTCTACGCCCATTCCCTACGCCAATTCTACAACTCCTGCCGAATCCTAGGCAATGTGGACTTCATCTTTGGAAACTCGGCCTCCATCTTCCAGGACTGCCACATCCTACTCCGCCCTCGGCCCACCGGTGGCGACTACCCCGTCACTGCCCACGGTAGGACCGACCCCGCCCAGTCCACCGGCTTCGTCTTCCTCAATTGCCTTGTTAACGGCACCGAGGAGTTCATGTCCTTGTACTATGCCGATCCTCGGGTGCATAGGACCTTCTTGGGGCGGCCCTGGAAGGAGTATTCGAGGACGGTTTTCATACATTGTGATCTCGAAGCTGTTGTTTCCCCTTTTGGGTGGTCACCGTGGAGCGGGGAGTTTGCTTTGAACACTCTGTTTTATGGGGAGTTTGAGAATTTCGGGATCGGTTCGAATTTGTCCGAGAGAGTCGGGTGGAGTAGCCAGATCCCAGCGGAGTATGTTTCTACTTACTCGGTTGAGAACTTCATTCAAGGAAATGAATGGATTCCATTAAGCTCGTGA 1653 57.89 MTITLQNKSIFPLSRSASLLISMVSLLALSLSLYLSSATHHRRLQSLRPDIAAACAATRFPDQCGSSISQSNRLPPNPTPLQILQAAVSLSSENLRTAQSMVQAILDSSADSRNRSAAALACLEALGYSEYRISLANDAVPQGRNKDARAWLSASLLYQSGCRSGLKNVNDTRAVGDTMSFLDYLIGLSSNALSMAVAYDVYGNETAVWRPPRTERDGFWEGSGPGGSAFVGGGFPSELAADATVCKDGSGGCYKTVQEAVDASPENAAARRFVIHIKEGVYEEIVRVPLKKKNVVFFGDGMGKTVISGSLNVGQPGISTYNSATVGVAGDGFMASGLTIENTAGPDAHQAVAFRSDSDLSVIQNCEFIGNQDTLYAHSLRQFYNSCRILGNVDFIFGNSASIFQDCHILLRPRPTGGDYPVTAHGRTDPAQSTGFVFLNCLVNGTEEFMSLYYADPRVHRTFLGRPWKEYSRTVFIHCDLEAVVSPFGWSPWSGEFALNTLFYGEFENFGIGSNLSERVGWSSQIPAEYVSTYSVENFIQGNEWIPLSS 550
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 13377755 13382821 + MC02g1304 Mch2g1618 682540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g1618 550 Gene3D Invertase/pectin methylesterase inhibitor family protein 48 198 IPR035513 -
Mch2g1618 550 NCBIfam pectinesterase inhibitor domain 24 193 IPR006501 GO:0004857(InterPro)
Mch2g1618 550 PANTHER PECTINESTERASE 25 547 - GO:0030599(PANTHER)|GO:0046910(PANTHER)
Mch2g1618 550 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 50 195 IPR035513 -
Mch2g1618 550 Pfam Plant invertase/pectin methylesterase inhibitor 51 195 IPR006501 GO:0004857(InterPro)
Mch2g1618 550 SMART PMEI_2 46 195 IPR006501 GO:0004857(InterPro)
Mch2g1618 550 CDD PMEI-like_3 53 195 - -
Mch2g1618 550 FunFam Probable pectinesterase/pectinesterase inhibitor 51 49 198 - -
Mch2g1618 550 Pfam Pectinesterase 242 543 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Mch2g1618 550 SUPERFAMILY Pectin lyase-like 239 548 IPR011050 -
Mch2g1618 550 Gene3D - 236 550 IPR012334 -
Mch2g1618 550 FunFam Pectinesterase 4 239 550 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g1618 Mch-Chr2:13377755 Mch2g1641 Mch-Chr2:13950534 2.32E-278 dispersed
Mch2g1618 Mch-Chr2:13377755 Mch9g0172 Mch-Chr9:1300301 1.28E-88 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g1618 - - - 0.0