Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g1622 ATGGTTCCTGTAGCCCCGCCGCGCGACGGCCAACGGCCCGAAATCTGCCCGAAATTCTCCATTTCTCCGCCTCAATCTCACATTTTCCGATCAAAATTACCGGACATTTCCATCCCCGATCACCTCCCCCTCCACTCCTACTGCTTCCAGAATCTCTCTGTTTTCTCCCATCGCCCCTGTTTGATCCTCGGCTCCACCGGAGAATCCTATTCCTACTCCCAAACCCACCGATTCTCGCGTCAGACCGCCGCGACTTTCTCCAAACTCGGAATCCGCAGAGGCGACGTTGTCATGATTCTCCTCCACAACTCTCCGGAGTTCGTTTTCTCTTTCATGGCGGCGTCCATGCTCGGCGCCGTCTCCACCGCCGCCAACCCGCACTTCACGGCGGCGGAGATTTCCAAGCAATTGAAGGCCTCCGGAGCAAAATTGATTGTTACCTATTCGCGATGCGTCGACAACGTCCGGGAATGCGGCGGGGATTTCACTGTGATCGCTGTCGACGAGTCGCCGGAGACGAAGGACTGCCTGAATTTCTCGGTGGTTTATGAGGCGGATGAAAACGAGGTTCCGGCGGTGGAGATTGCCCCAAACGACGCCGTTGCGCTGCCGTTCTCCTCCGGCACGACGGGGCTCCCCAAGGGCGTGGTCCTCACGCACAAGAGTATGGTCTCCAGCGTCGCTCAGCAGGTGGATGGAGAGAACCCGAATATTTATTTGAGAACGGACGATGTCGTTTTATGCGTGCTTCCAATGTTCCACATATTCTCATTAAGCAGCGTGATTTTGAGTTCGATTAGATGTGGAGCTGCAATATTGTTGATGGAGAAGTTCGAGATAGAAGCGCTCTTGCGACTTATAGAGAGGCATCGGGTTACCGTGGCGGCGGTGGTCCCGCCGCTGGTGTTGGCGCTGGCGAAGAATTCGAAAGTGGCAGAGTTCGATTTGAGCTCTATTAGAATGGTGCACTCTGGTGCGGCTCCGCTAAGAAAGGAGTTGGAGGAAGCCCTCATGCAAAAGATGCCTCAAGCAACTTTTGGCCAGGGTTATGGGATGACAGAGGCCGGGCCGGTGGTGAGCATGTGCTCGGCCTTCGCGAAGGAGCCGATGGCCACGAAGTCAGGGTCGTGCGGCAGAGTGGTGCGAAACGCAGAGCTGAAGGTCATTGACCCACAAACTGGCTCCTCCCTCGGCTATAATCAACCTGGAGAGATTTGCATTCGTGGCCCCCAAATTATGAAAGGATATTTGAACAACCCAGAGGCAACGTCATTGACCATAGACATGGAGGGTTGGCTTCATACAGGTGACATCGGTTATGTTGACGACGATGAAGAGATTTTCATTGTCGACAGAGTCAAAGAGATTATTAAATTCAAAGGTTTTCAGGTGGCACCGGCTGAGTTAGAGGCGATTCTTATAACCCATCCATCTATCGTGGATGCAGCAGTTGTCCCGCAAAAGGATGAAGTTGCTGGTGAAGTTCCGGTGGCTTTCGTGGTTAAATCAACCGATCACGAACTTACCGAAGAGGCAGTAAAAGAATTCATAGCAAAGCAGGTAGTGTTCTACAAGAGATTGCAGAGGGTTTTCTTTGTGCAGACAATTCCGAAATTGCCCTCAGGAAAAATCTTGAGAAAAGACCTCAAAGCCAAGCTTTCACCTGCCTTTTAA 1674 52.45 MVPVAPPRDGQRPEICPKFSISPPQSHIFRSKLPDISIPDHLPLHSYCFQNLSVFSHRPCLILGSTGESYSYSQTHRFSRQTAATFSKLGIRRGDVVMILLHNSPEFVFSFMAASMLGAVSTAANPHFTAAEISKQLKASGAKLIVTYSRCVDNVRECGGDFTVIAVDESPETKDCLNFSVVYEADENEVPAVEIAPNDAVALPFSSGTTGLPKGVVLTHKSMVSSVAQQVDGENPNIYLRTDDVVLCVLPMFHIFSLSSVILSSIRCGAAILLMEKFEIEALLRLIERHRVTVAAVVPPLVLALAKNSKVAEFDLSSIRMVHSGAAPLRKELEEALMQKMPQATFGQGYGMTEAGPVVSMCSAFAKEPMATKSGSCGRVVRNAELKVIDPQTGSSLGYNQPGEICIRGPQIMKGYLNNPEATSLTIDMEGWLHTGDIGYVDDDEEIFIVDRVKEIIKFKGFQVAPAELEAILITHPSIVDAAVVPQKDEVAGEVPVAFVVKSTDHELTEEAVKEFIAKQVVFYKRLQRVFFVQTIPKLPSGKILRKDLKAKLSPAF 557
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 13499053 13505935 - MC02g1307 Mch2g1622 682544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g1622 557 Gene3D - 454 554 IPR045851 -
Mch2g1622 557 FunFam Long-chain-fatty-acid--CoA ligase FadD 30 454 - -
Mch2g1622 557 FunFam 4-coumarate--CoA ligase 2 455 556 - -
Mch2g1622 557 SUPERFAMILY Acetyl-CoA synthetase-like 34 553 - -
Mch2g1622 557 CDD 4CL 38 549 - -
Mch2g1622 557 Gene3D - 22 453 IPR042099 -
Mch2g1622 557 Pfam AMP-binding enzyme 54 417 IPR000873 -
Mch2g1622 557 Pfam AMP-binding enzyme C-terminal domain 468 543 IPR025110 -
Mch2g1622 557 ProSitePatterns Putative AMP-binding domain signature. 203 214 IPR020845 -
Mch2g1622 557 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 25 550 - GO:0016207(PANTHER)|GO:0016405(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g2094 Mch-Chr1:20306948 Mch2g1622 Mch-Chr2:13499053 4.04E-25 dispersed
Mch2g1622 Mch-Chr2:13499053 Mch9g0492 Mch-Chr9:3635471 3.24E-239 dispersed
Mch2g1622 Mch-Chr2:13499053 Mch8g1049 Mch-Chr8:7367318 9.56E-240 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g1622 K01904 - csv:101221344 836.639