Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g1625 ATGGACGCTCTCTTTGTCCATCACTCTTATATCCGCCGCACCACCAACGACGGAGCTCACTCGACCGCCATACCTGTTCCCCGCTTCTCCCTACGTTCTTCACTGATCGGAATCAAGCTACTTCATCTTCATTCTAAGAACTTCCCCTATCCTCGCCTCCGTCGCATCCCTTGCGCCCCCGAGGGCGCCGGTCACCATCACGGCCACCACCATGGGTGCCAGCACCATTGCGACGGTGATGGAGTGGAGCCGACTGGAGCTCAGAAGGCGTTTATTCGATTTGCCAAAGCTATTAGGTGGACGGAGTTGGCGAATTATTTGAGGGAGCATCTACAGTTGTGTTGCGGTTCTGCTGCTTTGTTTCTGACTGCGGCTGCGTGTCCTTATTTGGTGCCTAAACCTGCTGTGAAGCCTCTGCAGAATGTTCTCGTTGCTGTTGCCTTCCCTTTAGTCGGGGTCTCTGCTTCTCTTGATGCTCTTACTGATATTAGTGGTGGGAAAGTGAACATCCATGTACTAATGGCGCTTGCAGCCTTTGCATCAATATTTATGGGGAACCCCTTGGAAGGAGGACTACTTCTCGTGATGTTTAATCTGGCTCATATTGCTGAAGAGTATTTCACAAAGCAATCAATGATTGATGTTAAAGAGTTGAAGGAAAGCCATCCAGATTTTGCTCTTGTTTTGGATATGAATGATGATAACCTTCCTGATACATCAGATCTGGAGCATAGAAGGGTGCCGGTGCGTGACGTGGAAGTGGGCTCATATATCTTGGTGGGAGCTGGTGAGTCTGTCCCTGTAGATTGTGAGGTTTATCAAGGTTGTGCTACAATCACTGTTGAGCACTTGACAGGAGAAGTCAAACCGTTGGAAATAAAGGTTGGGGAAAGAGTTCCCGGTGGAGCAAGAAACTTGGACGGTAGGATCATAGTGAAGGCTACAAAAACATGGGAAGAGTCAACACTTAGCAGGATTGTGCAGTTGACTGAAGAAGCACAACTTAATAAACCCAAGCTACAGAGGTGGCTTGATGAGTTTGGTGAGAACTACAGCAAGGTGGTTGTAGTTTTATCCGTGGCTGTTGCCCTCATTGGACCGTTATTGTTCAAGTGGCCATTTATTTGTACACCAGGTTTCAGAGGATCTGTTTATAGAGCACTTGGGCTCATGGTAGCCGCATCACCATGTGCACTGGCTGCAGCTCCATTGGCATACGCTATTGCAATAAGTTCCTGTGCAAGGAAGGGAATACTTCTGAAAGGTGGACATGTGCTTGATGCTATGGCTTCTTGCCACACTGTTGCATTCGATAAAACTGGGACATTGACCACCGGGGGACTTGTGTTTAAAGCCATAGAACCCATTTTTGGGCACAAGGTTGGAGGAGAAAAAACACATCTAGCTTCCTGCTGCATACCCAGCTGTGAAAAAGAAGCCCTTGCAGTGGCAGCTGCCATGGAAAAGGGTACTACTCACCCAATTGGAAGAGCTGTAGTGGATCATAGTGCGGGGAAAGACCTTCCTTCTATTTCCGTTGAAAGTTTTGAGTATTTTCCTGGAAGAGGTCTCATTGCAACTCTGCATGGCATTAAGTCAGGAATTGGAGGTAAACTGCGGAAAGCATCCCTTGGTTCTGTGGATTTCATCACTTCCTTTTGCAAATCCGAAAATGAATCAAGGAAAATCAAGGAAGCTGTTAGAGCATCATCATATGGAAGTGAATTTGTGCATGCTGCTCTTTCAGTTGATCAAAAGGTAACACTGATTCACCTTGAGGATCAGCCTCGGCCTGGAATGTTAAATGCAATATCAGAATTACAAGATCATGCAAAAGTCCGTGTTATGATGTTAACAGGTGATCATGACTCAAGTGCATGGAAAGTTGCGAACGCTGTGGGCATAAATGAAGTTTACTACAGTCTTAAGCCCGAGGACAAACTTGCTCACGTAAAGGAAATCTCAAGGGAGATGGGGGGCGGTCTCATCATGGTTGGTGAAGGTATAAATGATGCTCCTGCACTTGCTGCAGCGACTGTGGGAATAGTTCTTGCTCGTCGTGCTAGCGCTACTGCTACAGCCGTTGCAGATGTCCTGCTTCTTCAGGACAATATTTCCTGTGTACCGTTCTGCATTGCCAAATCTCGCCAGACAACTTCACTGGTCAAGCAAAATGTGACCCTTGCCTTGTCATCTATCCTTCTTGCCTCTCTCCCATCCGTCTTGGGGTTTCTTCCCTTGTGGTTAACGGTTCTTCTTCACGAGGGTGGCACTCTCCTAGTCTGCCTGAACTCAATACGTGCCCTTAATCAGCCCTCATGGTCATGGAAGCAAGATTTTCAAAATTTGGTTCGTGATGCGAGATCTAGGGTGCTCGCAACACGACAAACTAGTTCGGGTACCATCCAAACTGCATCTTTATAG 2424 47.19 MDALFVHHSYIRRTTNDGAHSTAIPVPRFSLRSSLIGIKLLHLHSKNFPYPRLRRIPCAPEGAGHHHGHHHGCQHHCDGDGVEPTGAQKAFIRFAKAIRWTELANYLREHLQLCCGSAALFLTAAACPYLVPKPAVKPLQNVLVAVAFPLVGVSASLDALTDISGGKVNIHVLMALAAFASIFMGNPLEGGLLLVMFNLAHIAEEYFTKQSMIDVKELKESHPDFALVLDMNDDNLPDTSDLEHRRVPVRDVEVGSYILVGAGESVPVDCEVYQGCATITVEHLTGEVKPLEIKVGERVPGGARNLDGRIIVKATKTWEESTLSRIVQLTEEAQLNKPKLQRWLDEFGENYSKVVVVLSVAVALIGPLLFKWPFICTPGFRGSVYRALGLMVAASPCALAAAPLAYAIAISSCARKGILLKGGHVLDAMASCHTVAFDKTGTLTTGGLVFKAIEPIFGHKVGGEKTHLASCCIPSCEKEALAVAAAMEKGTTHPIGRAVVDHSAGKDLPSISVESFEYFPGRGLIATLHGIKSGIGGKLRKASLGSVDFITSFCKSENESRKIKEAVRASSYGSEFVHAALSVDQKVTLIHLEDQPRPGMLNAISELQDHAKVRVMMLTGDHDSSAWKVANAVGINEVYYSLKPEDKLAHVKEISREMGGGLIMVGEGINDAPALAAATVGIVLARRASATATAVADVLLLQDNISCVPFCIAKSRQTTSLVKQNVTLALSSILLASLPSVLGFLPLWLTVLLHEGGTLLVCLNSIRALNQPSWSWKQDFQNLVRDARSRVLATRQTSSGTIQTASL 807
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 13514422 13526237 - MC02g1308 Mch2g1625 682547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g1625 807 SFLD C1.7: P-type atpase like 418 718 - -
Mch2g1625 807 Gene3D - 209 334 - -
Mch2g1625 807 Pfam haloacid dehalogenase-like hydrolase 434 678 - -
Mch2g1625 807 ProSitePatterns E1-E2 ATPases phosphorylation site. 438 444 IPR018303 -
Mch2g1625 807 Pfam E1-E2 ATPase 243 416 - -
Mch2g1625 807 Gene3D - 447 596 IPR023299 GO:0000166(InterPro)
Mch2g1625 807 SUPERFAMILY Calcium ATPase, transmembrane domain M 172 749 IPR023298 -
Mch2g1625 807 Gene3D - 429 716 IPR023214 -
Mch2g1625 807 SUPERFAMILY Calcium ATPase, transduction domain A 244 329 IPR008250 -
Mch2g1625 807 SFLD p-type atpase 418 718 IPR044492 -
Mch2g1625 807 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 63 804 IPR051949 -
Mch2g1625 807 NCBIfam HAD-IC family P-type ATPase 245 455 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Mch2g1625 807 NCBIfam HAD-IC family P-type ATPase 545 745 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Mch2g1625 807 PRINTS P-type cation-transporting ATPase superfamily signature 588 599 - -
Mch2g1625 807 PRINTS P-type cation-transporting ATPase superfamily signature 611 621 - -
Mch2g1625 807 PRINTS P-type cation-transporting ATPase superfamily signature 436 450 - -
Mch2g1625 807 PRINTS P-type cation-transporting ATPase superfamily signature 689 701 - -
Mch2g1625 807 PRINTS P-type cation-transporting ATPase superfamily signature 665 684 - -
Mch2g1625 807 NCBIfam heavy metal translocating P-type ATPase 170 767 IPR027256 GO:0006812(InterPro)|GO:0016020(InterPro)|GO:0019829(InterPro)
Mch2g1625 807 SUPERFAMILY HAD-like 434 765 IPR036412 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g1272 Mch-Chr2:8862725 Mch2g1625 Mch-Chr2:13514422 0 dispersed
Mch2g1625 Mch-Chr2:13514422 Mch6g0507 Mch-Chr6:3382907 8.32E-52 dispersed
Mch2g1625 Mch-Chr2:13514422 Mch8g2630 Mch-Chr8:29545688 4.19E-53 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g1625 K01534 - csv:101221102 1337.01