Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g1641 ATGCCCACTCGATCCAAGCCCCCAAATCCCACTTTCCTTTTCCTCTCCATGGCCTCCCTCTCCCTCCTCTCCTTCCTCTCCCTCCTCTTCTTCTTCCTCTCCCTCTCCTCCGCCGCCGCCCGCCACCGCCACCCCTCCCGCTTCGCCTCCGCCGTCCCCCCGCCGGAGATCCTCGCCGCCTGCAAGGCCACCCGCTTCCCCGACCAATGCGGATCTTCCCTCTCCCAACACCCCTCTCTCCCCCCCCATCCCTCCCCTCTCCAGATCCTCCACTCCGCCGTCGCCGTCTCCTCCGACGGCCTCGCGGCGGCCCAATCCATGGTCCGGGACATCCTCGGCGCCTCCGCTCGGAACCTCAATCGGACCACCGCCGCCAACAACTGCCTCGAGGTGCTCCGTAACTCCGACTACCGAATCTCCCTCACCAACGACGCGCTCCGGCGCGGCCGTGCCAAGGACGCGCGCGCGTGGATGAGCGCGTCGCTGCTCTACCACTACGATTGCTGGTCCGCGCTCAAGTACGCCAACGACACCCACATGGTGGACAAAACGATGGCGTTTCTTGACTCCCTCATCGGCCTCTCCAGCAACGCGCTCAGCATGATCGTGGCCTACGACCGCTCCGGCGAGGACACGGCCTCGTGGGGCCCGCCGAGGACGGAGCGCGACGGGTTCTGGGAGGGCGGCGGCGGAGGTGGATCTGGGCTGGGATTCAGCGGCGGGTTCCCGTCGAAGCTGGCGGCGGACGCGACGGTGTGCAAGGACGGGAGCGGCGGGTGTTACAAAACCGTGCAGGAAGCGGTAAACGCGGCGCCGGAGAATGCGGCGGCGCGTAGGTTTGTGATCCACATTAAGGAAGGCGTTTATGAGGAGATCGTGAGGGTTCCGCTGGAGAAGAAGAACGTGGTGTTTTTGGGAGATGGCATGGGCAAAACGGTAATTACAGGGTCACTCAATGTGGGACAGCCTGGGCTTTCCACTTACAACACGGCTACAGTCGGAGTTGTTGGTGATGGATTCATGGCCAGTGGCCTCACAATTCAGAACACAGCAGGGCCTGATGCTCACCAAGCTGTGGCCTTTAGATCAGACAGTGATCTCTCAGTCATCCAAAACTGTGAGTTTATAGGCAACCAAGACACTCTCTACGCCCACTCCCTACGCCAGTTCTACAAATCCTGCACAATTCAGGGCAATGTAGATTTCATCTTTGGCAACTCTGCTTCCATCTTCCAGGACTGCAACATCCTCGTCCGCCCCCGCCAGCTCAAGCCCGAGAAGGGAGAGAACAACGCCATCACCGCACACGGCAGGACCGACCCCGCGCAGTCCACCGGTTTCGTGTTCCAGAACTGCCTCATAAATGGCACTGAGGAGTACATGTCGCTGTACTACAGCAAGCCCAAGGTCCACAAGAACTTCCTCGGGAGGCCGTGGAAGGAGTACTCGAGGACTGTTTTCATACACTGTAATCTCGAGGCGCTTGTTTCAGCGCCCGGGTGGATGCCGTGGAGCGGGGATTTCGCCTTGAAGACGCTCTACTACGGGGAGTTTGAGAACTCGGGGGTGGGGGCGAAGTCGTCGGAAAGAGTCGGGTGGAGTAGCCAGATTCCAGCACAGCATGTTTTCAGTTACTCTGTTGAGAATTTCATTCAGGGAGATGAATGGATTCCTTCATCACGGTCTGCTGATGAACCACCAAAAATGTTGGACAGAAAAACCAAAATTGTGAAATTAGATTAG 1743 59.38 MPTRSKPPNPTFLFLSMASLSLLSFLSLLFFFLSLSSAAARHRHPSRFASAVPPPEILAACKATRFPDQCGSSLSQHPSLPPHPSPLQILHSAVAVSSDGLAAAQSMVRDILGASARNLNRTTAANNCLEVLRNSDYRISLTNDALRRGRAKDARAWMSASLLYHYDCWSALKYANDTHMVDKTMAFLDSLIGLSSNALSMIVAYDRSGEDTASWGPPRTERDGFWEGGGGGGSGLGFSGGFPSKLAADATVCKDGSGGCYKTVQEAVNAAPENAAARRFVIHIKEGVYEEIVRVPLEKKNVVFLGDGMGKTVITGSLNVGQPGLSTYNTATVGVVGDGFMASGLTIQNTAGPDAHQAVAFRSDSDLSVIQNCEFIGNQDTLYAHSLRQFYKSCTIQGNVDFIFGNSASIFQDCNILVRPRQLKPEKGENNAITAHGRTDPAQSTGFVFQNCLINGTEEYMSLYYSKPKVHKNFLGRPWKEYSRTVFIHCNLEALVSAPGWMPWSGDFALKTLYYGEFENSGVGAKSSERVGWSSQIPAQHVFSYSVENFIQGDEWIPSSRSADEPPKMLDRKTKIVKLD 580
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 13950534 13953789 + MC02g1313 Mch2g1641 682563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g1641 580 Pfam Pectinesterase 249 554 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Mch2g1641 580 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 57 202 IPR035513 -
Mch2g1641 580 CDD PMEI-like_3 59 202 - -
Mch2g1641 580 SUPERFAMILY Pectin lyase-like 246 560 IPR011050 -
Mch2g1641 580 FunFam Pectinesterase 243 565 - -
Mch2g1641 580 Pfam Plant invertase/pectin methylesterase inhibitor 57 201 IPR006501 GO:0004857(InterPro)
Mch2g1641 580 FunFam Probable pectinesterase/pectinesterase inhibitor 51 55 204 - -
Mch2g1641 580 PANTHER PECTINESTERASE 24 559 - GO:0030599(PANTHER)|GO:0046910(PANTHER)
Mch2g1641 580 SMART PMEI_2 52 201 IPR006501 GO:0004857(InterPro)
Mch2g1641 580 NCBIfam pectinesterase inhibitor domain 26 202 IPR006501 GO:0004857(InterPro)
Mch2g1641 580 Gene3D - 243 564 IPR012334 -
Mch2g1641 580 Gene3D Invertase/pectin methylesterase inhibitor family protein 57 204 IPR035513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g1618 Mch-Chr2:13377755 Mch2g1641 Mch-Chr2:13950534 2.32E-278 dispersed
Mch2g1641 Mch-Chr2:13950534 Mch6g2635 Mch-Chr6:28118747 1.09E-95 dispersed
Mch2g1641 Mch-Chr2:13950534 Mch9g0172 Mch-Chr9:1300301 1.82E-90 transposed
Mch2g1641 Mch-Chr2:13950534 Mch5g0733 Mch-Chr5:4939153 1.18E-90 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g1641 - - - 0.0