Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g1704 ATGGCGAAATCCCCAGAAAACGAACACCCACACAAGGCCTTCGGCTGGGCTGCCCGAGATCCCTCCGGCGTACTCTCCCCCTTCCATTTCTCTCGACGGGAAAATGGTGATGATGATGTCAGTATCAAAGTCCTTTACTGTGGGGTTTGCCATTCTGATCTTCATTTGCTCAAGAATGATTGGGGTATCACTAGTTATCCTATAGTCCCAGGGCATGAGATTGTTGGTGTTGTGACTTCTGTTGGGAAAAATGTGAAGAAATTCAAAGCGGGCGATCAAGTCGGGGTTGGTGTCATAGTTGGATCTTGCAGGAGCTGTGAAAGTTGTGAGCAGGAATTGGAGAATTACTGCCCCAAGATGATATATACTTACAACTCACATTCATTTGATGGAGCAAAGACTTATGGTGGCTATTCTGATAAGATCGTTGTTGATCAACATTTTGTTCTCCGATTTCCTGACAACTTACCCCTTGACGCTGGGGCTCCGCTTCTATGCGCTGGAATCACAATTTATAGCCCAATGAAATACTATGGAATGACTGAATCTGGTAAGCATTTGGGCGTGGTTGGACTCGGCGGGCTCGGTCACGTGGCTGTTAAGTTAGGTAAGGCATTTGGGTTGAAAGTAACGGTCATCAGCACATCTCCAAGAAAGAAGGAGGAAGCAATAGACAGACTTGGTGCTGATTCCTTCCTTGTTTCAAGTGATGCTGAACAGATGAAGGCCGCCATGGGAACTATTGATTACATAATCGACACGGTATCTGCAGTTCATGCCCTTGCTCCATTGCTTGGTCTGCTAAAGCTCAATGGAAAATTGGTCACTGTGGGTTTGCCTAACAAGCCGCTGGAGCTGCCGATCCCTTCTCTAGTTCTCGGTAGGAGGATGGTTGGTGGAAGCAACTTTGGAGGTCCGAAAGAGACACAAGAGATGCTGGATTTCTGTGCGAAGCACAATATTACAGCAGATATTGAGCTGATTCAGATGGACGACATTAACACGGCCATCGAAAGGCTTGTGAAATCTGACGTTAAATATCGGTTCGTGATCGACATTGGAAACTCCTTGAAGAAGTAG 1080 46.39 MAKSPENEHPHKAFGWAARDPSGVLSPFHFSRRENGDDDVSIKVLYCGVCHSDLHLLKNDWGITSYPIVPGHEIVGVVTSVGKNVKKFKAGDQVGVGVIVGSCRSCESCEQELENYCPKMIYTYNSHSFDGAKTYGGYSDKIVVDQHFVLRFPDNLPLDAGAPLLCAGITIYSPMKYYGMTESGKHLGVVGLGGLGHVAVKLGKAFGLKVTVISTSPRKKEEAIDRLGADSFLVSSDAEQMKAAMGTIDYIIDTVSAVHALAPLLGLLKLNGKLVTVGLPNKPLELPIPSLVLGRRMVGGSNFGGPKETQEMLDFCAKHNITADIELIQMDDINTAIERLVKSDVKYRFVIDIGNSLKK 359
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 15623953 15627165 + MC02g1335 Mch2g1704 682626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g1704 359 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
Mch2g1704 359 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 321 IPR036291 -
Mch2g1704 359 Pfam Alcohol dehydrogenase GroES-like domain 36 154 IPR013154 -
Mch2g1704 359 SUPERFAMILY GroES-like 19 185 IPR011032 -
Mch2g1704 359 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270(InterPro)|GO:0016491(InterPro)
Mch2g1704 359 FunFam Cinnamyl alcohol dehydrogenase 167 323 - -
Mch2g1704 359 CDD CAD1 14 352 IPR047109 GO:0016616(InterPro)
Mch2g1704 359 Gene3D - 16 353 - -
Mch2g1704 359 PANTHER ALDEHYDE REDUCTASE 5 356 IPR047109 GO:0009809(PANTHER)|GO:0016616(InterPro)|GO:0016616(PANTHER)|GO:0045551(PANTHER)
Mch2g1704 359 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491(InterPro)
Mch2g1704 359 Gene3D - 167 323 - -
Mch2g1704 359 FunFam probable cinnamyl alcohol dehydrogenase 16 176 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0098 Mch-Chr11:637420 Mch2g1704 Mch-Chr2:15623953 2.80E-152 dispersed
Mch1g1362 Mch-Chr1:15570869 Mch2g1704 Mch-Chr2:15623953 6.61E-169 dispersed
Mch2g1704 Mch-Chr2:15623953 Mch4g0736 Mch-Chr4:4997541 3.09E-130 dispersed
Mch2g1704 Mch-Chr2:15623953 Mch10g0473 Mch-Chr10:3081271 5.63E-134 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g1704 K00083 - csv:101205228 580.482