Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g1886 ATGTTGAAAGAGAAGACTTTTTGTCTCGTCGTTTTTGTTCTTCTCTTTGTCATAGGATATGTTGCTGCCGTTGAAAACGACGAGGACAAGAACCATTTCATTGTTTTTCTAAGCAACAATGAACCTGTTTTAAATAAAAACGATGCAGTAGAAACACATCTCAATGTTCTTACGTCAGTGAAAGAAAGCCATGCTGATGCCAAAGACTCAATGGTCCACAGCTACACAAAAAGTTTCAATGCCTTTGCTGCGAAGCTTAGTAAAGAGGAAGCGGAAACATTATCGAAGAGGGGAGAAGTGCATTCTGTGATCCCAAACACATATAGAAAGCTACAGACAACAAGATCATGGGACTTCGTTGGGTTTCCTCCCAATGTAAGAAGACATCCCAAAAAAGAGAATGATATTATTGTAGGTTTATTTGATACTGGGATCACCCCAACGGCGGAGAGTTTCAAAGATACTGGGTTTGGTCCTCCACCCATGAAATGGAAAGGCACTTGTCAACACTTTGCCAATTTCTCTGGCTGCAACAACAAGCTGGTCGGAGCAAGATATTTCAAGCTCGATGGCACCCCTGATCCCATCGACATCTTATCGCCAGTAGACGTCAGCGGCCATGGGACGCACACCGCCTCAACTGCCGCCGGCAATGCAGTTCCTGGCGCTAGCCTCTTCGGGTTGGCCCAAGGAACTGCACGCGGCGCTGTGCCATCCAGCAGAATCGCCATGTACAAGGTTTGTTGGACCACCACTGGATGTTCCGATATGGACATTCTGGCCGCCTTCGACGCAGCAATACAGGACGGCGTCGATATCATCTCGATATCGATTGCCGGCGGGGGCTTCAACAATTACACCGAGGATGCTATCTCTATCGGAGCATTTCATGCCATGAAGAAGGGCATTCTCACCGTGACATCCGCCGGCAACACCGGCCCATCTGCCGGCAGCATTGTTAACCACGCGCCGTGGATCCTTACTGTGGCAGCCAGTGCGATTGATAGAAAATTTACCACCAAAGCCGAGTTGGGCAACGGGAATAACATTTCTGGCATAGGAATAAACACATTCAATCCAAGGCAGAAAATGTACCCATTAGTGGATGGAGGTGATGCGGCGAGGAGCATAGATAGCCGAGACAGTGCAAGCTTTTGTGCAGATGGCTCACTTGATCCGGCAAAGGTCAAAGGAAGGCTTGTGTTTTGCAAAATGATGACTCCGGGCTCTGATTCTGTTGTCAAATCACTTGGAGCTGACGGCACTATCATTCAAACCGATCAGTTTATTGACCGTGACCCAATCTTCATGGCCTCGGCCACCATGGTTAGTGGCTTTGTTGGTGCTTCTATTGAAAGCTATATCAAGTCCACAAGGACACCAAGGGCAGTGATATACAAAACAAGTGAAATGAAAGCAAGAGCTCCATTCGTGGCTGCATTCTCGGCCAGAGGCCCAAACCCAGGCTCCAACCGCATTCTGAAGCCGGACATTGCAGCGCCAGGAGTAGACATATTGGCGGCCTACACGCCACTGAAGTCGCTGACGGGGCTGAAAGGGGACACCCAATTCTCCAAATTCACGCTCATGTCGGGCACTTCCATGGCCTGCCCCCATGCCGCCGGAGCCGCCGCCTATGTAAAGTCTTTCCACCCCAATTGGTCTCCGGCAGCAATTAGATCCGCCCTCATCACCACCGCGAGACCTATCAACCGGCGAATGAACGCGGAAGGGGAATTTGCGTACGGCGCTGGAAACATAAATCCATCGAGGGCAAAAAATCCAGGCCTAGTCTACGACGACCACGAGATTTCGTATATCAAGTTCCTCTGCAGCGAAGGCTATACTGCATCTTCAATCGCCGTTCTCGCCGGATCCAATCCCATAAATTGCCCCTCCCTAACGCGAGGACTCGGCCACGACTCGCTCAACTACCCAACGATTCAACTCAGTGTTCGAGGAACTCGACGCCCTACCGTGGCTGTGTTCCAGCGCCAAGTCACCAACGTTGGTCGTGCCGTCTCCTTCTACAACGCAACTGTCGTGGCTCCCCAAGGGGTGGAGGTCACGGTGGCTCCGACCACTCTCTCATTCACGCAGCTTCTGCAGAAACGCACGTTCAAGGTCATTGTGAAGGCAAGTCCGTTGCCACCGGCGAAAATGGTGTCTGGATGGCTGACTTGGAAAACTGTCGGCCATGTTGTCAGAAGCCCGGTCGTTGTTTACAGCCCATCCCAGTAA 2241 50.78 MLKEKTFCLVVFVLLFVIGYVAAVENDEDKNHFIVFLSNNEPVLNKNDAVETHLNVLTSVKESHADAKDSMVHSYTKSFNAFAAKLSKEEAETLSKRGEVHSVIPNTYRKLQTTRSWDFVGFPPNVRRHPKKENDIIVGLFDTGITPTAESFKDTGFGPPPMKWKGTCQHFANFSGCNNKLVGARYFKLDGTPDPIDILSPVDVSGHGTHTASTAAGNAVPGASLFGLAQGTARGAVPSSRIAMYKVCWTTTGCSDMDILAAFDAAIQDGVDIISISIAGGGFNNYTEDAISIGAFHAMKKGILTVTSAGNTGPSAGSIVNHAPWILTVAASAIDRKFTTKAELGNGNNISGIGINTFNPRQKMYPLVDGGDAARSIDSRDSASFCADGSLDPAKVKGRLVFCKMMTPGSDSVVKSLGADGTIIQTDQFIDRDPIFMASATMVSGFVGASIESYIKSTRTPRAVIYKTSEMKARAPFVAAFSARGPNPGSNRILKPDIAAPGVDILAAYTPLKSLTGLKGDTQFSKFTLMSGTSMACPHAAGAAAYVKSFHPNWSPAAIRSALITTARPINRRMNAEGEFAYGAGNINPSRAKNPGLVYDDHEISYIKFLCSEGYTASSIAVLAGSNPINCPSLTRGLGHDSLNYPTIQLSVRGTRRPTVAVFQRQVTNVGRAVSFYNATVVAPQGVEVTVAPTTLSFTQLLQKRTFKVIVKASPLPPAKMVSGWLTWKTVGHVVRSPVVVYSPSQ 746
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 19008281 19018819 + MC02g1427 Mch2g1886 682808

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g1886 746 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 58 740 IPR045051 -
Mch2g1886 746 ProSiteProfiles Serine proteases, subtilase domain profile. 116 593 - -
Mch2g1886 746 Pfam Subtilase family 134 585 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Mch2g1886 746 Gene3D - 335 471 - -
Mch2g1886 746 SUPERFAMILY Subtilisin-like 111 597 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Mch2g1886 746 ProSitePatterns Serine proteases, subtilase family, serine active site. 532 542 IPR023828 -
Mch2g1886 746 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 112 IPR037045 -
Mch2g1886 746 Pfam Peptidase inhibitor I9 33 112 IPR010259 -
Mch2g1886 746 PRINTS Subtilisin serine protease family (S8) signature 531 547 IPR015500 -
Mch2g1886 746 PRINTS Subtilisin serine protease family (S8) signature 133 152 IPR015500 -
Mch2g1886 746 PRINTS Subtilisin serine protease family (S8) signature 203 216 IPR015500 -
Mch2g1886 746 Pfam Fibronectin type-III domain 643 741 IPR041469 -
Mch2g1886 746 CDD Peptidases_S8_3 110 567 IPR034197 -
Mch2g1886 746 FunFam Subtilisin-like protease SBT1.5 135 349 - -
Mch2g1886 746 CDD PA_subtilisin_like 344 465 - -
Mch2g1886 746 Gene3D - 610 744 - -
Mch2g1886 746 Gene3D Peptidase S8/S53 domain 135 603 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g1886 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g1886 Mch-Chr2:19008281 Mch9g1268 Mch-Chr9:14565197 0 dispersed
Mch2g1886 Mch-Chr2:19008281 Mch1g0911 Mch-Chr1:12431655 1.12E-223 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Mch9g1269 . 25 769 Subtilisin-like Serine Gene Family AT1G01900 55.7 3.8e-231 798.1
Mch6g2849 . 9 767 Subtilisin-like Serine Gene Family AT1G04110 66.6 1.2e-306 1048.9
Mch11g0100 . 17 770 Subtilisin-like Serine Gene Family AT1G20150 53.9 3.6e-229 791.6
Mch11g0100 . 1 512 Subtilisin-like Serine Gene Family AT1G20160 60.2 4.5e-170 594.7
Mch1g2127 . 9 837 Subtilisin-like Serine Gene Family AT1G30600 65.6 3.7e-314 1073.9
Mch10g0026 . 64 775 Subtilisin-like Serine Gene Family AT1G32940 53.7 2.0e-218 755.7
Mch10g0820 . 47 753 Subtilisin-like Serine Gene Family AT1G32940 52.4 4.4e-213 738.0
Mch10g0815 . 672 1397 Subtilisin-like Serine Gene Family AT1G32940 51.4 4.2e-200 694.9
Mch10g0818 . 1 210 Subtilisin-like Serine Gene Family AT1G32940 51.4 1.9e-54 211.1
Mch10g0026 . 64 775 Subtilisin-like Serine Gene Family AT1G32950 54.4 1.1e-216 750.0
Mch10g0820 . 47 753 Subtilisin-like Serine Gene Family AT1G32950 52.4 4.1e-211 731.5
Mch10g0815 . 672 1397 Subtilisin-like Serine Gene Family AT1G32950 52.0 4.8e-204 708.0
Mch10g0818 . 1 210 Subtilisin-like Serine Gene Family AT1G32950 51.4 3.2e-54 210.3
Mch10g0817 . 1 130 Subtilisin-like Serine Gene Family AT1G32950 57.4 3.0e-36 150.6
Mch10g0026 . 8 775 Subtilisin-like Serine Gene Family AT1G32960 54.3 6.9e-233 803.9
Mch10g0820 . 8 753 Subtilisin-like Serine Gene Family AT1G32960 52.0 3.7e-218 755.0
Mch10g0815 . 649 1397 Subtilisin-like Serine Gene Family AT1G32960 51.7 4.8e-210 728.0
Mch10g0818 . 1 210 Subtilisin-like Serine Gene Family AT1G32960 52.4 2.0e-54 211.1
Mch10g0818 . 1 210 Subtilisin-like Serine Gene Family AT1G32970 52.9 4.5e-56 216.5
Mch3g0802 . 25 812 Subtilisin-like Serine Gene Family AT1G62340 57.9 1.1e-260 896.3
Mch10g0026 . 41 773 Subtilisin-like Serine Gene Family AT1G66220 50.1 1.7e-204 709.5
Mch10g0818 . 1 210 Subtilisin-like Serine Gene Family AT1G66220 50.5 2.7e-56 217.2
Mch10g0818 . 1 210 Subtilisin-like Serine Gene Family AT1G66210 51.7 2.2e-53 207.6
Mch4g0363 . 50 786 Subtilisin-like Serine Gene Family AT2G04160 64.7 1.5e-288 988.8
Mch3g0704 . 24 763 Subtilisin-like Serine Gene Family AT2G04160 53.1 9.1e-217 750.4
Mch3g0715 . 5 255 Subtilisin-like Serine Gene Family AT2G04160 53.5 4.9e-69 259.6
Mch6g0980 . 23 764 Subtilisin-like Serine Gene Family AT2G05920 73.6 0.0e+00 1101.3
Mch1g1263 . 22 758 Subtilisin-like Serine Gene Family AT2G05920 56.3 1.5e-232 802.7
Mch8g0642 . 26 760 Subtilisin-like Serine Gene Family AT2G05920 56.2 1.0e-220 763.5
Mch10g0213 . 54 800 Subtilisin-like Serine Gene Family AT2G05920 52.3 5.2e-217 751.1
Mch9g0211 . 1 734 Subtilisin-like Serine Gene Family AT2G05920 53.6 3.5e-213 738.4
Mch2g0997 . 7 740 Subtilisin-like Serine Gene Family AT2G05920 51.4 6.8e-209 724.2
Mch9g0180 . 30 786 Subtilisin-like Serine Gene Family AT2G05920 50.9 1.2e-202 703.4
Mch8g2621 . 15 817 Subtilisin-like Serine Gene Family AT2G19170 82.0 0.0e+00 1343.2
Mch9g0211 . 2 734 Subtilisin-like Serine Gene Family AT3G14067 65.8 1.9e-283 971.8
Mch1g1263 . 4 758 Subtilisin-like Serine Gene Family AT3G14067 53.1 5.0e-223 771.2
Mch6g0980 . 22 760 Subtilisin-like Serine Gene Family AT3G14067 54.5 3.2e-222 768.5
Mch8g0642 . 27 758 Subtilisin-like Serine Gene Family AT3G14067 51.9 2.8e-210 728.8
Mch9g0180 . 33 794 Subtilisin-like Serine Gene Family AT3G14240 76.3 0.0e+00 1192.9
Mch2g0997 . 8 748 Subtilisin-like Serine Gene Family AT3G14240 58.8 5.5e-246 847.4
Mch1g1263 . 24 754 Subtilisin-like Serine Gene Family AT3G14240 52.7 2.0e-219 759.2
Mch10g0213 . 55 796 Subtilisin-like Serine Gene Family AT3G14240 50.5 4.0e-212 734.9
Mch6g0980 . 26 756 Subtilisin-like Serine Gene Family AT3G14240 51.8 2.0e-208 722.6
Mch9g0211 . 3 733 Subtilisin-like Serine Gene Family AT3G14240 50.5 2.7e-205 712.2
Mch9g1525 . 16 690 Subtilisin-like Serine Gene Family AT3G46840 51.1 2.1e-178 622.9
Mch9g1525 . 16 690 Subtilisin-like Serine Gene Family AT3G46850 50.1 1.5e-176 616.7
Mch9g1268 . 9 569 Subtilisin-like Serine Gene Family AT4G00230 60.1 2.0e-192 669.1
Mch2g1886 . 1 568 Subtilisin-like Serine Gene Family AT4G00230 57.2 1.6e-189 659.4
Mch2g1906 . 1 507 Subtilisin-like Serine Gene Family AT4G00230 60.6 1.6e-176 616.3
Mch2g1934 . 2 444 Subtilisin-like Serine Gene Family AT4G00230 59.6 1.1e-148 523.9
Mch9g1525 . 18 529 Subtilisin-like Serine Gene Family AT4G00230 50.4 9.6e-142 500.7
Mch5g1630 . 1 489 Subtilisin-like Serine Gene Family AT4G00230 51.7 2.1e-136 483.0
Mch10g0026 . 64 775 Subtilisin-like Serine Gene Family AT4G10510 54.7 7.4e-221 763.8
Mch10g0820 . 47 748 Subtilisin-like Serine Gene Family AT4G10510 52.0 1.3e-212 736.5
Mch10g0815 . 672 1397 Subtilisin-like Serine Gene Family AT4G10510 50.8 1.5e-202 703.0
Mch10g0818 . 1 210 Subtilisin-like Serine Gene Family AT4G10510 53.8 1.0e-57 221.9
Mch10g0026 . 37 775 Subtilisin-like Serine Gene Family AT4G10520 57.0 3.0e-233 805.1
Mch10g0820 . 34 753 Subtilisin-like Serine Gene Family AT4G10520 52.0 3.3e-211 731.9
Mch10g0815 . 649 1397 Subtilisin-like Serine Gene Family AT4G10520 51.9 4.1e-206 714.9
Mch10g0818 . 1 210 Subtilisin-like Serine Gene Family AT4G10520 51.0 1.8e-52 204.5
Mch10g0026 . 37 775 Subtilisin-like Serine Gene Family AT4G10530 55.7 4.5e-221 764.6
Mch10g0820 . 34 753 Subtilisin-like Serine Gene Family AT4G10530 50.1 1.1e-198 690.3
Mch10g0818 . 1 210 Subtilisin-like Serine Gene Family AT4G10530 51.4 1.4e-52 204.9
Mch10g0026 . 24 775 Subtilisin-like Serine Gene Family AT4G10540 53.4 1.6e-229 792.7
Mch10g0820 . 33 753 Subtilisin-like Serine Gene Family AT4G10540 52.4 1.5e-219 759.6
Mch10g0815 . 640 1397 Subtilisin-like Serine Gene Family AT4G10540 52.2 4.5e-216 748.0
Mch10g0818 . 1 210 Subtilisin-like Serine Gene Family AT4G10540 54.3 2.3e-58 224.2
Mch10g0026 . 64 775 Subtilisin-like Serine Gene Family AT4G10550 54.1 3.3e-221 765.0
Mch10g0820 . 47 753 Subtilisin-like Serine Gene Family AT4G10550 52.0 1.7e-212 736.1
Mch10g0815 . 672 1397 Subtilisin-like Serine Gene Family AT4G10550 51.0 1.2e-202 703.4
Mch10g0818 . 1 210 Subtilisin-like Serine Gene Family AT4G10550 54.3 2.8e-58 223.8
Mch1g2127 . 9 837 Subtilisin-like Serine Gene Family AT4G20430 69.0 0.0e+00 1142.5
Mch3g1200 . 1 284 Subtilisin-like Serine Gene Family AT4G21320 76.5 2.2e-131 465.3
Mch10g0026 . 36 775 Subtilisin-like Serine Gene Family AT4G21630 52.7 3.3e-211 731.9
Mch10g0818 . 1 210 Subtilisin-like Serine Gene Family AT4G21630 51.2 3.0e-55 213.8
Mch10g0026 . 36 775 Subtilisin-like Serine Gene Family AT4G21640 51.1 1.5e-200 696.4
Mch10g0820 . 29 745 Subtilisin-like Serine Gene Family AT4G21640 50.3 3.2e-195 678.7
Mch10g0818 . 1 210 Subtilisin-like Serine Gene Family AT4G21640 51.2 3.4e-56 216.9
Mch10g0026 . 9 775 Subtilisin-like Serine Gene Family AT4G21650 50.5 6.7e-212 734.2
Mch10g0820 . 29 748 Subtilisin-like Serine Gene Family AT4G21650 51.5 2.6e-200 695.7
Mch10g0815 . 649 1397 Subtilisin-like Serine Gene Family AT4G21650 50.5 4.5e-200 694.9
Mch10g0818 . 1 210 Subtilisin-like Serine Gene Family AT4G21650 53.1 8.5e-58 222.2
Mch2g0012 . 1 713 Subtilisin-like Serine Gene Family AT4G26330 58.4 5.4e-235 810.8
Mch8g2621 . 9 817 Subtilisin-like Serine Gene Family AT4G30020 80.9 0.0e+00 1330.1
Mch2g0997 . 1 748 Subtilisin-like Serine Gene Family AT4G34980 74.3 0.0e+00 1142.1
Mch9g0180 . 32 794 Subtilisin-like Serine Gene Family AT4G34980 53.6 5.1e-228 787.7
Mch1g1263 . 18 754 Subtilisin-like Serine Gene Family AT4G34980 51.9 7.9e-213 737.3
Mch10g0213 . 38 799 Subtilisin-like Serine Gene Family AT4G34980 50.5 2.1e-210 729.2
Mch6g0980 . 22 756 Subtilisin-like Serine Gene Family AT4G34980 51.0 2.2e-207 719.2
Mch1g0911 . 4 562 Subtilisin-like Serine Gene Family AT5G03620 56.4 5.1e-180 627.9
Mch5g1630 . 1 487 Subtilisin-like Serine Gene Family AT5G03620 60.6 1.3e-175 613.2
Mch2g1886 . 11 566 Subtilisin-like Serine Gene Family AT5G03620 50.4 1.9e-142 503.1
Mch9g1525 . 8 528 Subtilisin-like Serine Gene Family AT5G03620 51.7 1.6e-141 500.0
Mch2g1906 . 5 505 Subtilisin-like Serine Gene Family AT5G03620 52.4 5.5e-134 474.9
Mch2g1934 . 2 429 Subtilisin-like Serine Gene Family AT5G03620 52.1 4.1e-113 405.6
Mch6g0808 . 291 1050 Subtilisin-like Serine Gene Family AT5G19660 79.2 0.0e+00 1263.4
Mch1g2127 . 33 611 Subtilisin-like Serine Gene Family AT5G44530 70.0 2.7e-243 838.2
Mch1g1978 . 109 814 Subtilisin-like Serine Gene Family AT5G45640 50.9 5.4e-190 661.4
Mch1g1978 . 60 817 Subtilisin-like Serine Gene Family AT5G45650 56.6 7.5e-243 837.0
Mch10g0213 . 54 798 Subtilisin-like Serine Gene Family AT5G51750 73.4 0.0e+00 1149.0
Mch1g1263 . 10 758 Subtilisin-like Serine Gene Family AT5G51750 51.8 2.3e-228 788.9
Mch8g0642 . 4 760 Subtilisin-like Serine Gene Family AT5G51750 51.9 2.1e-221 765.8
Mch6g0980 . 21 760 Subtilisin-like Serine Gene Family AT5G51750 51.7 3.4e-219 758.4
Mch2g0997 . 4 748 Subtilisin-like Serine Gene Family AT5G51750 50.2 2.1e-205 712.6
Mch9g1525 . 16 529 Subtilisin-like Serine Gene Family AT5G58840 50.1 2.5e-136 482.6
Mch9g1525 . 16 690 Subtilisin-like Serine Gene Family AT5G59190 50.5 2.0e-183 639.4
Mch4g0363 . 34 786 Subtilisin-like Serine Gene Family AT5G59810 59.8 7.1e-262 900.2
Mch3g0704 . 11 767 Subtilisin-like Serine Gene Family AT5G59810 58.0 1.4e-246 849.4
Mch3g0715 . 6 256 Subtilisin-like Serine Gene Family AT5G59810 57.7 3.3e-81 300.1
Mch1g1263 . 5 758 Subtilisin-like Serine Gene Family AT5G67360 71.8 0.0e+00 1100.1
Mch8g0642 . 5 760 Subtilisin-like Serine Gene Family AT5G67360 64.9 1.6e-287 985.3
Mch6g0980 . 26 761 Subtilisin-like Serine Gene Family AT5G67360 57.0 5.2e-233 804.3
Mch10g0213 . 35 797 Subtilisin-like Serine Gene Family AT5G67360 53.9 5.4e-230 794.3
Mch9g0211 . 1 734 Subtilisin-like Serine Gene Family AT5G67360 56.1 4.1e-222 768.1
Mch2g0997 . 1 743 Subtilisin-like Serine Gene Family AT5G67360 52.1 2.5e-211 732.3
Mch9g0180 . 26 789 Subtilisin-like Serine Gene Family AT5G67360 51.0 1.4e-209 726.5
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002819 1 2 1 0 0 2 2 2 2 1 2 2 2 2 2 1 2 1 1 2 2 0 5 2 1 3 4 2 1 1 51