Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g1886 ATGTTGAAAGAGAAGACTTTTTGTCTCGTCGTTTTTGTTCTTCTCTTTGTCATAGGATATGTTGCTGCCGTTGAAAACGACGAGGACAAGAACCATTTCATTGTTTTTCTAAGCAACAATGAACCTGTTTTAAATAAAAACGATGCAGTAGAAACACATCTCAATGTTCTTACGTCAGTGAAAGAAAGCCATGCTGATGCCAAAGACTCAATGGTCCACAGCTACACAAAAAGTTTCAATGCCTTTGCTGCGAAGCTTAGTAAAGAGGAAGCGGAAACATTATCGAAGAGGGGAGAAGTGCATTCTGTGATCCCAAACACATATAGAAAGCTACAGACAACAAGATCATGGGACTTCGTTGGGTTTCCTCCCAATGTAAGAAGACATCCCAAAAAAGAGAATGATATTATTGTAGGTTTATTTGATACTGGGATCACCCCAACGGCGGAGAGTTTCAAAGATACTGGGTTTGGTCCTCCACCCATGAAATGGAAAGGCACTTGTCAACACTTTGCCAATTTCTCTGGCTGCAACAACAAGCTGGTCGGAGCAAGATATTTCAAGCTCGATGGCACCCCTGATCCCATCGACATCTTATCGCCAGTAGACGTCAGCGGCCATGGGACGCACACCGCCTCAACTGCCGCCGGCAATGCAGTTCCTGGCGCTAGCCTCTTCGGGTTGGCCCAAGGAACTGCACGCGGCGCTGTGCCATCCAGCAGAATCGCCATGTACAAGGTTTGTTGGACCACCACTGGATGTTCCGATATGGACATTCTGGCCGCCTTCGACGCAGCAATACAGGACGGCGTCGATATCATCTCGATATCGATTGCCGGCGGGGGCTTCAACAATTACACCGAGGATGCTATCTCTATCGGAGCATTTCATGCCATGAAGAAGGGCATTCTCACCGTGACATCCGCCGGCAACACCGGCCCATCTGCCGGCAGCATTGTTAACCACGCGCCGTGGATCCTTACTGTGGCAGCCAGTGCGATTGATAGAAAATTTACCACCAAAGCCGAGTTGGGCAACGGGAATAACATTTCTGGCATAGGAATAAACACATTCAATCCAAGGCAGAAAATGTACCCATTAGTGGATGGAGGTGATGCGGCGAGGAGCATAGATAGCCGAGACAGTGCAAGCTTTTGTGCAGATGGCTCACTTGATCCGGCAAAGGTCAAAGGAAGGCTTGTGTTTTGCAAAATGATGACTCCGGGCTCTGATTCTGTTGTCAAATCACTTGGAGCTGACGGCACTATCATTCAAACCGATCAGTTTATTGACCGTGACCCAATCTTCATGGCCTCGGCCACCATGGTTAGTGGCTTTGTTGGTGCTTCTATTGAAAGCTATATCAAGTCCACAAGGACACCAAGGGCAGTGATATACAAAACAAGTGAAATGAAAGCAAGAGCTCCATTCGTGGCTGCATTCTCGGCCAGAGGCCCAAACCCAGGCTCCAACCGCATTCTGAAGCCGGACATTGCAGCGCCAGGAGTAGACATATTGGCGGCCTACACGCCACTGAAGTCGCTGACGGGGCTGAAAGGGGACACCCAATTCTCCAAATTCACGCTCATGTCGGGCACTTCCATGGCCTGCCCCCATGCCGCCGGAGCCGCCGCCTATGTAAAGTCTTTCCACCCCAATTGGTCTCCGGCAGCAATTAGATCCGCCCTCATCACCACCGCGAGACCTATCAACCGGCGAATGAACGCGGAAGGGGAATTTGCGTACGGCGCTGGAAACATAAATCCATCGAGGGCAAAAAATCCAGGCCTAGTCTACGACGACCACGAGATTTCGTATATCAAGTTCCTCTGCAGCGAAGGCTATACTGCATCTTCAATCGCCGTTCTCGCCGGATCCAATCCCATAAATTGCCCCTCCCTAACGCGAGGACTCGGCCACGACTCGCTCAACTACCCAACGATTCAACTCAGTGTTCGAGGAACTCGACGCCCTACCGTGGCTGTGTTCCAGCGCCAAGTCACCAACGTTGGTCGTGCCGTCTCCTTCTACAACGCAACTGTCGTGGCTCCCCAAGGGGTGGAGGTCACGGTGGCTCCGACCACTCTCTCATTCACGCAGCTTCTGCAGAAACGCACGTTCAAGGTCATTGTGAAGGCAAGTCCGTTGCCACCGGCGAAAATGGTGTCTGGATGGCTGACTTGGAAAACTGTCGGCCATGTTGTCAGAAGCCCGGTCGTTGTTTACAGCCCATCCCAGTAA 2241 50.78 MLKEKTFCLVVFVLLFVIGYVAAVENDEDKNHFIVFLSNNEPVLNKNDAVETHLNVLTSVKESHADAKDSMVHSYTKSFNAFAAKLSKEEAETLSKRGEVHSVIPNTYRKLQTTRSWDFVGFPPNVRRHPKKENDIIVGLFDTGITPTAESFKDTGFGPPPMKWKGTCQHFANFSGCNNKLVGARYFKLDGTPDPIDILSPVDVSGHGTHTASTAAGNAVPGASLFGLAQGTARGAVPSSRIAMYKVCWTTTGCSDMDILAAFDAAIQDGVDIISISIAGGGFNNYTEDAISIGAFHAMKKGILTVTSAGNTGPSAGSIVNHAPWILTVAASAIDRKFTTKAELGNGNNISGIGINTFNPRQKMYPLVDGGDAARSIDSRDSASFCADGSLDPAKVKGRLVFCKMMTPGSDSVVKSLGADGTIIQTDQFIDRDPIFMASATMVSGFVGASIESYIKSTRTPRAVIYKTSEMKARAPFVAAFSARGPNPGSNRILKPDIAAPGVDILAAYTPLKSLTGLKGDTQFSKFTLMSGTSMACPHAAGAAAYVKSFHPNWSPAAIRSALITTARPINRRMNAEGEFAYGAGNINPSRAKNPGLVYDDHEISYIKFLCSEGYTASSIAVLAGSNPINCPSLTRGLGHDSLNYPTIQLSVRGTRRPTVAVFQRQVTNVGRAVSFYNATVVAPQGVEVTVAPTTLSFTQLLQKRTFKVIVKASPLPPAKMVSGWLTWKTVGHVVRSPVVVYSPSQ 746
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 19008281 19018819 + MC02g1427 Mch2g1886 682808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g1886 746 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 58 740 IPR045051 -
Mch2g1886 746 ProSiteProfiles Serine proteases, subtilase domain profile. 116 593 - -
Mch2g1886 746 Pfam Subtilase family 134 585 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Mch2g1886 746 Gene3D - 335 471 - -
Mch2g1886 746 SUPERFAMILY Subtilisin-like 111 597 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Mch2g1886 746 ProSitePatterns Serine proteases, subtilase family, serine active site. 532 542 IPR023828 -
Mch2g1886 746 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 112 IPR037045 -
Mch2g1886 746 Pfam Peptidase inhibitor I9 33 112 IPR010259 -
Mch2g1886 746 PRINTS Subtilisin serine protease family (S8) signature 531 547 IPR015500 -
Mch2g1886 746 PRINTS Subtilisin serine protease family (S8) signature 133 152 IPR015500 -
Mch2g1886 746 PRINTS Subtilisin serine protease family (S8) signature 203 216 IPR015500 -
Mch2g1886 746 Pfam Fibronectin type-III domain 643 741 IPR041469 -
Mch2g1886 746 CDD Peptidases_S8_3 110 567 IPR034197 -
Mch2g1886 746 FunFam Subtilisin-like protease SBT1.5 135 349 - -
Mch2g1886 746 CDD PA_subtilisin_like 344 465 - -
Mch2g1886 746 Gene3D - 610 744 - -
Mch2g1886 746 Gene3D Peptidase S8/S53 domain 135 603 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g1886 Mch-Chr2:19008281 Mch9g1268 Mch-Chr9:14565197 0 dispersed
Mch2g1886 Mch-Chr2:19008281 Mch1g0911 Mch-Chr1:12431655 1.12E-223 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g1886 - - - 0.0