Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g1906 AGCCATGTCGATGCAAAGGAATCAATGGTCCACAGCTACACAAAAAGCCTCAATGCCTTTGCTGCCTCGCTTACCGGAGAGGAAGCCCAAAAACTAGCAAAGATGGGAGAAGTGCATTCAGTGATCCCAAACACATATAGAAAGCTACAGACAACAAGATCATGGGACTTCATTGGGTTGCCTTCCAATGCAACAAGACATCCCCAACACGAGAGTAATATTATTGTGGGTGTATTTGATACTGGGATCACTCCAACGGCGGAGAGCTTCAAAGATAATGGATTTGGTCCTCCACCAAAAAAATGGAAAGGCACTTGTCAACACTTTGCAAATTTCTCTGGCTGCAACAACAAGCTGATCGGAGCAAGATATTTCAAGCTAGACAAGATCCACGATCCCATCGACATCTTATCACCGGTAGACGTTAACGGCCACGGTACGCACACGGCCTCAACAGCGGCAGGCAATGCAGTTCCTGGCGCCAACCTGTTCGGGCTAGCCGAAGGAACAGCACGTGGTGCCGTGCCCTCGGCCAGAATCGCCATATACAAAGTCTGCTGGGCCAGCAGGGGGTGCGCTGATATGGATATGCTGGCTGCCTTCGATGCAGCCATACGTGATGGTGTCCATATCATCTCGGTATCGGTTGGTGAAGGTGGCTTTGGCAATTACGCTGAGGACGCTGTCTCCATTGGCGCGTTTCATGCCATGAAGAACGGCATTGTCACCGTGGCTGCTGCGGGCAACAACGGCCCGGCCACGGGCAGCGTTATCAACCACGCGCCGTGGATCTTAACGGTAGGAGCCAGTTGGACCGATAGAACATTTACCAGCAGAGTGGAGTTGGGCAATGGGAAGAGCATCTCTGGGATGGGAATAAACACATTCAACCCGAGGCAAAAAATGTTCCCTCTAGTGGACGGAGCGGATGTGGCGAGTAACAACCCACAAGCCAGAGGCGGCGCGAGCATTTGCGCAGAGGGCTCACTTGATCCAGCAAAGGTGAAAGGGCACCTTGTGTTGTGCAGAATGATCACTTGGGGCTCTGATTCTGTGGTCAAATCAGCTGGTGCTGATGGAACCATTCTTCAAAGTGATCAGTTTCTTGACCATCCTCATCTCTACATGACCTCAGCCACCATGGTTAGTACTTCTGATGGTGCTTCTATTGACGCCTATATCAGGTCCACAAGGACACCAACGGCAGTGATATACAAATCTACTGAAGTGAAAACACCAGCTCCACTGGTGGCTTCCTTCTCATCCAGAGGCCCAAACCCAGGCTCCACCCGAATTCTAAAGCCCGACATTGTAGCTCCAGGAGTGAACATATTGGCCACGTTCACGCCCCTGAAGTCTCTTACGGGTCTGAAGGGAGACACCCAATTCTCCAAATTCACGATCGAGTCCGGCACTTCCATGGCGTGCCCTCACGCCGCCGGAGCGGCAGCCTATGTAAAGTCTTTCCACCCCGATTGGTCTCCTGCCGCCATTAGATCCGCCCTCATCACCACTGCGACGCCGATCAGTCGACGAATGAACGCAGAAGGAGAATTCGCATACGGTGCTGGAAACCTAAATCCAGAAAGGGCAGTAAATCCAGGCCTAATCTACGATGACGACGAGATGTCCTACGTTAAACTCCTCTGCAGCGAACGGTACAGCCAATCGTCAATTGCCACCCTCACTGGACCCAAGCCCGTAAACTGCGCATCTCTAATGCATGGACTTAGCCACGACTCGCTCAACTATCCAACCATTCAACTTAGTCTCCAAAACACTCGAACCACGACGGTTGCTGAGTTCCAGCGGCAAGTTACCAATGTCGGCCATGCCGTCTCCGTCTACCACGCCATTGTCAGCGCTCCCCCCGGGGTGGAGATCACGGTGTCTCCGACGACTCTGTCCTTCACGCACGTGCTGCAGAAACTTACGTTCAAGGTCGTTGTGGAGGCGGGACCGTTGCCGCCGGGGAAAATGGAGTCTGGATTGCTGACTTGGAAAACTGCCGGCCACGTGGTCAGAAGCCCAATCGTTGTTTACAGTCCCTCCTCGTGA 2058 52.72 SHVDAKESMVHSYTKSLNAFAASLTGEEAQKLAKMGEVHSVIPNTYRKLQTTRSWDFIGLPSNATRHPQHESNIIVGVFDTGITPTAESFKDNGFGPPPKKWKGTCQHFANFSGCNNKLIGARYFKLDKIHDPIDILSPVDVNGHGTHTASTAAGNAVPGANLFGLAEGTARGAVPSARIAIYKVCWASRGCADMDMLAAFDAAIRDGVHIISVSVGEGGFGNYAEDAVSIGAFHAMKNGIVTVAAAGNNGPATGSVINHAPWILTVGASWTDRTFTSRVELGNGKSISGMGINTFNPRQKMFPLVDGADVASNNPQARGGASICAEGSLDPAKVKGHLVLCRMITWGSDSVVKSAGADGTILQSDQFLDHPHLYMTSATMVSTSDGASIDAYIRSTRTPTAVIYKSTEVKTPAPLVASFSSRGPNPGSTRILKPDIVAPGVNILATFTPLKSLTGLKGDTQFSKFTIESGTSMACPHAAGAAAYVKSFHPDWSPAAIRSALITTATPISRRMNAEGEFAYGAGNLNPERAVNPGLIYDDDEMSYVKLLCSERYSQSSIATLTGPKPVNCASLMHGLSHDSLNYPTIQLSLQNTRTTTVAEFQRQVTNVGHAVSVYHAIVSAPPGVEITVSPTTLSFTHVLQKLTFKVVVEAGPLPPGKMESGLLTWKTAGHVVRSPIVVYSPSS 685
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 19488256 19495951 - MC02g1435 Mch2g1906 682828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g1906 685 CDD Peptidases_S8_3 48 507 IPR034197 -
Mch2g1906 685 Pfam Subtilase family 72 524 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Mch2g1906 685 PRINTS Subtilisin serine protease family (S8) signature 470 486 IPR015500 -
Mch2g1906 685 PRINTS Subtilisin serine protease family (S8) signature 71 90 IPR015500 -
Mch2g1906 685 PRINTS Subtilisin serine protease family (S8) signature 141 154 IPR015500 -
Mch2g1906 685 FunFam Subtilisin-like protease SBT1.5 73 298 - -
Mch2g1906 685 Pfam Peptidase inhibitor I9 4 50 IPR010259 -
Mch2g1906 685 Gene3D Peptidase S8/S53 domain 73 545 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Mch2g1906 685 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 50 IPR037045 -
Mch2g1906 685 Gene3D - 273 410 - -
Mch2g1906 685 ProSiteProfiles Serine proteases, subtilase domain profile. 54 532 - -
Mch2g1906 685 CDD PA_subtilisin_like 280 404 - -
Mch2g1906 685 SUPERFAMILY Subtilisin-like 49 536 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Mch2g1906 685 Pfam Fibronectin type-III domain 582 680 IPR041469 -
Mch2g1906 685 ProSitePatterns Serine proteases, subtilase family, serine active site. 471 481 IPR023828 -
Mch2g1906 685 Gene3D - 549 683 - -
Mch2g1906 685 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 6 679 IPR045051 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g1906 Mch-Chr2:19488256 Mch9g1268 Mch-Chr9:14565197 0 dispersed
Mch2g1906 Mch-Chr2:19488256 Mch1g0911 Mch-Chr1:12431655 2.25E-212 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g1906 - - - 0.0