Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g1934 TTAACAGGAATCACTCCAACGGCGGAGAGCTTCAACGATAAAGGGTTTGGTCCTCGACCTTCGAAATGGAAAGGCACTTGTCAACACTTCGCCAATTTCTCCGGCTGCAACAACAAGCTTGTCGGAGCAAGATATTTCAAGCTCAACGGTGTCCCCGATCCAGTCGACATCTTATCGCCCATAGACGTGAGTGGCCATGGGACGCACACGGCCTCAACGGCTACGGGCAATGCAGTTCCTGAGGCTAGCCTCTTTGGTCTGGCCAAAGGAACTGCACGGAGTGCCGTTCCATCAGCCAGAGTCGCCATGTACAAGGTCTGCTGGACCACCACCGGATGCGCGGATATGGATATTCTGGCCGCCTTCGACGCAGCCATACAAGATGGCGTTGATATCATCTCGATATCGATTGCCGGTGGCGGGTTCGGGAATTACACCGAGGACGCTCTCTCCATCGGCGCGTTTCATGCCATGAGGAAGGGCATCCTCACCGTGGCTTCCGCCGGCAACACCGGCCCATCTGCCGGCAGCATTGTCAACCACGCGCCGTGGATCTTGACGGTGGCAGCCAGTGGGATCGATAGAAAATTTATCACCAGAGCGGGGTTGGGCAATGGGAAGAACATCTCTGGTATAGGAATAAACACATTCAATCCAAGTCAAGAACTATACCCTCTAGTGGATGGAGGTGATGCAGCGAGTAACTCAGGTAGCCAAGACAGTGCAAGCTTTTGCGCAGATGGGTCACTTGATCCAACAAAGGTGAAAGGAAGGCTTGTTTTGTGCAAAATGATGACTCCTGGCTCTGATTCTGTCGTCAAATTGCTTGGGGCTGATGGCACTATCATTCAAAATGATCAGTTTGTCGACCGTTCCCCAATCTTCATGGCCTCAGCCACCATGGTTTCTAGCTTTGTTGGTGCTTCTGTTGAAAGCTATATCAAATCCACAAGCTATCAATTTGTAGCACCAGAGGCAGTGATATACAAAACAAGTGAAGAGAAATCAAGAGCTCCATACGTGGCTGCCTTCTCCGCCAGAGGCCCAAACCCAGGCTCCAACCGCATTCTAAAGCCTGACATTGCAGCACCCGGAGTGGACATATTGGCGGCGTACACGCCACTGAAGTCGCTGACGGGGCTGAAGGGGGACACCCAATATTCAAAATTTACAATCATGTCCGGCATTTCCATGGCCTGCCCCCACGCTGCTGGAGCCGCCGCCTATGTCAAGTCTTTCCACACGGATTGGTCTCCTGCCGCCATTAGATCCGCCCTCGTCACCACCGCATGGACGATGAGCCAAGGAGTTAGCATGGAAGGGGAATTCGCGTACGGTGCCGGAAACATAAATCCAGCGAGGGCTGTAGATCCAGGCCTAATCTACGACGACAACGACATGTCGTACATCCACTTCCTCTGCAGCGAAGGCTATAGTGGCTCTTCAATCGCCATCCTCGCCGGACCAAAGCCCGTAACCTGCTCCTCTCTAGTCGGGCTCGGCCATGACTCGCTCAACTACCCAACCATTCAACTTAGTCTTCGAAGCACAAGACTGCCGATAATGACTGTCTTCCAACGACAAGTCACCAATGTCGGCCGAGCCGTCCCCATCTATATCGCCACCGTTGTAGCTCCTAAGGGGGTGGAGGTCACGGTGGATCCGGCAACTCTGTCCTTCGCACAGCTGCTGCAGAAACATACGTTCAAGGTGATTGTGAAGGCAAGTTCATTGCCGGCAGGGAAAATGGTATCTGGATTCTTGGCTTGGAAAGGCGTCGGCCATGTTGTCAGAAGCCCAATCGTCGTTTATAGTCCG 1818 53.08 LTGITPTAESFNDKGFGPRPSKWKGTCQHFANFSGCNNKLVGARYFKLNGVPDPVDILSPIDVSGHGTHTASTATGNAVPEASLFGLAKGTARSAVPSARVAMYKVCWTTTGCADMDILAAFDAAIQDGVDIISISIAGGGFGNYTEDALSIGAFHAMRKGILTVASAGNTGPSAGSIVNHAPWILTVAASGIDRKFITRAGLGNGKNISGIGINTFNPSQELYPLVDGGDAASNSGSQDSASFCADGSLDPTKVKGRLVLCKMMTPGSDSVVKLLGADGTIIQNDQFVDRSPIFMASATMVSSFVGASVESYIKSTSYQFVAPEAVIYKTSEEKSRAPYVAAFSARGPNPGSNRILKPDIAAPGVDILAAYTPLKSLTGLKGDTQYSKFTIMSGISMACPHAAGAAAYVKSFHTDWSPAAIRSALVTTAWTMSQGVSMEGEFAYGAGNINPARAVDPGLIYDDNDMSYIHFLCSEGYSGSSIAILAGPKPVTCSSLVGLGHDSLNYPTIQLSLRSTRLPIMTVFQRQVTNVGRAVPIYIATVVAPKGVEVTVDPATLSFAQLLQKHTFKVIVKASSLPAGKMVSGFLAWKGVGHVVRSPIVVYSP 606
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 20016660 20021103 + MC02g1447 Mch2g1934 682856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g1934 606 PRINTS Subtilisin serine protease family (S8) signature 62 75 IPR015500 -
Mch2g1934 606 PRINTS Subtilisin serine protease family (S8) signature 394 410 IPR015500 -
Mch2g1934 606 Pfam Subtilase family 60 446 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Mch2g1934 606 Gene3D - 473 605 - -
Mch2g1934 606 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 601 IPR045051 -
Mch2g1934 606 SUPERFAMILY Subtilisin-like 2 457 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Mch2g1934 606 Gene3D Peptidase S8/S53 domain 2 467 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Mch2g1934 606 Pfam Fibronectin type-III domain 505 603 IPR041469 -
Mch2g1934 606 CDD PA_subtilisin_like 203 318 - -
Mch2g1934 606 CDD Peptidases_S8_3 2 431 IPR034197 -
Mch2g1934 606 ProSiteProfiles Serine proteases, subtilase domain profile. 1 456 - -
Mch2g1934 606 Gene3D - 194 334 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g1934 Mch-Chr2:20016660 Mch9g1268 Mch-Chr9:14565197 0 dispersed
Mch2g1934 Mch-Chr2:20016660 Mch1g0911 Mch-Chr1:12431655 1.10E-179 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g1934 - - - 0.0