Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch2g1935 | ATGGACCCCGACTCATGGTGGCTTTTCACACTCCCTTACCTTCACCTTCTTGCTTCCCAAACTTCTACTATTTGGCTGTTCGGCTTCGCACTTCTCATCGTCGGCCTTCTCTCCTGGGCCTCCTCCGCCGGCGGCACTGCTTGGAACCAACTGGGCCGGGTTTCCATCCCCGGCCCGCGTGGCCTTCCCATATTCGGCACTCTATTCACTCTCACTCACGCCCGGCCCGGGTTGCCCCACCGCACCCTCGCCGCTATGGCACTCGCCCGACCCAACGCCACTCGGCTGATGGCTCTGACCCTCGGCTCCACCCCGCTGGTGGTGGCCTCCGACCCCACCACGGCCAAGGAAATCCTGACCTCCCCGCACTTCGCGGACCGCCCCCTGAAGCAGTCCGCCAGAAGCCTGGGCTTCGCGCGCGCCATCGGGTTCGCCCCCAACGCCACCTACTGGCGCCTCCTCCGAAGAATCGCCTCCTCCCACCTCTTCTCCCCGCGGCGTATTGCAGCCCACGAGGCCGGCCGCCAGCTCGAATGCGCCGCCATGCTCCTCTCCATACGCAACCAACAGAACCTCCACGGATTCGTCGCCCTCAGACAACACCTCCAACACGCCGCCTTGAACAACATCATGTCCACCGTCTTCGGCAGACGCTACGCCCACCACGACCCCCAACTTCAAGAGCTTCACCATTTGGTTCGAGAGGGATTCCAACTTCTTGGCGCCTTCAACTACTCCGATTATCTCCCATGGCTCGCTTCCTTCTACGACCCCTCTCGTATTAACCAACGCTGCGCCGCCCTCCTCCCACGAGTCTCTAAATTCGTCCGACCCATAATCAACGACCACCGCTCACGAATTCGCCCCAAGAACTTCTTGTCCGACGATTCCGATTTTGTTGACGTTCTTCTCTCTTTGGATGGCGACGAGAAGCTCGACGAAGATGACATGGTCGCTGTTCTATGGGAAATGATATTCAGAGGGACGGATACGACGGCGCTGCTTACGGAGTGGGTGATCGCGGAGTTGGTTTTGCACCCTGAGGTGCAGGAAGAAATTGGGAGAGAAATTGAAGAAGTTGTGGGTGACGGAAGTGGCCTCACGGACGCTGACGTGGCGAAGCTGCCTTACTTACAGGCGGTGGTGAAGGAGACGCTGCGGCTGCATCCGCCGGGCCCACTGCTGTCGTGGGCCCGGCTGTCGTCGTCGGACGTGCAGCTCAGCAACGGCATGCTTATCCCGGAGAACACGACCGCCATGGTCAACATGTGGGCCATCACGCACGACCCGCACGTGTGGGAGGCCCCACACGAGTTCCGGCCGGGCAGGTTCCTGGGCGCCGACGTGGACGTGAGAGGCGGCGATCTGCGGCTGGCGCCGTTCGGGGCAGGGCGGAGGGTGTGCCCGGGGAAGAACATGGCGATGGCCACCGTCACGCTGTGGGTGGCGAAGATGGTCCGTCACTTCAAGTGGGCCCCACACCCGGGACGACCTGTCGACCTCACCGAACTCCTCAACCTCTCCTGTGAGATGAAGAATCCTCTGCATGCACTCGCACTGCAAACGCGTCCACTCTAG | 1578 | 61.66 | MDPDSWWLFTLPYLHLLASQTSTIWLFGFALLIVGLLSWASSAGGTAWNQLGRVSIPGPRGLPIFGTLFTLTHARPGLPHRTLAAMALARPNATRLMALTLGSTPLVVASDPTTAKEILTSPHFADRPLKQSARSLGFARAIGFAPNATYWRLLRRIASSHLFSPRRIAAHEAGRQLECAAMLLSIRNQQNLHGFVALRQHLQHAALNNIMSTVFGRRYAHHDPQLQELHHLVREGFQLLGAFNYSDYLPWLASFYDPSRINQRCAALLPRVSKFVRPIINDHRSRIRPKNFLSDDSDFVDVLLSLDGDEKLDEDDMVAVLWEMIFRGTDTTALLTEWVIAELVLHPEVQEEIGREIEEVVGDGSGLTDADVAKLPYLQAVVKETLRLHPPGPLLSWARLSSSDVQLSNGMLIPENTTAMVNMWAITHDPHVWEAPHEFRPGRFLGADVDVRGGDLRLAPFGAGRRVCPGKNMAMATVTLWVAKMVRHFKWAPHPGRPVDLTELLNLSCEMKNPLHALALQTRPL | 525 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 20037634 | 20039683 | + | MC02g1448 | Mch2g1935 | 682857 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch2g1935 | 525 | Gene3D | Cytochrome P450 | 50 | 521 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1935 | 525 | PRINTS | P450 superfamily signature | 327 | 344 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1935 | 525 | PRINTS | P450 superfamily signature | 380 | 391 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1935 | 525 | PRINTS | P450 superfamily signature | 459 | 468 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1935 | 525 | PRINTS | P450 superfamily signature | 468 | 479 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1935 | 525 | PANTHER | CYTOCHROME P450 78A7-RELATED | 3 | 517 | IPR051996 | - | |
| Mch2g1935 | 525 | FunFam | Cytochrome P450 78A5 | 48 | 522 | - | - | |
| Mch2g1935 | 525 | PRINTS | E-class P450 group I signature | 379 | 397 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1935 | 525 | PRINTS | E-class P450 group I signature | 205 | 223 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1935 | 525 | PRINTS | E-class P450 group I signature | 336 | 362 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1935 | 525 | PRINTS | E-class P450 group I signature | 468 | 491 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1935 | 525 | PRINTS | E-class P450 group I signature | 90 | 109 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1935 | 525 | PRINTS | E-class P450 group I signature | 458 | 468 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1935 | 525 | PRINTS | E-class P450 group I signature | 422 | 446 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1935 | 525 | PRINTS | E-class P450 group I signature | 316 | 333 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1935 | 525 | Pfam | Cytochrome P450 | 57 | 501 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch2g1935 | 525 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 461 | 470 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Mch2g1935 | 525 | SUPERFAMILY | Cytochrome P450 | 56 | 518 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch2g1935 | Mch-Chr2:20037634 | Mch7g0520 | Mch-Chr7:8838912 | 7.36E-149 | dispersed | |
| Mch2g1935 | Mch-Chr2:20037634 | Mch8g0146 | Mch-Chr8:907537 | 7.46E-151 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch2g1935 | K20619 | - | csv:101214099 | 702.975 |