Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch3g0029 ATGGCCACTTCAAATATTGCAGCCTCTTGCAAAATGGCCATGATATTGTCGTTGGCTCTGATGGGGGCTTTTGGCATGCCAGCGGCAGGCAGCTCCTCAGCTCAACTCTCCACAAACTTTTACCGCCGAAACTGCCCTCAGCTCCTCTCCACTGTCAAATCCATCCTTAAATCTCATATCTCGAAGGAACGCCGCATGGGAGCTTCACTCCTCTGTCTCCACTTCCACGACTGCTTCGTCAACGGGTGCGATGGATCGGTGCTCCTAGAGGACAGAGGGTGGTTCAGAGGGGAGCATACCGCAGCTCCCAACAACAATTCACTCAGAGGTTTCAATGTGATTGATAAGATTAAGTCTAGAGTTGAGAAGCTGTGTCTTGGCGTGGTGTCGTGTGTTGACATCCTGACGATCGCTGCTCGTGATTCGGTTGCACTTCTGGGAGGGCCCCATTGGGACGTTAAACTTGGGCGAAGAGACTCCAAAACAGCAAGCTTTTCTGATGCCAACAGCGGAGTCCTTCCTGCACCCTCCTCCCCTCTCTCCCTTCTCATCTCAAGCTTTAAAGATCAGGGCCTTTCCATCACTGGCTTGGTTGCTTTGTCCGGTGCGCATACAATTGGAGTGGCAAGATGCGGGACGTTCAGAAGTCGTATATACGAAGGGAGAAATATTGATGGTTTATTTGCAAAGAAGAGACAGCAGCAATGTCCGAGAAGGGAGGGGTCAGGCGACAACAATCTCGCTCCCTTCGACATCCAAACGCCCATGCTTTTCGACAACAACTACTTCGGCAACCTTATTAAGAAGAAGGGTCTGCTCCACTCCGACCAGGTGGTGTTCTCCGGTGGGCCCACCGCATCTCTGGTCAGAAAGTACAGCACAACCAGTGGGGCTTTCAATCGGGACTTTGTTAGAGCCATGATTAAGATGGGAGATATCAAACCCCTCACTGGCTCCAAGGGAGAGATTAGAAAAGTGTGTGGGAAGCCCAATTAA 996 51.1 MATSNIAASCKMAMILSLALMGAFGMPAAGSSSAQLSTNFYRRNCPQLLSTVKSILKSHISKERRMGASLLCLHFHDCFVNGCDGSVLLEDRGWFRGEHTAAPNNNSLRGFNVIDKIKSRVEKLCLGVVSCVDILTIAARDSVALLGGPHWDVKLGRRDSKTASFSDANSGVLPAPSSPLSLLISSFKDQGLSITGLVALSGAHTIGVARCGTFRSRIYEGRNIDGLFAKKRQQQCPRREGSGDNNLAPFDIQTPMLFDNNYFGNLIKKKGLLHSDQVVFSGGPTASLVRKYSTTSGAFNRDFVRAMIKMGDIKPLTGSKGEIRKVCGKPN 331
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 308572 310180 - MC03g_new0007 Mch3g0029 682932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch3g0029 331 CDD secretory_peroxidase 35 329 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Mch3g0029 331 Gene3D Peroxidase, domain 2 174 310 - -
Mch3g0029 331 FunFam Peroxidase 174 310 - -
Mch3g0029 331 Gene3D - 39 327 - -
Mch3g0029 331 PANTHER PEROXIDASE 72-RELATED 17 329 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g0029 331 SUPERFAMILY Heme-dependent peroxidases 35 331 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g0029 331 Pfam Peroxidase 52 293 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g0029 331 FunFam Peroxidase 39 178 - -
Mch3g0029 331 ProSiteProfiles Plant heme peroxidase family profile. 35 331 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g0029 331 PRINTS Plant peroxidase signature 147 162 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g0029 331 PRINTS Plant peroxidase signature 195 207 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g0029 331 PRINTS Plant peroxidase signature 128 138 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g0029 331 PRINTS Plant peroxidase signature 249 264 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g0029 331 PRINTS Plant peroxidase signature 69 89 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g0029 331 PRINTS Plant peroxidase signature 109 122 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g0029 331 PRINTS Plant peroxidase signature 265 282 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g0029 331 PRINTS Plant peroxidase signature 45 64 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g0029 331 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g0029 331 PRINTS Haem peroxidase superfamily signature 251 266 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g0029 331 PRINTS Haem peroxidase superfamily signature 196 211 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g0029 331 PRINTS Haem peroxidase superfamily signature 67 81 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g0029 331 PRINTS Haem peroxidase superfamily signature 147 159 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch3g0029 331 PRINTS Haem peroxidase superfamily signature 129 146 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0799 Mch-Chr2:5500397 Mch3g0029 Mch-Chr3:308572 7.90E-137 dispersed
Mch2g0800 Mch-Chr2:5507204 Mch3g0029 Mch-Chr3:308572 1.55E-135 dispersed
Mch3g0029 Mch-Chr3:308572 Mch4g2473 Mch-Chr4:25560499 5.90E-130 dispersed
Mch3g0029 Mch-Chr3:308572 Mch3g0030 Mch-Chr3:330819 1.59E-100 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch3g0029 K00430 - mdm:103418409 425.246