Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch3g0050 GAGGAGAAGCTGCTGGCTATGGCGCGCCACATAGCCAAGACCATGGGCCGTAACGAGTCCATGGCCGATGATATTTTCCAGATTTTCTCCAATTTCGATGCTAGGTTTTCCCTCGATAAGTTGTCTGATAAGGTCGATGAGGTTGATCCCAGAGGCTCCGCCGCCTTGCACCGCACTCTCAAGTCTCTCGACCGCCGGATCTCCCAATACTTGGCCGCCGACCACCCGATTTGGGCCGACTCCGCCGATTCCTCTGCTTTTCTCGACGCCATCGATGAGTTGATGGCCACCATTAGGGACTGGACCCCCATGGCCAGGGATAACACCGTCGGCTCCTACCTCGCCCGCGCCGACGATCTGATGCACCAGGCGATGTTCCGCGTCGATGAAGAGTTCCGCTCGTTGATGGAGCGCGGTGGTGAGTCTTTTGAACTCACTCGCCATTTCAGGAACGGCGAGTCAACGGGCGATTTCTCCTTCGATTCTGAAGAGGATGAGGAAGCTACGGAGGGGATTCTTGGCGACTGCGACGGTCACCAGATTCCGGTGGCGCAGCCGGTTACGGACTACAACATTGTGATCGATGCGCTCCCGTCGGGGACTCTCAGCGATCTCCACGAGATAGCGAAGCGTATGGTGGCGGCCGGGTTCGAGAAGGAGTGTTCGCACGCTTACAGTAGCTGCAGGAGGGAGTTCCTGGAGGAGAGTCTTTCTAGGTTGGGGTTACAGAAGCTGAGCATCGATGAGGTTCAGAAATTGCCATGGCAGGACCTTGAGGAGGAGATTGAGCGCTGGATGAAGGCGATTACCGTCTCCCTCCGAATCCTCTTCCCAAGCGAAAGACGCCTCTGCGACCGCGTCTTCTTCGGCCTCTCCTCTGCCGCCCATCTCTCTTTCATGGACGTCTGCCGAGGATCAACGATTCAGCTATTGAATTTTGCAGATGCGGTAGCAATTGGCTCGCGCGCACCGGAACGGCTGTTCAAAATCCTCGACATGTTCGAGACCTTCAGAGACTTGATGCCGGAATTGGACTCGGTGTTTTCGGACCAGTACTGTTTATTGCTTAGAAACGAAGCAATTACAATCTGGAAAAGGTTGGGCCAAACAATCAAGGGGATCTTCATGGAGCTTGAGAATTTGATCCGTCGTGATCCTGCGAAAACTCCAGTGCCGGCCGGCGGGCTTCATCCAATTACTCGATATGTGATGAATTATCTACGAGCAGCCTGTCGGTCGCGGCTAACTCTGGAGCAAGTTTTCGAAGAAACCGCTCTTCCCTCCAAGGATTACACCAAGCTGGAGGACAGAGCAGCAGCATCGTCTTCGTTATCGGTTCAAATGGACTGGATTATGGAGCTTCTAGAGAGCAATTTAGAGGCGAAGTCGAAGATATACAAGGATCTTTCCTTAAGCTCTGTGTTTCTGATGAACAACGGCAGATACATTGTTCAGAAAGTGAAAGACAGTGAATTAGGATCACTTTTAGGCGACGATTGGATTCGAAAACACTCGGTGAAGAGCCGGCAATACCTCGGGAATTACCTGAAAAGCTCATGGAGCAAGGTGGTCGGAGTATTGAAAACGGACAGTGGCTCGTTAGCTCCAAGCGCCGCCACAATGAAAGAGAAGCTCAAATCATTCAACTTGCAGTTTGAAGAAATCTGCAAAACCCAATCCACATGGGTAATATTCGAGCATCAGCTCAGAGAGGAAGCAAGAATCTCGGTGGCCAAAATCCTGATTCCGGCCTACCAAAACTTCATTGCAAGGTACCAGAGTTTGCCGGAGTTGGCAAAGCGTACAGACCGGCATTTGAAGTACACGGCGGAGGACGTGGAAGCTCGGATCACCAAGTTGTTCGAAGGA 1869 52.43 EEKLLAMARHIAKTMGRNESMADDIFQIFSNFDARFSLDKLSDKVDEVDPRGSAALHRTLKSLDRRISQYLAADHPIWADSADSSAFLDAIDELMATIRDWTPMARDNTVGSYLARADDLMHQAMFRVDEEFRSLMERGGESFELTRHFRNGESTGDFSFDSEEDEEATEGILGDCDGHQIPVAQPVTDYNIVIDALPSGTLSDLHEIAKRMVAAGFEKECSHAYSSCRREFLEESLSRLGLQKLSIDEVQKLPWQDLEEEIERWMKAITVSLRILFPSERRLCDRVFFGLSSAAHLSFMDVCRGSTIQLLNFADAVAIGSRAPERLFKILDMFETFRDLMPELDSVFSDQYCLLLRNEAITIWKRLGQTIKGIFMELENLIRRDPAKTPVPAGGLHPITRYVMNYLRAACRSRLTLEQVFEETALPSKDYTKLEDRAAASSSLSVQMDWIMELLESNLEAKSKIYKDLSLSSVFLMNNGRYIVQKVKDSELGSLLGDDWIRKHSVKSRQYLGNYLKSSWSKVVGVLKTDSGSLAPSAATMKEKLKSFNLQFEEICKTQSTWVIFEHQLREEARISVAKILIPAYQNFIARYQSLPELAKRTDRHLKYTAEDVEARITKLFEG 623
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 528490 530358 - MC03g0039 Mch3g0050 682953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch3g0050 623 PANTHER EXOCYST COMPLEX PROTEIN EXO70 47 623 IPR004140 GO:0000145(InterPro)|GO:0000145(PANTHER)|GO:0006887(InterPro)|GO:0006887(PANTHER)
Mch3g0050 623 Gene3D Exocyst complex component Exo70 77 623 - -
Mch3g0050 623 Pfam Exocyst complex component Exo70 N-terminal 60 137 - -
Mch3g0050 623 SUPERFAMILY Cullin repeat-like 78 622 IPR016159 -
Mch3g0050 623 Pfam Exo70 exocyst complex subunit C-terminal 264 618 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Mch3g0050 623 FunFam Exocyst subunit Exo70 family protein 71 623 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g0050 Mch-Chr3:528490 Mch4g1670 Mch-Chr4:19888351 2.75E-118 dispersed
Mch3g0050 Mch-Chr3:528490 Mch3g1347 Mch-Chr3:16160475 4.03E-122 transposed
Mch3g0050 Mch-Chr3:528490 Mch6g0064 Mch-Chr6:380659 3.14E-122 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch3g0050 K07195 - csv:101204511 1075.85