Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch3g0069 ATGTCGACGAGCGAGAACGGCGAACTGGTCTGCGTCACCGGTGGCAGCGGCTGCATCGGATCCTGGCTCGTTCACCTCCTCCTCCGCCGTGGCTACTCCGTTCACGCCACCGTCCAAAATCTCAAGGATGACAAAGAAACGAAGCATCTCGAAGATTTGGAAGGCGCGGACACTCGTCTCCGTCTCTTCCAAATCGATCTCCTCCATTATTACTCCATCGTCCCCGCCGTCACTGGTTGCGCCGGCGTCTTCCACCTCGCGTCTCCCTGCATCGTCGATGCTGTAGAAGATCCTGAGGTGGATCTATTGGATCCGGCCATCAAAGGAACCCTCAATGTCCTGACCGCGGCTAAGGAGGCTGGGGTACAACGCGTGGTGGTGACTTCGTCTATCTCCGCCATGATTCCAAACCCTCACTGGCCGGCGAACGTTGTGAGAAATGAAGAATGCTGGACTGATATAGATTACTGCAAGTCAAAGGGGCTATGGTATTCGGTTTCAAAAACTCTAGCGGAAAAGGCTGCTTGGGAATTTTCCAAGGAGAAAGGATTGGATGTGGTGGTGATTAATCCAGGCACTGTGATGGGGCCTTTGATTCCTCCCAGAATTAACGCTAGCATGAAAATGCTTTTACAACTTCTCGAGGGGTGCTCCGAGACATTCGAGGACGTCTTTATCGGGATAGTGCACTTTAAAGACGTTGCCTTAGCACACATTTTGGTGTATGAAAACAAATCAGCTACAGGAAGGCACTTTTGTGCCGAGTCTATATCTCGTTACTCCGACTATGCCGCAAAGGTTGCTGAGCTCTACCCTCAATATAAGGTGCCCAGGTCGATAGAAGATACACAGCCTGATTTGGTGAGAGCCAAAGATGGAGCTAAGAAGCTGATGGACCTGGGGATGAAATTCATCCCAATGGAAGAAATCATCAAGGACGCGGTTGAGGATTTAAAGAGGAAGGGATATATTTCCGAACCACTATAA 987 50.46 MSTSENGELVCVTGGSGCIGSWLVHLLLRRGYSVHATVQNLKDDKETKHLEDLEGADTRLRLFQIDLLHYYSIVPAVTGCAGVFHLASPCIVDAVEDPEVDLLDPAIKGTLNVLTAAKEAGVQRVVVTSSISAMIPNPHWPANVVRNEECWTDIDYCKSKGLWYSVSKTLAEKAAWEFSKEKGLDVVVINPGTVMGPLIPPRINASMKMLLQLLEGCSETFEDVFIGIVHFKDVALAHILVYENKSATGRHFCAESISRYSDYAAKVAELYPQYKVPRSIEDTQPDLVRAKDGAKKLMDLGMKFIPMEEIIKDAVEDLKRKGYISEPL 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 772385 775244 + MC03g0057 Mch3g0069 682972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch3g0069 328 FunFam Cinnamoyl-CoA reductase 1 3 327 - -
Mch3g0069 328 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 10 316 IPR050425 GO:0016616(PANTHER)
Mch3g0069 328 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 318 IPR036291 -
Mch3g0069 328 Gene3D - 1 327 - -
Mch3g0069 328 Pfam NAD dependent epimerase/dehydratase family 10 250 IPR001509 -
Mch3g0069 328 CDD FR_SDR_e 10 301 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0601 Mch-Chr10:4069331 Mch3g0069 Mch-Chr3:772385 9.43E-109 dispersed
Mch3g0069 Mch-Chr3:772385 Mch8g1069 Mch-Chr8:7565343 6.06E-93 dispersed
Mch3g0069 Mch-Chr3:772385 Mch9g0463 Mch-Chr9:3434303 2.44E-92 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch3g0069 - - - 0.0